FFCP PHASE1:Hg19::chrX:153095959..153095971,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57595 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21167 | |||
|TSSclassifier=strong | |||
|UniProt=Q76G19 | |||
|association_with_transcript=-14bp_to_ENST00000164640_5end | |||
|cluster_id=chrX:153095959..153095971,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_10_at_PDZD4_5end | |||
|id=chrX:153095959..153095971,- | |||
|ontology_enrichment_celltype=CL:0000540!4.13e-16!6;CL:0000031!4.13e-16!6;CL:0000404!4.13e-16!6;CL:0000047!6.49e-16!8;CL:0002322!7.00e-14!5;CL:0002319!9.05e-13!25;CL:0000133!4.22e-10!59;CL:0000221!1.14e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.56e-48;6!CL:0000404;1.56e-48;6!CL:0000039;1.23e-23;7!CL:0000586;1.23e-23;7!CL:0002319;3.93e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.08e-48,6;CL:0000031,1.08e-48,6;CL:0000404,1.08e-48,6;CL:0000047,1.14e-36,8;CL:0000039,1.33e-23,7;CL:0000586,1.33e-23,7;CL:0002319,3.63e-11,25 | |||
|ontology_enrichment_development_v019=CL:0000031;1.56e-48;6!UBERON:0009117;9.04e-17;10!UBERON:0005564;9.04e-17;10 | |||
|ontology_enrichment_disease=DOID:3095!4.75e-08!22;DOID:2994!4.75e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.27e-13;22!DOID:2994;2.27e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.27e-13,22;DOID:2994,2.27e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!6.23e-47!82;UBERON:0000073!1.49e-45!94;UBERON:0001016!1.49e-45!94;UBERON:0005743!3.22e-44!86;UBERON:0001049!3.38e-36!57;UBERON:0005068!3.38e-36!57;UBERON:0006241!3.38e-36!57;UBERON:0007135!3.38e-36!57;UBERON:0000955!1.02e-33!69;UBERON:0006238!1.02e-33!69;UBERON:0002616!3.03e-32!59;UBERON:0001893!1.47e-29!34;UBERON:0002020!1.52e-29!34;UBERON:0003528!1.52e-29!34;UBERON:0002780!1.44e-28!41;UBERON:0001890!1.44e-28!41;UBERON:0006240!1.44e-28!41;UBERON:0002791!8.07e-28!33;UBERON:0003080!9.71e-28!42;UBERON:0001869!5.08e-26!32;UBERON:0003075!3.48e-24!86;UBERON:0007284!3.48e-24!86;UBERON:0002346!1.08e-22!90;UBERON:0004121!3.59e-21!169;UBERON:0000924!2.14e-20!173;UBERON:0006601!2.14e-20!173;UBERON:0003056!1.00e-18!61;UBERON:0007023!6.99e-17!115;UBERON:0000956!1.07e-16!25;UBERON:0000203!1.07e-16!25;UBERON:0002308!7.21e-16!9;UBERON:0000125!7.21e-16!9;UBERON:0000033!6.61e-15!123;UBERON:0002619!3.01e-14!22;UBERON:0000153!8.48e-14!129;UBERON:0007811!8.48e-14!129;UBERON:0001950!1.62e-13!20;UBERON:0002420!4.65e-12!9;UBERON:0007245!4.65e-12!9;UBERON:0010009!4.65e-12!9;UBERON:0010011!4.65e-12!9;UBERON:0000454!4.65e-12!9;UBERON:0009663!7.59e-12!7;UBERON:0002298!1.26e-10!8;UBERON:0003076!1.78e-09!15;UBERON:0003057!1.78e-09!15;UBERON:0000200!2.15e-09!6;UBERON:0004733!2.23e-09!12;UBERON:0002028!2.23e-09!12;UBERON:0007277!2.23e-09!12;UBERON:0004732!1.44e-08!13;UBERON:0000988!3.83e-08!3;UBERON:0000473!3.92e-08!8;UBERON:0006331!1.16e-07!3;UBERON:0002771!1.57e-07!3;UBERON:0000025!4.34e-07!194;UBERON:0001871!4.56e-07!7;UBERON:0002680!9.17e-07!9;UBERON:0001895!9.17e-07!9;UBERON:0010092!9.17e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.88e-21;8!UBERON:0003135;2.61e-15;11!UBERON:0001875;2.99e-10;2!UBERON:0006514;2.99e-10;2!UBERON:0000991;2.57e-08;21!UBERON:0003101;5.79e-08;22!UBERON:0000079;5.79e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.50e-21,8;UBERON:0003135,2.74e-15,11;UBERON:0001875,3.58e-10,2;UBERON:0006514,3.58e-10,2;UBERON:0000991,2.64e-08,21;UBERON:0009196,2.64e-08,21;UBERON:0009117,2.64e-08,21;UBERON:0005564,2.64e-08,21;UBERON:0004176,5.93e-08,22;UBERON:0003101,5.93e-08,22;UBERON:0000079,5.93e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31750041646231,0.795178609928912,0.929551542956147,0.725627385107593,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0.508189248444927,0,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84991942105343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0.520874984799877,0,0.482385754501632,0,0.442317039724898,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.337005664903385,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,4.82259445395058,6.73943239326446,2.9080823662043,0,0,0.242998226632099,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.52893040697076,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0,0.248385611765534,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0.553033744606923,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.383683113910955,0.862598491173454,0,0.218419276384028,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0.205116364240755,0.756215088665154,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.679697329768317,0.131545547125698,0,0,0,0.314231179832004,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0.436350690340377,0,0,0,0,0,0.218531143927391,1.39368351112581,2.34574308406558,1.3360870263278,1.28652859348783,0.50141507858475,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@PDZD4 | |||
}} |
Latest revision as of 00:59, 20 September 2015
Short description: | p10@PDZD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PDZD4_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -14bp_to_ENST00000164640_5end |
EntrezGene: | PDZD4 |
HGNC: | 21167 |
UniProt: | Q76G19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.08e-48 | 6 |
neuroblast | 1.08e-48 | 6 |
electrically signaling cell | 1.08e-48 | 6 |
neuronal stem cell | 1.14e-36 | 8 |
germ line cell | 1.33e-23 | 7 |
germ cell | 1.33e-23 | 7 |
neural cell | 3.63e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
testis | 9.50e-21 | 8 |
male reproductive organ | 2.74e-15 | 11 |
globus pallidus | 3.58e-10 | 2 |
pallidum | 3.58e-10 | 2 |
gonad | 2.64e-08 | 21 |
indifferent external genitalia | 2.64e-08 | 21 |
indifferent gonad | 2.64e-08 | 21 |
gonad primordium | 2.64e-08 | 21 |
external genitalia | 5.93e-08 | 22 |
male organism | 5.93e-08 | 22 |
male reproductive system | 5.93e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.27e-13 | 22 |
germ cell cancer | 2.27e-13 | 22 |