FFCP PHASE1:Hg19::chrX:152990302..152990319,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=215 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=61 | |||
|TSSclassifier=strong | |||
|UniProt=P33897 | |||
|association_with_transcript=-3bp_to_ENST00000218104,NM_000033,uc004fif.2_5end | |||
|cluster_id=chrX:152990302..152990319,+ | |||
|description=CAGE_peak_1_at_ABCD1_5end | |||
|id=chrX:152990302..152990319,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.28e-32!65;CL:0000766!1.38e-32!76;CL:0002194!2.37e-32!63;CL:0000576!2.37e-32!63;CL:0000040!2.37e-32!63;CL:0000559!2.37e-32!63;CL:0000557!1.81e-31!71;CL:0000839!5.21e-28!70;CL:0000860!5.15e-27!45;CL:0000763!8.43e-27!112;CL:0000049!8.43e-27!112;CL:0002057!1.06e-25!42;CL:0000048!2.34e-15!430;CL:0002320!8.61e-14!365;CL:0000134!2.11e-13!358;CL:0000723!2.62e-13!436;CL:0000219!8.04e-13!390;CL:0000738!4.39e-12!140;CL:0000034!8.99e-12!444;CL:0000037!9.08e-12!172;CL:0000566!9.08e-12!172;CL:0002032!3.31e-11!165;CL:0000837!3.31e-11!165;CL:0000988!8.76e-11!182;CL:0002087!3.40e-10!119;CL:0002371!2.85e-09!591;CL:0002031!4.57e-09!124;CL:0000144!9.83e-09!625;CL:0000548!2.22e-07!679;CL:0000004!2.22e-07!679;CL:0000255!2.22e-07!679;CL:0000012!2.54e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.63e-20;33!CL:0002057;5.63e-20;33!CL:0000473;1.29e-19;39!CL:0000234;1.29e-19;39!CL:0000576;2.99e-17;48!CL:0000766;1.03e-13;69!CL:0000763;3.84e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.84e-31,61;CL:0000766,2.60e-31,72;CL:0002194,3.30e-31,59;CL:0000576,3.30e-31,59;CL:0000040,3.30e-31,59;CL:0000559,3.30e-31,59;CL:0000557,3.25e-30,67;CL:0000473,3.43e-29,48;CL:0000234,3.43e-29,48;CL:0000839,8.46e-27,66;CL:0000860,1.05e-25,42;CL:0002057,1.05e-25,42;CL:0000763,1.59e-25,108;CL:0000049,1.59e-25,108;CL:0000048,1.29e-14,427;CL:0002320,5.49e-13,361;CL:0000134,1.30e-12,354;CL:0000723,1.38e-12,433;CL:0000219,5.04e-12,386;CL:0000738,4.14e-11,136;CL:0000034,4.34e-11,441;CL:0000037,7.27e-11,168;CL:0002032,2.57e-10,161;CL:0000837,2.57e-10,161;CL:0000988,5.46e-10,177;CL:0002087,2.82e-09,115;CL:0002031,3.30e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;9.03e-19;42!CL:0000049;5.72e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.12e-28!216;UBERON:0002371!5.25e-28!80;UBERON:0001474!1.20e-25!86;UBERON:0002390!2.78e-25!102;UBERON:0003061!2.78e-25!102;UBERON:0002405!3.07e-25!115;UBERON:0002204!2.74e-23!167;UBERON:0002193!8.28e-23!112;UBERON:0004765!2.81e-20!101;UBERON:0001434!2.81e-20!101;UBERON:0000926!2.92e-16!448;UBERON:0004120!2.92e-16!448;UBERON:0006603!2.92e-16!448;UBERON:0002384!3.89e-14!375;UBERON:0003914!3.42e-08!118;UBERON:0001637!4.19e-08!42;UBERON:0003509!4.19e-08!42;UBERON:0004572!4.19e-08!42;UBERON:0004573!5.32e-07!33;UBERON:0004571!5.32e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.68e-28,203;UBERON:0002371,1.03e-26,76;UBERON:0001474,2.36e-24,82;UBERON:0002390,5.93e-24,98;UBERON:0003061,5.93e-24,98;UBERON:0002405,1.59e-22,93;UBERON:0002204,4.68e-22,167;UBERON:0004765,9.00e-22,90;UBERON:0002193,1.62e-21,108;UBERON:0000926,4.04e-20,315;UBERON:0004120,4.04e-20,315;UBERON:0006603,4.04e-20,315;UBERON:0001434,8.81e-19,100;UBERON:0002384,2.59e-13,371;UBERON:0001637,4.18e-08,42;UBERON:0003509,4.18e-08,42;UBERON:0004572,4.18e-08,42;UBERON:0003914,4.30e-08,117;UBERON:0004573,5.32e-07,33;UBERON:0004571,5.32e-07,33 | |||
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| |||
|short_description=p1@ABCD1 | |||
}} |
Latest revision as of 00:42, 20 September 2015
Short description: | p1@ABCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABCD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000218104, NM_000033, uc004fif.2_5end |
EntrezGene: | ABCD1 |
HGNC: | 61 |
UniProt: | P33897 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.84e-31 | 61 |
myeloid leukocyte | 2.60e-31 | 72 |
monopoietic cell | 3.30e-31 | 59 |
monocyte | 3.30e-31 | 59 |
monoblast | 3.30e-31 | 59 |
promonocyte | 3.30e-31 | 59 |
granulocyte monocyte progenitor cell | 3.25e-30 | 67 |
defensive cell | 3.43e-29 | 48 |
phagocyte | 3.43e-29 | 48 |
myeloid lineage restricted progenitor cell | 8.46e-27 | 66 |
classical monocyte | 1.05e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-25 | 42 |
myeloid cell | 1.59e-25 | 108 |
common myeloid progenitor | 1.59e-25 | 108 |
multi fate stem cell | 1.29e-14 | 427 |
connective tissue cell | 5.49e-13 | 361 |
mesenchymal cell | 1.30e-12 | 354 |
somatic stem cell | 1.38e-12 | 433 |
motile cell | 5.04e-12 | 386 |
leukocyte | 4.14e-11 | 136 |
stem cell | 4.34e-11 | 441 |
hematopoietic stem cell | 7.27e-11 | 168 |
hematopoietic oligopotent progenitor cell | 2.57e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.57e-10 | 161 |
hematopoietic cell | 5.46e-10 | 177 |
nongranular leukocyte | 2.82e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 3.30e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.68e-28 | 203 |
bone marrow | 1.03e-26 | 76 |
bone element | 2.36e-24 | 82 |
hematopoietic system | 5.93e-24 | 98 |
blood island | 5.93e-24 | 98 |
immune system | 1.59e-22 | 93 |
musculoskeletal system | 4.68e-22 | 167 |
skeletal element | 9.00e-22 | 90 |
hemolymphoid system | 1.62e-21 | 108 |
mesoderm | 4.04e-20 | 315 |
mesoderm-derived structure | 4.04e-20 | 315 |
presumptive mesoderm | 4.04e-20 | 315 |
skeletal system | 8.81e-19 | 100 |
connective tissue | 2.59e-13 | 371 |
artery | 4.18e-08 | 42 |
arterial blood vessel | 4.18e-08 | 42 |
arterial system | 4.18e-08 | 42 |
epithelial tube | 4.30e-08 | 117 |
systemic artery | 5.32e-07 | 33 |
systemic arterial system | 5.32e-07 | 33 |