FFCP PHASE1:Hg19::chrX:152774081..152774113,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=633 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1044 | |||
|TSSclassifier=strong | |||
|UniProt=P21810 | |||
|association_with_transcript=205bp_to_U11686_5end | |||
|cluster_id=chrX:152774081..152774113,+ | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_5_at_BGN_5end | |||
|id=chrX:152774081..152774113,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.33e-24!180;CL:0000057!6.74e-14!75;CL:0000183!3.30e-13!59;CL:0000359!6.56e-13!32;CL:0000187!3.37e-12!54;CL:0000680!2.19e-11!57;CL:0000056!2.19e-11!57;CL:0000355!2.19e-11!57;CL:0000192!6.01e-11!42;CL:0000514!6.01e-11!42;CL:0000393!2.03e-10!60;CL:0000211!2.03e-10!60;CL:0000222!6.67e-09!119;CL:0002334!2.53e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.18e-12;32!CL:0000327;2.34e-08;15!CL:0002334;6.17e-08;12!CL:0000499;1.52e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.16e-16,76;CL:0000359,1.40e-12,32;CL:0000187,1.49e-09,55;CL:0000680,3.99e-09,58;CL:0000056,3.99e-09,58;CL:0000355,3.99e-09,58;CL:0000327,2.31e-08,15;CL:0000048,3.20e-08,427;CL:0000393,3.40e-08,61;CL:0000211,3.40e-08,61;CL:0002334,5.59e-08,12;CL:0000192,7.49e-08,43;CL:0000514,7.49e-08,43;CL:0000723,1.27e-07,433;CL:0000499,2.19e-07,28;CL:0000222,5.53e-07,121;CL:0000034,7.14e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.91e-23!84;UBERON:0002049!1.71e-20!79;UBERON:0007798!1.71e-20!79;UBERON:0000055!1.46e-18!69;UBERON:0001981!2.09e-18!60;UBERON:0007500!2.09e-18!60;UBERON:0004537!2.09e-18!60;UBERON:0006965!2.09e-18!60;UBERON:0001637!1.03e-17!42;UBERON:0003509!1.03e-17!42;UBERON:0004572!1.03e-17!42;UBERON:0001009!1.69e-17!113;UBERON:0004535!6.31e-17!110;UBERON:0004573!1.44e-14!33;UBERON:0004571!1.44e-14!33;UBERON:0003914!2.06e-13!118;UBERON:0000477!5.50e-13!286;UBERON:0002385!1.16e-11!63;UBERON:0001015!1.16e-11!63;UBERON:0000383!1.16e-11!63;UBERON:0001134!1.38e-11!61;UBERON:0002036!1.38e-11!61;UBERON:0003082!1.38e-11!61;UBERON:0004111!2.13e-11!241;UBERON:0000914!8.39e-11!83;UBERON:0002329!8.39e-11!83;UBERON:0003077!8.39e-11!83;UBERON:0003059!8.39e-11!83;UBERON:0007282!8.39e-11!83;UBERON:0009618!8.39e-11!83;UBERON:0007285!8.39e-11!83;UBERON:0000025!1.41e-10!194;UBERON:0004290!3.69e-10!70;UBERON:0000475!3.79e-10!365;UBERON:0007100!3.95e-09!27;UBERON:0000947!6.12e-09!21;UBERON:0010191!6.12e-09!21;UBERON:0000948!1.10e-08!24;UBERON:0005498!1.10e-08!24;UBERON:0004140!1.10e-08!24;UBERON:0009881!1.10e-08!24;UBERON:0004141!1.10e-08!24;UBERON:0003084!1.10e-08!24;UBERON:0007005!1.10e-08!24;UBERON:0004139!1.10e-08!24;UBERON:0004291!1.10e-08!24;UBERON:0000119!1.86e-08!312;UBERON:0000468!9.32e-08!659;UBERON:0000483!1.06e-07!309;UBERON:0000486!1.46e-07!82;UBERON:0000490!2.55e-07!138;UBERON:0005256!5.72e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.58e-15;42!UBERON:0003509;6.58e-15;42!UBERON:0004572;6.58e-15;42!UBERON:0004573;5.71e-14;33!UBERON:0004571;5.71e-14;33!UBERON:0000947;1.65e-08;21!UBERON:0010191;1.65e-08;21!UBERON:0000948;7.57e-08;22!UBERON:0007500;9.55e-08;56!UBERON:0001981;9.55e-08;56!UBERON:0004537;9.55e-08;56!UBERON:0007100;3.44e-07;25!UBERON:0000055;5.62e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.83e-20,83;UBERON:0001637,1.38e-18,42;UBERON:0003509,1.38e-18,42;UBERON:0004572,1.38e-18,42;UBERON:0002049,3.90e-16,78;UBERON:0007798,3.90e-16,78;UBERON:0007500,6.57e-16,59;UBERON:0001981,6.57e-16,59;UBERON:0004537,6.57e-16,59;UBERON:0006965,6.57e-16,59;UBERON:0000055,1.02e-15,68;UBERON:0004573,2.17e-15,33;UBERON:0004571,2.17e-15,33;UBERON:0004535,3.20e-14,109;UBERON:0001009,5.83e-14,112;UBERON:0003914,4.04e-12,117;UBERON:0001134,3.18e-09,62;UBERON:0002036,3.18e-09,62;UBERON:0003082,3.18e-09,62;UBERON:0000948,7.08e-09,24;UBERON:0005498,7.08e-09,24;UBERON:0004140,7.08e-09,24;UBERON:0009881,7.08e-09,24;UBERON:0004141,7.08e-09,24;UBERON:0003084,7.08e-09,24;UBERON:0007005,7.08e-09,24;UBERON:0004139,7.08e-09,24;UBERON:0004291,7.08e-09,24;UBERON:0002385,1.34e-08,64;UBERON:0001015,1.34e-08,64;UBERON:0000383,1.34e-08,64;UBERON:0000947,2.45e-08,21;UBERON:0010191,2.45e-08,21;UBERON:0007524,3.41e-08,73;UBERON:0007100,3.90e-08,27;UBERON:0002329,5.65e-08,71;UBERON:0003059,5.65e-08,71;UBERON:0007282,5.65e-08,71;UBERON:0004290,5.65e-08,71;UBERON:0009618,5.65e-08,71;UBERON:0007503,5.86e-08,78;UBERON:0003077,1.03e-07,72;UBERON:0007285,1.03e-07,72 | |||
|phase1_expression=1.81678379270557,7.06531728840244,1.83240725324762,6.00439790118782,3.5756887554183,6.10636966870258,7.59899634504932,1.89515962028049,0.522371256399677,0,0,0,0,2.22779435328084,1.98838425436749,4.03395087871065,6.62963980826375,8.76372108464848,2.43966399395253,0.369363174230364,2.85600967741954,1.56727360739044,0,0.273748850145768,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,8.31310050484502,19.0508406041638,19.1197405028287,25.4491503056352,45.2570429381451,0,0.443458794925128,0.43917392846563,1.44076983047484,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,2.08284300964557,1.13061588384802,3.35599548967925,2.75118041940067,2.08994966536811,0.516833518338658,0,4.01664735317604,0,0,3.90499292077071,0.367663080345869,12.1521292182264,1.07159673940896,0.898117490504679,0.675668882899933,0,0.949265659568129,0.732806975721629,0,0,0,8.44852317882041,16.3353360047308,1.32409180813219,37.001924076597,7.80270440836386,4.48542080113846,18.1473292740498,10.3600370335207,1.24484414159907,5.92726957106628,2.45192854670188,15.7411724750729,16.70910180992,0.234321431833797,0,0,0.448346041655403,0,0,0.140450806702248,0,0,0.103325781175765,1.18800285728205,7.17074094907815,0.910161361938026,0,0.168336113954066,0.750711119231785,0,1.75591048352335,3.37136575378922,2.70428506031874,2.26864366320042,6.63741652048789,2.98980344345994,7.62954844174423,7.50227740211006,6.80146692973697,4.3798891807757,4.46680455195816,9.62025093775217,10.0360115316035,5.80597680761463,3.68199594569197,10.0220555227663,6.74518225781567,3.52632343796741,3.22165125389926,0,0,0,0.121973706129595,0,0,0.518305275076852,0,0,0,13.5080597020506,1.38134921352481,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,2.94017422771084,0,0,6.49868897349544,0,0.245976877086227,0.514703430895577,0,0,0,0,0,0,0,0,0.939269553886573,2.45422961193825,5.55582615091933,9.13219930726072,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.205654985406647,0,0.285826432630578,5.04589879554123,5.66748089483264,7.6271817253788,3.61960804121778,7.15312891703765,4.22651376278,1.59562869950922,0,0.257207374262142,0,1.0656887160644,0.714889968290738,3.25572963234866,0,1.30294473717494,0.355391948742546,0.791951872933429,0,0,0,0,0,0,11.7416179190875,18.3779097334582,0,0,1.43833425785268,0,0,0,0,0,0.508189248444927,1.30139853857622,1.54657762555539,0.167516265334349,0,0,0,0,4.78496817704646,7.00238729483548,2.17012018959788,15.8057854763413,28.9054961851402,9.30444248700215,12.0655657442495,14.4454127869305,25.0148254461583,17.5904221197258,9.29915837949611,2.76553752812555,1.04260337361699,31.1323840365758,22.9906093953273,0,0,0,0,1.66435439510497,0.604780586659361,7.44323423456331,5.67809301165831,15.9976253826852,4.48487022394953,9.72243773226737,19.1416166160893,1.48418066444991,6.32259744590888,10.1210183428482,0.9033987161519,2.59627214591811,1.51073491997947,0.725156697549733,0,0.276242966807689,0,3.27764102412091,1.04899531967539,0,0,0,0,0,1.13733384070897,0,0.431831832204279,50.8949933877955,0.541892875087706,1.50506932156456,0,0,0,0,0,0,0.328014645699706,0,3.40035338437484,0.0915694648183434,0,0.574265537996172,1.95018073810956,1.6068392984416,4.64019447802185,1.84858340537573,2.30255512089194,1.65403886981437,2.14840489736547,3.48040065394148,1.44885266607372,11.3070685271356,0,0,0,0,6.04299214086472,19.5183655034997,0.6970372701606,4.00443654228915,7.45228442443831,0,9.266210955196,1.00187420719394,3.34942532423701,2.53103539774981,0.762520775695299,0.511795582622668,0.42793898803392,2.22742273548156,8.63443504219153,0.179872457583315,0,0,3.43710218674637,11.0957224821106,1.26377536871694,0,4.38684281336312,4.22600587027022,0.545999645631943,0.141405431953713,3.39024349860728,3.30819206127675,13.2687795048244,7.45366504931397,1.15755106853338,0.655894752046633,0.811641507850816,3.0982349809975,8.73256367849948,0.286822704408103,0.491245205065606,1.07001315444375,0.709522128141196,7.17765960012058,8.56166721695745,0,1.39973888097993,0,0.670302275535787,0,3.29503302718727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0.71623345421307,0,0,1.9882952955326,0.281338832821026,0,0,0.63337622438398,31.0826861671669,0.552567831062295,0,0,0,5.90975216557434,0,0,0,1.28236427328014,0,0,1.93866549219044,0.649376687132959,1.99613798001194,0,0,2.17499872630438,0,0,0,0,0,0,0,0.361789315876224,1.52581736317083,0.221158519862449,0,0.658156191461918,0,0,4.46311499322023,0,0,0,0.108647371922008,0.638002319463839,3.57230614267263,4.79731298416771,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.741412462787447,3.21031058919516,0.234264445725339,0,0,0,0.789168805698781,3.62972148145992,0.30607276163049,6.12909822396333,0,0,0,0,0,0,0.284609546029793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|short_description=p5@BGN | |||
}} |
Latest revision as of 00:08, 20 September 2015
Short description: | p5@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 205bp_to_U11686_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | P21810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.16e-16 | 76 |
vascular associated smooth muscle cell | 1.40e-12 | 32 |
muscle cell | 1.49e-09 | 55 |
muscle precursor cell | 3.99e-09 | 58 |
myoblast | 3.99e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.99e-09 | 58 |
extracellular matrix secreting cell | 2.31e-08 | 15 |
multi fate stem cell | 3.20e-08 | 427 |
electrically responsive cell | 3.40e-08 | 61 |
electrically active cell | 3.40e-08 | 61 |
preadipocyte | 5.59e-08 | 12 |
smooth muscle cell | 7.49e-08 | 43 |
smooth muscle myoblast | 7.49e-08 | 43 |
somatic stem cell | 1.27e-07 | 433 |
stromal cell | 2.19e-07 | 28 |
mesodermal cell | 5.53e-07 | 121 |
stem cell | 7.14e-07 | 441 |