FFCP PHASE1:Hg19::chrX:140271215..140271238,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23641 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6548 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENST00000460721_5end | |||
|cluster_id=chrX:140271215..140271238,- | |||
|description=CAGE_peak_5_at_LDOC1_5end | |||
|id=chrX:140271215..140271238,- | |||
|ontology_enrichment_celltype=CL:0000222!2.12e-20!119;CL:0000183!3.20e-16!59;CL:0000192!1.43e-15!42;CL:0000514!1.43e-15!42;CL:0000359!4.29e-15!32;CL:0000680!1.07e-14!57;CL:0000056!1.07e-14!57;CL:0000355!1.07e-14!57;CL:0000187!3.34e-14!54;CL:0000055!4.84e-14!180;CL:0000393!2.06e-12!60;CL:0000211!2.06e-12!60;CL:0000220!1.10e-09!246;CL:0002321!3.59e-09!248;CL:0000213!3.09e-07!57;CL:0000215!3.09e-07!57;CL:0002539!3.65e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.94e-15;32!CL:0000192;6.85e-11;43!CL:0002539;7.04e-08;10!CL:1000449;4.97e-07;15!CL:0000187;5.68e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.50e-19,121;CL:0000359,2.12e-15,32;CL:0000192,1.51e-14,43;CL:0000514,1.51e-14,43;CL:0000680,1.80e-13,58;CL:0000056,1.80e-13,58;CL:0000355,1.80e-13,58;CL:0000187,6.52e-13,55;CL:0000393,1.30e-10,61;CL:0000211,1.30e-10,61;CL:0002321,1.86e-08,250;CL:0002539,9.78e-08,10;CL:1000449,3.69e-07,15;CL:0000213,9.18e-07,58;CL:0000215,9.18e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;6.85e-11;43!CL:0000355;2.43e-07;58!CL:0000222;9.83e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!1.32e-32!286;UBERON:0000119!5.40e-30!312;UBERON:0000483!1.27e-29!309;UBERON:0004111!5.35e-27!241;UBERON:0000475!1.19e-24!365;UBERON:0000025!2.03e-23!194;UBERON:0002049!2.46e-23!79;UBERON:0007798!2.46e-23!79;UBERON:0001981!8.92e-22!60;UBERON:0007500!8.92e-22!60;UBERON:0004537!8.92e-22!60;UBERON:0006965!8.92e-22!60;UBERON:0000481!1.90e-21!347;UBERON:0000055!2.21e-21!69;UBERON:0001637!1.44e-20!42;UBERON:0003509!1.44e-20!42;UBERON:0004572!1.44e-20!42;UBERON:0004872!1.36e-19!84;UBERON:0003914!4.64e-17!118;UBERON:0004573!1.42e-16!33;UBERON:0004571!1.42e-16!33;UBERON:0000468!3.12e-15!659;UBERON:0004535!1.13e-14!110;UBERON:0000914!1.25e-14!83;UBERON:0002329!1.25e-14!83;UBERON:0003077!1.25e-14!83;UBERON:0003059!1.25e-14!83;UBERON:0007282!1.25e-14!83;UBERON:0009618!1.25e-14!83;UBERON:0007285!1.25e-14!83;UBERON:0004290!2.93e-14!70;UBERON:0000467!3.28e-14!625;UBERON:0000480!3.59e-14!626;UBERON:0002050!6.25e-14!605;UBERON:0005423!6.25e-14!605;UBERON:0005256!6.42e-14!143;UBERON:0000486!6.43e-14!82;UBERON:0000923!8.11e-14!604;UBERON:0005291!8.11e-14!604;UBERON:0006598!8.11e-14!604;UBERON:0002532!8.11e-14!604;UBERON:0001009!1.21e-13!113;UBERON:0000922!5.05e-13!612;UBERON:0001134!6.93e-13!61;UBERON:0002036!6.93e-13!61;UBERON:0003082!6.93e-13!61;UBERON:0002100!9.70e-13!216;UBERON:0002385!1.62e-12!63;UBERON:0001015!1.62e-12!63;UBERON:0000383!1.62e-12!63;UBERON:0000490!1.35e-11!138;UBERON:0000947!6.52e-11!21;UBERON:0010191!6.52e-11!21;UBERON:0003104!1.46e-10!238;UBERON:0009142!1.46e-10!238;UBERON:0000033!1.25e-09!123;UBERON:0004121!1.84e-09!169;UBERON:0000153!3.83e-09!129;UBERON:0007811!3.83e-09!129;UBERON:0000064!8.30e-09!219;UBERON:0003075!1.05e-08!86;UBERON:0007284!1.05e-08!86;UBERON:0000924!1.68e-08!173;UBERON:0006601!1.68e-08!173;UBERON:0000955!1.09e-07!69;UBERON:0006238!1.09e-07!69;UBERON:0002616!1.20e-07!59;UBERON:0002346!2.04e-07!90;UBERON:0005743!2.13e-07!86;UBERON:0001049!2.58e-07!57;UBERON:0005068!2.58e-07!57;UBERON:0006241!2.58e-07!57;UBERON:0007135!2.58e-07!57;UBERON:0001017!2.62e-07!82;UBERON:0004237!3.65e-07!10;UBERON:0004695!3.65e-07!10;UBERON:0002111!3.65e-07!10;UBERON:0004178!3.65e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.87e-16;33!UBERON:0004571;3.87e-16;33!UBERON:0001637;5.91e-16;42!UBERON:0003509;5.91e-16;42!UBERON:0004572;5.91e-16;42!UBERON:0007500;3.59e-14;56!UBERON:0001981;3.59e-14;56!UBERON:0004537;3.59e-14;56!UBERON:0003914;5.42e-13;74!UBERON:0000947;1.54e-11;21!UBERON:0010191;1.54e-11;21!UBERON:0000055;1.57e-10;65!UBERON:0002049;1.80e-09;75!UBERON:0007798;1.80e-09;75!UBERON:0000025;7.88e-09;93!UBERON:0004237;7.04e-08;10!UBERON:0004695;7.04e-08;10!UBERON:0002111;7.04e-08;10!UBERON:0004178;7.04e-08;10!UBERON:0006555;4.97e-07;15!UBERON:0004819;4.97e-07;15!UBERON:0001285;4.97e-07;15!UBERON:0007684;4.97e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,4.37e-29,309;UBERON:0000483,7.17e-29,306;UBERON:0004111,5.43e-27,240;UBERON:0000025,6.50e-25,192;UBERON:0007500,7.07e-25,59;UBERON:0001981,7.07e-25,59;UBERON:0004537,7.07e-25,59;UBERON:0006965,7.07e-25,59;UBERON:0002049,4.53e-24,78;UBERON:0007798,4.53e-24,78;UBERON:0000055,1.83e-22,68;UBERON:0001637,5.59e-22,42;UBERON:0003509,5.59e-22,42;UBERON:0004572,5.59e-22,42;UBERON:0004872,9.76e-22,83;UBERON:0003914,1.29e-19,117;UBERON:0004573,1.41e-17,33;UBERON:0004571,1.41e-17,33;UBERON:0007503,1.04e-15,78;UBERON:0004535,1.48e-15,109;UBERON:0001009,2.78e-14,112;UBERON:0005423,4.77e-13,581;UBERON:0003077,7.65e-13,72;UBERON:0007285,7.65e-13,72;UBERON:0000490,8.83e-13,148;UBERON:0007524,1.05e-12,73;UBERON:0002329,1.19e-12,71;UBERON:0003059,1.19e-12,71;UBERON:0007282,1.19e-12,71;UBERON:0004290,1.19e-12,71;UBERON:0009618,1.19e-12,71;UBERON:0000922,4.52e-12,592;UBERON:0001134,6.36e-12,62;UBERON:0002036,6.36e-12,62;UBERON:0003082,6.36e-12,62;UBERON:0000486,6.55e-12,83;UBERON:0002050,8.77e-12,564;UBERON:0002385,1.73e-11,64;UBERON:0001015,1.73e-11,64;UBERON:0000383,1.73e-11,64;UBERON:0003104,1.74e-11,160;UBERON:0009142,1.74e-11,160;UBERON:0000947,2.38e-11,21;UBERON:0010191,2.38e-11,21;UBERON:0000923,2.62e-11,560;UBERON:0010316,2.62e-11,560;UBERON:0005291,2.62e-11,560;UBERON:0006598,2.62e-11,560;UBERON:0010317,2.62e-11,560;UBERON:0002532,2.62e-11,560;UBERON:0005256,2.14e-10,122;UBERON:0002100,4.07e-10,199;UBERON:0010314,4.51e-10,132;UBERON:0010371,1.70e-09,104;UBERON:0003075,6.67e-08,82;UBERON:0007284,6.67e-08,82;UBERON:0004237,9.78e-08,10;UBERON:0004695,9.78e-08,10;UBERON:0002111,9.78e-08,10;UBERON:0004178,9.78e-08,10;UBERON:0006555,3.13e-07,16;UBERON:0004819,3.13e-07,16;UBERON:0001048,3.31e-07,160;UBERON:0004211,3.69e-07,15;UBERON:0009773,3.69e-07,15;UBERON:0001231,3.69e-07,15;UBERON:0001285,3.69e-07,15;UBERON:0007684,3.69e-07,15;UBERON:0004208,3.69e-07,15 | |||
|phase1_expression=0.181678379270557,0.856402095563933,1.40954404095971,3.00219895059391,3.5756887554183,1.74467704820074,2.53299878168311,0.631719873426831,1.04474251279935,2.21160542851358,4.88460817580699,2.83973783769224,5.27533956456907,5.69325223616215,10.9361133990212,6.05092631806598,9.04041792035965,8.03341099426111,8.29485757943862,6.40229501999297,12.4440421658994,4.07491137921514,1.43117993565528,0.821246550437305,0.627713197974014,0,0,0,0,0,0,0,1.8072355126695,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,1.64481199199607,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0,0.384273959177026,0.130059347559878,0,0.552700035571697,0.289803085735052,0,0.267540828089713,0,0.226618685395132,0.766440987203842,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0,0,0.403213486449465,0,0.289648807765598,0,3.35350429851818,5.37022759742827,0.361439152384566,5.0133791063589,1.88300474649071,0.795285947051099,1.45990461090791,2.07976597760949,3.32594096193846,4.21606971327005,1.57174890597255,4.00724817121796,1.48313777113772,0,0,0,0,0.571994910780128,0,4.57153536943422,3.4409383804245,6.59566953054429,5.08777147731609,2.93649605346934,4.95212475492121,4.38889429727302,0.258416759169329,3.5576626268671,0.66944122552934,7.65375702507379,3.80136052859256,15.1318475679865,0.735326160691737,3.24056779152704,2.50039239195423,2.46982309888787,3.49095589498299,0,3.79706263827252,2.93122790288652,0,0,3.92484646928281,0.496971951695318,7.47120018821021,5.29636723252875,3.44203944898576,6.38403087957043,5.04609840128076,1.06748995729705,3.20667812942308,2.48968828319813,0.67355336034844,2.45192854670188,2.4217188423189,2.30470369792,0.234321431833797,3.74592092196385,2.85235910772225,3.58676833324323,0.704606991862589,0.971237666208789,0.280901613404497,2.65400422631361,1.47401180774122,1.54988671763648,1.18800285728205,2.22540236350701,16.3829045148845,12.2165084108761,0.673344455816265,0.750711119231785,0.831192346452549,2.19488810440419,1.5324389789951,0.600952235626387,2.49550802952046,0.717558542755448,1.2813443329114,2.54318281391474,0,1.64884046781502,1.8034837803194,2.79175284497385,0,0.292311015483596,0.252433774244115,1.10459878370759,4.0411514204703,2.4850671476163,2.82105875037393,1.3564847384839,2.12586938479627,2.18196896472668,3.44165514466805,0,0,0,0,0,1.82488679537915,9.38697193978896,4.5026865673502,6.90674606762403,2.78620756819187,7.21879481669586,2.72105640091641,2.19160097101532,2.41011029883482,3.41911315470421,3.92182999366331,3.32178866755535,2.29213223872279,3.13954344200554,3.07797725557112,10.3341763647451,5.60967095213783,6.9967581926338,5.88034845542168,0,0,0,0,0,6.00487336044839,1.64625428112938,3.37205259772859,0.603173834469785,1.20364978706088,0.651616610620649,1.03993478527958,0,1.97081688457631,8.45342598497916,2.30986316417718,0.925971025153221,0.761016608938393,22.1257231428597,24.8960987007513,0,0,0,3.74935335947108,1.51183915378974,1.27597587518148,1.97028749946266,2.61570544662566,5.75074018747817,0,0.352193736052904,0,0.144119953416961,0.25248486685276,0,0,0,0,0.205654985406647,0,0.571652865261156,4.37311228946907,0.43596006883328,1.98013371716565,5.04159691455333,0,3.381211010224,4.5209479819428,5.2003718455683,1.54324424557285,1.41849132023278,1.5985330740966,0.57191197463259,7.05408087008876,3.29296134712308,0.977208552881205,0.355391948742546,0.791951872933429,1.50719688529793,1.74306691720059,1.99945982364114,0,0,0,0.718874566474748,0,1.42636905040718,3.04040744001916,2.87666851570537,2.14873155887875,0,0.591092280605782,0.215627574859517,0.256686072559497,1.52456774533478,3.90419561572865,0.773288812777695,1.50764638800914,1.27587750330633,0,0,0,3.55805325985506,5.50187573165645,3.7977103317963,0.623912584592421,0.356857977594324,1.89242898040722,1.28855556491985,1.80567659836631,4.5481500811197,3.10419213877515,1.32845119707087,2.02806085395873,4.51794795234031,3.72022199179207,2.74514739048685,0,0.431428401637234,0.213455115606889,1.81876542867756,4.99306318531491,5.74541557326393,1.24053903909388,0.306923946576125,1.12264037773229,2.43464383585832,1.53512174720011,2.0911009748669,1.48418066444991,4.78050050788232,4.97172830876756,3.12083192852475,8.30807086693794,5.11325665223821,0,6.01519410909855,1.19705285616665,2.64073230778596,2.91345868810747,3.54035920390445,4.96319574198153,3.31165949548983,8.62784746094541,7.30696123266303,3.0609972378934,13.6480060885076,7.48412303216669,2.15915916102139,6.16909010761157,7.04460737614017,6.02027728625824,1.78413391131527,1.66215201785745,2.91037181138832,0,0,0.512900250232778,2.62411716559765,1.62689197332152,0.206082023295445,3.66277859273374,2.88783249722058,3.44559322797703,1.95018073810956,1.6068392984416,1.16004861950546,1.54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| |||
|short_description=p5@LDOC1 | |||
}} |
Latest revision as of 19:33, 19 September 2015
Short description: | p5@LDOC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LDOC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000460721_5end |
EntrezGene: | LDOC1 |
HGNC: | 6548 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.50e-19 | 121 |
vascular associated smooth muscle cell | 2.12e-15 | 32 |
smooth muscle cell | 1.51e-14 | 43 |
smooth muscle myoblast | 1.51e-14 | 43 |
muscle precursor cell | 1.80e-13 | 58 |
myoblast | 1.80e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.80e-13 | 58 |
muscle cell | 6.52e-13 | 55 |
electrically responsive cell | 1.30e-10 | 61 |
electrically active cell | 1.30e-10 | 61 |
embryonic cell | 1.86e-08 | 250 |
aortic smooth muscle cell | 9.78e-08 | 10 |
epithelial cell of nephron | 3.69e-07 | 15 |
lining cell | 9.18e-07 | 58 |
barrier cell | 9.18e-07 | 58 |