FFCP PHASE1:Mm9::chr6:83106347..83106381,-: Difference between revisions
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{{FFCP|EntrezGene=75659|HGNC=|MCL_coexpression_id=60|UniProt=Q9R0D8|association_with_transcript=0bp_to_ENSMUST00000146969,ENSMUST00000154625,NM_023790,uc009cmv.2,uc009cmw.2_5end|description=CAGE_peak_1_at_Wdr54_5end|id=chr6:83106347..83106381,-|ontology_enrichment_celltype=CL:0002319!3.65e-17!43;CL:0000221!5.33e-17!44;CL:0000133!5.33e-17!44;CL:0000055!2.40e-16!50;CL:0000540!1.28e-12!33;CL:0000047!1.28e-12!33;CL:0000031!1.28e-12!33;CL:0000404!1.28e-12!33;CL:0000393!1.60e-12!39;CL:0000211!1.60e-12!39;CL:0000117!5.99e-12!23;CL:0000337!5.99e-12!23;CL:0002321!3.75e-07!70;CL:0000220!3.75e-07!70|ontology_enrichment_celltype_v019_2=CL:0002319,1.46e-17,43;CL:0000221,2.15e-17,44;CL:0000133,2.15e-17,44;CL:0000540,6.71e-13,33;CL:0000047,6.71e-13,33;CL:0000031,6.71e-13,33;CL:0000404,6.71e-13,33;CL:0000393,8.42e-13,39;CL:0000211,8.42e-13,39;CL:0000117,3.25e-12,23;CL:0000337,3.25e-12,23;CL:0002321,1.09e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.66e-34!75;UBERON:0001016!4.66e-34!75;UBERON:0001017!1.95e-33!73;UBERON:0005743!1.95e-33!73;UBERON:0004121!7.64e-30!102;UBERON:0000924!7.64e-30!102;UBERON:0006601!7.64e-30!102;UBERON:0002346!5.55e-27!71;UBERON:0003075!5.55e-27!71;UBERON:0007284!5.55e-27!71;UBERON:0000033!6.53e-26!63;UBERON:0001049!1.92e-25!52;UBERON:0005068!1.92e-25!52;UBERON:0006241!1.92e-25!52;UBERON:0007135!1.92e-25!52;UBERON:0000955!5.27e-25!50;UBERON:0006238!5.27e-25!50;UBERON:0002616!1.65e-24!49;UBERON:0003056!1.70e-21!49;UBERON:0003080!2.86e-19!40;UBERON:0002780!1.14e-18!39;UBERON:0001890!1.14e-18!39;UBERON:0006240!1.14e-18!39;UBERON:0002020!9.11e-18!34;UBERON:0002791!1.28e-15!29;UBERON:0003528!1.28e-15!29;UBERON:0001893!1.28e-15!29;UBERON:0000153!1.76e-11!94;UBERON:0000025!1.96e-11!114;UBERON:0000956!2.52e-11!21;UBERON:0001869!2.52e-11!21;UBERON:0000203!2.52e-11!21;UBERON:0004111!3.56e-11!122;UBERON:0007811!1.78e-10!86;UBERON:0002619!1.13e-09!17;UBERON:0003076!9.89e-07!12;UBERON:0003057!9.89e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.82e-35,75;UBERON:0001017,2.96e-34,73;UBERON:0004121,9.12e-31,95;UBERON:0000924,9.12e-31,95;UBERON:0006601,9.12e-31,95;UBERON:0002346,3.06e-29,64;UBERON:0003075,3.06e-29,64;UBERON:0007284,3.06e-29,64;UBERON:0000073,1.45e-27,54;UBERON:0001049,4.69e-26,52;UBERON:0005068,4.69e-26,52;UBERON:0006241,4.69e-26,52;UBERON:0007135,4.69e-26,52;UBERON:0010314,1.22e-25,92;UBERON:0010371,1.94e-24,73;UBERON:0000955,1.54e-23,47;UBERON:0006238,1.54e-23,47;UBERON:0002616,4.86e-23,46;UBERON:0003056,5.23e-22,49;UBERON:0003080,1.01e-19,40;UBERON:0002780,4.17e-19,39;UBERON:0001890,4.17e-19,39;UBERON:0006240,4.17e-19,39;UBERON:0002020,3.51e-18,34;UBERON:0003528,5.58e-16,29;UBERON:0002791,5.58e-16,29;UBERON:0001893,5.58e-16,29;UBERON:0000956,1.42e-11,21;UBERON:0001869,1.42e-11,21;UBERON:0000203,1.42e-11,21;UBERON:0000025,1.87e-10,114;UBERON:0004111,2.50e-10,122;UBERON:0002619,7.01e-10,17;UBERON:0003076,7.28e-07,12;UBERON:0003057,7.28e-07,12|phase1_expression=4.48416771893423,0,0,0.30246421130683,0,0.503637815735669,0,0.387369970324729,0,0,0,0.0797721589953364,0,0.174840804837995,0,0,0,0.157731082679119,0.137114433605739,0,14.9676190665883,1.88652807281682,0.522399578277871,0.319984845586813,0.91763712426868,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.443461021310609,0.635030673459631,9.22597181376855,15.8481681015439,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,2.26614272356039,3.4468156614635,1.83546752161682,6.25913075478431,8.50298109883741,10.7646229539891,8.1660557611199,7.41928034614421,17.2503077237966,0,0,0.336093799142464,4.11615097657515,2.57880095944881,4.12537673821954,5.46254444320914,11.6378015439847,8.23980824558033,3.38844532069132,3.55717918444456,2.6996991518442,2.96659908770092,2.1314403448383,9.28760342607055,23.4373166246148,6.42875596312561,6.21027316325777,7.57169860864975,7.9982275633065,8.39300455616131,7.59442955132715,8.53024692062304,11.0306254393203,18.7196997698961,11.2364857514965,13.3637683932932,8.30883612700221,9.69769022185542,7.8137005583514,13.4007839520663,24.1987922313622,16.0438160165651,6.48182888042069,6.83384067835694,8.76077395378913,3.93776205332557,6.04572480854284,0.869593466105033,0.860423876981386,4.0798280022465,2.15881276655127,1.29955283489534,0.448026887097336,3.37066608316204,5.11290967734173,5.97507810586598,7.77347063922748,2.39433813620357,6.41632387071589,0,0,1.73192832808971,1.26679932737549,0.505524445014783,2.51204535381932,1.03575153458869,2.22663208597237,2.4287945747259,2.74018930480927,3.22861696158482,1.80867168663147,0.823120949949934,2.63899841792318,0.741584903203122,1.01219549843938,0,0.970601099684455,0.883366073841574,0.969750506270444,3.72783522436244,9.36898550436951,14.0329293565015,0,0,0.599902730993408,0.254140454146129,11.9832511523858,12.8100168789215,7.03664371832041,17.2086076990354,14.5757810678288,13.5062228963714,13.4660248346239,1.83310854930569,1.11966273549084,2.77995034277042,2.94618598241064,6.63614259109789,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75659 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q9R0D8 | |||
|association_with_transcript=0bp_to_ENSMUST00000146969,ENSMUST00000154625,NM_023790,uc009cmv.2,uc009cmw.2_5end | |||
|cluster_id=chr6:83106347..83106381,- | |||
|description=CAGE_peak_1_at_Wdr54_5end | |||
|id=chr6:83106347..83106381,- | |||
|ontology_enrichment_celltype=CL:0002319!3.65e-17!43;CL:0000221!5.33e-17!44;CL:0000133!5.33e-17!44;CL:0000055!2.40e-16!50;CL:0000540!1.28e-12!33;CL:0000047!1.28e-12!33;CL:0000031!1.28e-12!33;CL:0000404!1.28e-12!33;CL:0000393!1.60e-12!39;CL:0000211!1.60e-12!39;CL:0000117!5.99e-12!23;CL:0000337!5.99e-12!23;CL:0002321!3.75e-07!70;CL:0000220!3.75e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.46e-17,43;CL:0000221,2.15e-17,44;CL:0000133,2.15e-17,44;CL:0000540,6.71e-13,33;CL:0000047,6.71e-13,33;CL:0000031,6.71e-13,33;CL:0000404,6.71e-13,33;CL:0000393,8.42e-13,39;CL:0000211,8.42e-13,39;CL:0000117,3.25e-12,23;CL:0000337,3.25e-12,23;CL:0002321,1.09e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.66e-34!75;UBERON:0001016!4.66e-34!75;UBERON:0001017!1.95e-33!73;UBERON:0005743!1.95e-33!73;UBERON:0004121!7.64e-30!102;UBERON:0000924!7.64e-30!102;UBERON:0006601!7.64e-30!102;UBERON:0002346!5.55e-27!71;UBERON:0003075!5.55e-27!71;UBERON:0007284!5.55e-27!71;UBERON:0000033!6.53e-26!63;UBERON:0001049!1.92e-25!52;UBERON:0005068!1.92e-25!52;UBERON:0006241!1.92e-25!52;UBERON:0007135!1.92e-25!52;UBERON:0000955!5.27e-25!50;UBERON:0006238!5.27e-25!50;UBERON:0002616!1.65e-24!49;UBERON:0003056!1.70e-21!49;UBERON:0003080!2.86e-19!40;UBERON:0002780!1.14e-18!39;UBERON:0001890!1.14e-18!39;UBERON:0006240!1.14e-18!39;UBERON:0002020!9.11e-18!34;UBERON:0002791!1.28e-15!29;UBERON:0003528!1.28e-15!29;UBERON:0001893!1.28e-15!29;UBERON:0000153!1.76e-11!94;UBERON:0000025!1.96e-11!114;UBERON:0000956!2.52e-11!21;UBERON:0001869!2.52e-11!21;UBERON:0000203!2.52e-11!21;UBERON:0004111!3.56e-11!122;UBERON:0007811!1.78e-10!86;UBERON:0002619!1.13e-09!17;UBERON:0003076!9.89e-07!12;UBERON:0003057!9.89e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.82e-35,75;UBERON:0001017,2.96e-34,73;UBERON:0004121,9.12e-31,95;UBERON:0000924,9.12e-31,95;UBERON:0006601,9.12e-31,95;UBERON:0002346,3.06e-29,64;UBERON:0003075,3.06e-29,64;UBERON:0007284,3.06e-29,64;UBERON:0000073,1.45e-27,54;UBERON:0001049,4.69e-26,52;UBERON:0005068,4.69e-26,52;UBERON:0006241,4.69e-26,52;UBERON:0007135,4.69e-26,52;UBERON:0010314,1.22e-25,92;UBERON:0010371,1.94e-24,73;UBERON:0000955,1.54e-23,47;UBERON:0006238,1.54e-23,47;UBERON:0002616,4.86e-23,46;UBERON:0003056,5.23e-22,49;UBERON:0003080,1.01e-19,40;UBERON:0002780,4.17e-19,39;UBERON:0001890,4.17e-19,39;UBERON:0006240,4.17e-19,39;UBERON:0002020,3.51e-18,34;UBERON:0003528,5.58e-16,29;UBERON:0002791,5.58e-16,29;UBERON:0001893,5.58e-16,29;UBERON:0000956,1.42e-11,21;UBERON:0001869,1.42e-11,21;UBERON:0000203,1.42e-11,21;UBERON:0000025,1.87e-10,114;UBERON:0004111,2.50e-10,122;UBERON:0002619,7.01e-10,17;UBERON:0003076,7.28e-07,12;UBERON:0003057,7.28e-07,12 | |||
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| |||
|short_description=p1@Wdr54 | |||
}} |
Latest revision as of 19:00, 1 October 2015
Short description: | p1@Wdr54 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Wdr54_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000146969, ENSMUST00000154625, NM_023790, uc009cmv.2, uc009cmw.2_5end |
EntrezGene: | Wdr54 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.46e-17 | 43 |
ectodermal cell | 2.15e-17 | 44 |
neurectodermal cell | 2.15e-17 | 44 |
neuron | 6.71e-13 | 33 |
neuronal stem cell | 6.71e-13 | 33 |
neuroblast | 6.71e-13 | 33 |
electrically signaling cell | 6.71e-13 | 33 |
electrically responsive cell | 8.42e-13 | 39 |
electrically active cell | 8.42e-13 | 39 |
CNS neuron (sensu Vertebrata) | 3.25e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.25e-12 | 23 |
embryonic cell | 1.09e-07 | 70 |