FFCP PHASE1:Hg19::chrX:107069063..107069123,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11043 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7096 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UJV3 | |||
|association_with_transcript=0bp_to_ENST00000262843,NM_012216,NM_052817,uc004enk.2,uc004enl.2_5end | |||
|cluster_id=chrX:107069063..107069123,+ | |||
|description=CAGE_peak_1_at_MID2_5end | |||
|id=chrX:107069063..107069123,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.20e-11!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.49e-10,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!7.37e-15!286;UBERON:0004111!2.78e-13!241;UBERON:0007023!6.43e-12!115;UBERON:0000481!1.12e-11!347;UBERON:0000475!1.56e-11!365;UBERON:0004119!3.26e-10!169;UBERON:0000925!3.26e-10!169;UBERON:0006595!3.26e-10!169;UBERON:0000468!1.90e-09!659;UBERON:0001007!1.44e-08!155;UBERON:0001555!1.44e-08!155;UBERON:0007026!1.44e-08!155;UBERON:0000466!4.66e-08!126;UBERON:0000464!5.77e-08!104;UBERON:0009569!5.88e-08!113;UBERON:0001004!7.20e-08!72;UBERON:0000483!9.72e-08!309;UBERON:0000119!2.34e-07!312;UBERON:0004921!2.64e-07!129;UBERON:0004185!2.64e-07!129;UBERON:0002100!6.80e-07!216;UBERON:0000467!7.76e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.59e-11,240;UBERON:0007023,5.75e-11,114;UBERON:0004119,1.95e-09,160;UBERON:0000925,1.95e-09,160;UBERON:0006595,1.95e-09,160;UBERON:0009569,5.15e-08,112;UBERON:0001007,6.24e-08,145;UBERON:0001555,6.24e-08,145;UBERON:0007026,6.24e-08,145;UBERON:0004921,3.08e-07,118;UBERON:0001004,5.84e-07,74;UBERON:0001443,7.72e-07,11;UBERON:0001048,8.73e-07,160 | |||
|phase1_expression=3.81524596468169,5.1384125733836,2.11431606143957,3.00219895059391,3.12872766099101,1.74467704820074,0,2.52687949370732,0.522371256399677,1.22866968250754,2.79120467188971,2.40285509343189,1.31883489114227,0.618831764800233,1.32558950291166,2.6893005858071,3.61616716814386,0.730310090387373,2.92759679274304,1.10808952269109,1.22400414746552,0.940364164434263,1.43117993565528,1.77936752594749,0.753255837568817,0,0.0821005894499457,0,1.18009283054671,1.91914699048606,0.464448369948228,0.919421224478927,4.51808878167375,6.28581817283539,0,0,0.293600439334847,0.553995408531877,1.00272223735071,1.30206522429511,0,0.32389366601898,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,2.93618594685469,1.14681968437569,0,0,0,9.63877873557782,9.43225830597995,5.14003747498773,0.501559486172034,4.23698946623668,4.73447805734733,1.94826728407911,0.111410456885174,0.294605907474837,0.886135578334485,0.541607727530031,0.25618263945135,0,0.328875809207352,0,0.579606171470105,4.00373720537563,4.0131124213457,6.27213142829861,1.13309342697566,3.44898444241729,2.06176467289578,1.77113784413652,2.86708872891687,5.20866763085135,2.85135613334512,4.21610333417764,4.22355816809581,3.74792179657038,3.31488152861624,5.74789597844733,7.4594494993151,5.88368430723716,6.95157138637435,2.43806866313962,2.68280343881454,4.60305222636709,1.44575660953827,0,2.17269778441236,3.1811437882044,2.43317435151318,1.03988298880475,1.10864698731282,1.05401742831751,4.51877810467109,2.91436230634034,2.22470665670658,9.08732702233113,8.70648686496336,7.31268782853758,0,0,0,1.98762407366705,1.72046919021225,3.81854551768354,0.56530794192401,3.77549492588915,3.02629846134074,1.67195973229448,6.71883573840255,7.1153252537342,10.0416183829401,6.44526907374635,4.56163263431108,8.7862340717341,3.30896772311282,4.0507097394088,6.07238152331742,4.04152870727106,4.95490514126618,0,0.949265659568129,2.38162267109529,0,0,5.23312862571041,2.48485975847659,1.64619665163954,0.264818361626438,0.286836620748814,0.709336764396714,2.24271040056923,2.1349799145941,1.2333377420858,1.24484414159907,2.82892411346345,2.12500474047496,2.8757911252537,2.88087962239999,2.10889288650417,0.312160076830321,0.570471821544449,0.448346041655403,1.05691048779388,0.323745888736263,0.140450806702248,1.02077085627447,0.859840221182376,1.23990937410919,0,1.48360157567134,0.910161361938026,1.43723628363248,0.336672227908132,0.875829639103749,1.10825646193673,1.75591048352335,1.22595118319608,0.600952235626387,1.70148274740032,1.4351170855109,2.77624605464138,3.39091041855299,0.600182192168805,1.44273540933814,2.83404594050192,3.35010341396862,1.85653965465393,1.94874010322397,1.7670364197088,2.48534726334208,2.26304479546337,1.42003837006646,1.5112814734146,2.37384829234683,4.83152132908242,7.0913991353617,2.86804595389004,2.43947412259191,1.45782745153634,4.06678800043314,3.93912009058408,5.04641701751257,1.09493207722749,0,1.28648187638577,0,1.85747171212792,2.88751792667834,5.67872640191251,4.72037132218685,3.61516544825223,4.08087699109858,4.35758888184812,4.27087114399974,5.52808363456674,3.92442930250692,6.54070166808864,1.4763109092493,0,2.057870056657,1.47008711385542,0,6.87979051674338,5.90789906681404,0,1.10689594688802,2.05881372358231,2.85350742062426,2.24803506515239,3.61904300681871,4.16648003213383,0.977424915930974,1.03993478527958,2.88662684050547,2.43453850447661,1.6437217193015,8.37325397014228,6.94478268864916,7.22965778491473,16.5942923571448,8.58486162094873,0,0.702012795417713,0,3.74935335947108,3.69560682037491,4.11147782002921,6.35865511190223,9.30028603244678,3.06706143332169,0,0,0.621984346622316,0.432359860250884,1.00993946741104,0.063497894292169,0,0,0,0.411309970813294,0.901029173531752,0.285826432630578,0.784917590417525,0.43596006883328,0.36669142910475,1.42198887333556,0,3.381211010224,3.72313363218819,3.12022310734098,0.257207374262142,1.41849132023278,0.266422179016099,6.86294369559108,3.25572963234866,3.29296134712308,3.58309802723109,5.33087923113819,0.791951872933429,0.904318131178758,2.61460037580088,2.69927076191554,0,0,0,1.4377491329495,4.59447743336456,0,2.17171960001369,0.821905290201534,1.96967059563885,0,4.13764596424047,4.74380664690938,2.82354679815446,0.76228387266739,0,0,0.167516265334349,0,0,0,0.414415513436035,1.96306386750624,0.500170521059677,0.813795071099207,2.49565033836969,2.49800584316026,3.78485796081443,2.81139395982512,0.902838299183157,0,0,0,1.65932251687533,0.868836144680828,0,0.343143423810856,2.68798433959754,3.01999881146064,2.56146138728266,1.5156378572313,1.66435439510497,2.11673205330776,4.96215615637554,4.45039722535381,5.61320188866147,4.61300937320523,3.58195074346692,2.73451665944133,4.45254199334973,0.616838775210622,1.42049380250502,0.328508624055237,2.59627214591811,0.929683027679674,0.604297247958111,3.00759705454927,6.16942625870505,2.29628896329214,2.1850940160806,2.09799063935079,3.15839729035188,3.31165949548983,3.13739907670742,1.46139224653261,3.0609972378934,4.54933536283586,2.38131187387122,3.02282282542995,1.54227252690289,2.70946437543853,3.01013864312912,3.56826782263054,4.15538004464362,3.35812132083267,0,0,2.3080511260475,1.96808787419823,2.92840555197873,3.09123034943167,0,0,5.74265537996172,1.30012049207304,3.21367859688319,1.16004861950546,1.69453478826109,1.5350367472613,1.51620229732984,2.57808587683857,2.17525040871343,1.87498580315422,0.623224249527161,5.61968712227326,6.72665235777872,9.06050258711547,9.60998918127724,1.39453664789186,0,2.0911118104818,1.84820148105653,1.06461206063404,0.869932992075073,1.48259375283136,1.28812398067792,2.97726695487734,0.949138274156178,1.90630193923825,0.511795582622668,1.71175595213568,1.27281299170375,0.78494864019923,1.97859703341646,2.47083326762449,3.29874726567922,0.808729926293264,0,3.37006764991185,0.975267478179181,3.41198885483798,3.16950440270266,1.50149902548784,1.69686518344455,1.13008116620243,0,1.32687795048244,3.94605796728386,0.578775534266688,1.31178950409327,0.811641507850816,1.239293992399,0.563391205064483,2.58140433967293,2.35797698431491,1.07001315444375,2.48332744849418,1.47775344708365,0.658589785919804,1.13841952129715,1.04980416073495,2.30933070541229,5.3624182042863,2.17781969722645,3.29503302718727,3.87454835404107,5.05414427002877,3.10401107475673,6.20253180558791,1.01489521846434,0.764637207142375,2.84823593587081,1.42939065274673,2.05681136543097,1.29694662238543,0.540031437238115,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0,0,0,0,1.53620382154229,0.447352215784832,2.0021897005429,0,0,0,0,0,1.4098700508785,0,6.00683535014765,0.849523652246594,0,0.568272293612826,7.87856799634377,2.37571744666111,7.6790175524808,0.994147647766298,1.82870241333667,5.56543525114529,0,0.422250816255987,7.96991953004279,3.31540698637377,0,1.73856760253663,0,1.86623752597084,4.22381250392436,1.25314822272926,0,10.2589141862411,0,3.33410970433911,0.969332746095218,2.59750674853184,0,4.94812746061943,5.94727999974131,7.97499532978273,1.93448862085349,1.77977555204936,1.65471377237555,2.06846023944879,0,0,0.885741385813839,4.46206822914009,9.15490417902499,8.29344449484185,2.06883333267483,1.97446857438575,1.41620002574687,11.8510182636813,7.23332429935692,1.48124672601102,0,0,1.08647371922008,2.23300811812344,1.64875668123352,1.5991043280559,0,0,0,0,0,0,0,0,3.58696709697646,0.816164040795739,0.141353071433941,0.432777279484182,0.995261931078505,3.80367527364358,1.83309043480088,0.593042257361244,0.741383633679017,0.417687798021821,2.08943512240099,6.42062117839031,2.10838001152805,0,5.28294471116642,1.94224303627274,7.49710365413842,1.20990716048664,0.61214552326098,4.86536663139357,5.71228993775072,3.5253985075064,1.32930774541437,2.64793564700399,0,2.38944859545918,2.56148591426813,0,0.347119476670262,3.91969589657511,4.26590112243973,7.16379339792324,0,1.06431964417994,0.803982487948041,0.985385484638511,9.5049236158651,2.82419605412801,6.10148000107438,1.50746117111426,0.794858446811959,1.89932387867636,1.75996244461323,2.00397050628834,3.20179492109029,3.59657297247834,3.02589876023623,0,0,2.59298636378669,2.85780831800495,2.12124631155116,1.22313785466253,0.627617077873999,0.611989305817931,0.288950589901519,1.80126086612937,1.77976992559591,0,0.859530882839914,0,1.95497680890578,1.3749625440701,0.717873024576814,0.798716001995964,2.57535628881943,0.89268582976749,1.2764859772478,4.32359860250884,0,0,0,0,6.59464126148817,0,0,1.90684768556206,0.482259445395058,0.137539436597234,0,0,5.41661368190565,2.18698403968889,2.0126081255956,4.72834243795189,4.35373081520484,2.95680942254338,0.179287339332845,4.03021914370835,0,1.98627591109629,0.5085370753095,0,1.72844298240254,0.979762080328227,2.39460383124975,0.082092520749339,2.04465626142506,4.64579575232515,2.05173127149315,5.30027555648885,1.93924434542326,3.43804764530994,3.42173675768659,0,8.64978041798327,5.81655928868764,3.72815149812476,1.9846640872478,0.395223263795889,1.82688897571344,5.74507131993164,8.70428485391158,5.5151776684994,6.43325711203269,4.91808946064707,0.628216385000937,7.97461361970287,1.34228891392159,3.254964198369,1.72022758707021,3.88251680378983,3.29110935589332,0,3.12451019905266,0,0,16.468607378872,0,0.28984205722165,0.895528817321244,3.50569964770837,2.77402930751307,0.378806010550178,3.27038272278348,0,4.57680136793847,2.87338755150154,1.86524640699337,1.92211694986524,4.46030948058367,2.69881867298163,3.26052209440145,2.07353103920428,2.65841714557995,3.1304703708704,5.10875870590543,2.28483127301277,2.03435366602331,1.27294061441792,6.12240175142184,2.32016879939247,1.99047944349308,0,1.71697852591396,2.02049693259551,0,0,0.857766365499703,3.65392008751296,2.04035332961045,2.08370226891451,0.97894681802587,1.25362188757041,0.308801447160972,1.31570429747224,2.8270263351341,2.89371057406372,1.68942440653073,0.76872455576384,2.41801239211839,3.03859956177382,2.35039341457942,0.389720617678777,0,0.163565394255844,6.87980682577466,0.983091635014877,2.11312123358627,0.19998739585493,2.13383459388282,0,1.13503190713367,0,6.71421637053334,6.22077260032973,1.66262682694747,0.754773679776773,0.786329709279482,0,0.33946505990805,0.425149840203366,0,0,1.90802610392051,0,0.80057074828547,0.352675943690684,3.3687002508852,2.376481328569,2.8339315265117,2.87340946302872,2.05116364240755,0.252071696221718,2.90460460349715,2.09918339321406,1.42769420259154,5.29997679905538,2.24142474360707,4.21885776599862,4.27444964756251,3.4324388592045,3.4517996303005,0.198916222116275,6.46808823803612,1.21023041222112,6.25211208986474,0,4.25806985526251,2.36569737947272,2.76904096935418,0.781078098613847,3.30698874401895,2.53663240775627,1.64092442705466,15.8994752388583,7.44316767583941,0.175871244359621,5.366021960863,4.82131652290458,5.04425583328236,8.49751845931284,8.65116327134931,1.68534503309014,0,7.20249639637158,2.65081958609644,2.10472875401117,0.945550727071746,5.67280149649553,7.8493092850514,3.61365856806804,0,0,0,7.16627531830575,7.64799022690223,0,0,2.60787408453869,3.20684545892101,4.97318793991288,3.58508801897295,5.53007729451273,8.60454717640555,0,0,4.65725755210022,4.81124423942505,4.03268301363616,0.955538938977433,0,0,0.243835849964539,5.82685953469105,5.44112876338109,2.3196288626764,3.88568794447312,2.80727356154527,0,2.14056163399623,0.45178432815584,0,2.11347980993343,2.54674721756217,1.74847648403166,0,7.10930133086326,4.00650130072764,2.1593931382644,4.1586496045792,0,3.0586880643807,2.6315497034359,2.51385763096951,0,5.71372603538104,1.41157948686277,5.93786113499845,2.19100916473955,11.4682320851135,2.43677291357467,0.315543124386369,2.10773619591836,1.74540276136151,3.1741610430924,1.48798007266701,5.0839319149456,0.865253124247578,0.504665699340316,1.63898357945543,2.28057301820587,1.32585478664576,0,3.49200618232411,0.752122617877125,3.94049230734845,1.60778478093707,2.48750831837634,2.48239190068549,7.03672140273237,4.04709533488359,0.387533459016037,1.05527014302958,4.1488789154827,9.86530953311556,5.45716410187192,6.31378568901188,3.08009970976753,4.78199576403571,8.03288700397975,5.65522606128223,4.31437323638165,0.320182037633146,0,4.04213409479641,0,8.43465964861779,2.44137706989443,6.65756774185513,3.62292828463847,0 | |||
|short_description=p1@MID2 | |||
}} |
Latest revision as of 23:03, 18 September 2015
Short description: | p1@MID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MID2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000262843, NM_012216, NM_052817, uc004enk.2, uc004enl.2_5end |
EntrezGene: | MID2 |
HGNC: | 7096 |
UniProt: | Q9UJV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.49e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.59e-11 | 240 |
adult organism | 5.75e-11 | 114 |
endoderm-derived structure | 1.95e-09 | 160 |
endoderm | 1.95e-09 | 160 |
presumptive endoderm | 1.95e-09 | 160 |
subdivision of trunk | 5.15e-08 | 112 |
digestive system | 6.24e-08 | 145 |
digestive tract | 6.24e-08 | 145 |
primitive gut | 6.24e-08 | 145 |
subdivision of digestive tract | 3.08e-07 | 118 |
respiratory system | 5.84e-07 | 74 |
chest | 7.72e-07 | 11 |
primordium | 8.73e-07 | 160 |