FFCP PHASE1:Mm9::chr11:102808055..102808065,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:102808055..102808065,-
|short_description=p2@C1ql1
|description=CAGE_peak_2_at_C1ql1_5end
|association_with_transcript=-53bp_to_ENSMUST00000057849_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=23829 | |EntrezGene=23829 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=558 | |||
|TSSclassifier=NA | |||
|UniProt=A2AH89 | |UniProt=A2AH89 | ||
|association_with_transcript=-53bp_to_ENSMUST00000057849_5end | |||
|cluster_id=chr11:102808055..102808065,- | |||
|description=CAGE_peak_2_at_C1ql1_5end | |||
|id=chr11:102808055..102808065,- | |||
|ontology_enrichment_celltype=CL:0002319!3.70e-17!43;CL:0000221!2.39e-16!44;CL:0000133!2.39e-16!44;CL:0000055!5.93e-13!50;CL:0000540!1.50e-12!33;CL:0000047!1.50e-12!33;CL:0000031!1.50e-12!33;CL:0000404!1.50e-12!33;CL:0000393!2.72e-09!39;CL:0000211!2.72e-09!39;CL:0000107!4.49e-08!9;CL:0002453!3.87e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.67e-28,43;CL:0000221,4.05e-27,44;CL:0000133,4.05e-27,44;CL:0000540,3.89e-19,33;CL:0000047,3.89e-19,33;CL:0000031,3.89e-19,33;CL:0000404,3.89e-19,33;CL:0000393,3.86e-15,39;CL:0000211,3.86e-15,39;CL:0000107,1.82e-14,9;CL:0002321,1.31e-13,70;CL:0002453,1.28e-12,8;CL:0000333,1.03e-09,10;CL:0000095,1.03e-09,10;CL:0000243,1.03e-09,10;CL:0000123,1.03e-09,10;CL:0000125,1.03e-09,10;CL:0000030,1.03e-09,10;CL:0000339,1.03e-09,10;CL:0000128,2.02e-09,6;CL:0000126,2.02e-09,6;CL:0000127,2.02e-09,6;CL:0000117,8.34e-08,23;CL:0000337,8.34e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.51e-29!102;UBERON:0000924!5.51e-29!102;UBERON:0006601!5.51e-29!102;UBERON:0001017!3.66e-27!73;UBERON:0005743!3.66e-27!73;UBERON:0000073!2.75e-26!75;UBERON:0001016!2.75e-26!75;UBERON:0002346!2.36e-23!71;UBERON:0003075!2.36e-23!71;UBERON:0007284!2.36e-23!71;UBERON:0000033!4.46e-16!63;UBERON:0000955!2.01e-13!50;UBERON:0006238!2.01e-13!50;UBERON:0001049!3.62e-13!52;UBERON:0005068!3.62e-13!52;UBERON:0006241!3.62e-13!52;UBERON:0007135!3.62e-13!52;UBERON:0002616!7.36e-13!49;UBERON:0003056!2.39e-12!49;UBERON:0002020!9.63e-10!34;UBERON:0003080!1.22e-08!40;UBERON:0002791!1.69e-08!29;UBERON:0003528!1.69e-08!29;UBERON:0001893!1.69e-08!29;UBERON:0002780!3.44e-08!39;UBERON:0001890!3.44e-08!39;UBERON:0006240!3.44e-08!39;UBERON:0002410!4.49e-08!9;UBERON:0000153!8.03e-08!94;UBERON:0007811!1.50e-07!86;UBERON:0002342!4.38e-07!10;UBERON:0005062!4.38e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.55e-34,73;UBERON:0001016,4.65e-33,75;UBERON:0004121,1.21e-31,95;UBERON:0000924,1.21e-31,95;UBERON:0006601,1.21e-31,95;UBERON:0002346,2.64e-19,64;UBERON:0003075,2.64e-19,64;UBERON:0007284,2.64e-19,64;UBERON:0010314,2.36e-17,92;UBERON:0010371,8.46e-17,73;UBERON:0002410,1.82e-14,9;UBERON:0000073,3.24e-14,54;UBERON:0001049,1.44e-12,52;UBERON:0005068,1.44e-12,52;UBERON:0006241,1.44e-12,52;UBERON:0007135,1.44e-12,52;UBERON:0000010,2.11e-11,11;UBERON:0000955,1.26e-10,47;UBERON:0006238,1.26e-10,47;UBERON:0003056,2.62e-10,49;UBERON:0002616,8.00e-10,46;UBERON:0002020,1.22e-09,34;UBERON:0011216,6.97e-08,194;UBERON:0003528,1.01e-07,29;UBERON:0002791,1.01e-07,29;UBERON:0001893,1.01e-07,29;UBERON:0003076,2.94e-07,12;UBERON:0003057,2.94e-07,12;UBERON:0003080,3.18e-07,40 | |||
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| ||
|short_description=p2@C1ql1 | |||
}} | }} |
Latest revision as of 18:51, 26 September 2015
Short description: | p2@C1ql1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_C1ql1_5end |
Coexpression cluster: | MCL_coexpression_mm9:558 |
Association with transcript: | -53bp_to_ENSMUST00000057849_5end |
EntrezGene: | C1ql1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.67e-28 | 43 |
ectodermal cell | 4.05e-27 | 44 |
neurectodermal cell | 4.05e-27 | 44 |
neuron | 3.89e-19 | 33 |
neuronal stem cell | 3.89e-19 | 33 |
neuroblast | 3.89e-19 | 33 |
electrically signaling cell | 3.89e-19 | 33 |
electrically responsive cell | 3.86e-15 | 39 |
electrically active cell | 3.86e-15 | 39 |
autonomic neuron | 1.82e-14 | 9 |
embryonic cell | 1.31e-13 | 70 |
oligodendrocyte precursor cell | 1.28e-12 | 8 |
migratory neural crest cell | 1.03e-09 | 10 |
neuron associated cell | 1.03e-09 | 10 |
glial cell (sensu Vertebrata) | 1.03e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 1.03e-09 | 10 |
glial cell | 1.03e-09 | 10 |
glioblast | 1.03e-09 | 10 |
glioblast (sensu Vertebrata) | 1.03e-09 | 10 |
oligodendrocyte | 2.02e-09 | 6 |
macroglial cell | 2.02e-09 | 6 |
astrocyte | 2.02e-09 | 6 |
CNS neuron (sensu Vertebrata) | 8.34e-08 | 23 |
neuroblast (sensu Vertebrata) | 8.34e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.55e-34 | 73 |
nervous system | 4.65e-33 | 75 |
ectoderm-derived structure | 1.21e-31 | 95 |
ectoderm | 1.21e-31 | 95 |
presumptive ectoderm | 1.21e-31 | 95 |
neurectoderm | 2.64e-19 | 64 |
neural plate | 2.64e-19 | 64 |
presumptive neural plate | 2.64e-19 | 64 |
structure with developmental contribution from neural crest | 2.36e-17 | 92 |
ecto-epithelium | 8.46e-17 | 73 |
autonomic nervous system | 1.82e-14 | 9 |
regional part of nervous system | 3.24e-14 | 54 |
neural tube | 1.44e-12 | 52 |
neural rod | 1.44e-12 | 52 |
future spinal cord | 1.44e-12 | 52 |
neural keel | 1.44e-12 | 52 |
peripheral nervous system | 2.11e-11 | 11 |
brain | 1.26e-10 | 47 |
future brain | 1.26e-10 | 47 |
pre-chordal neural plate | 2.62e-10 | 49 |
regional part of brain | 8.00e-10 | 46 |
gray matter | 1.22e-09 | 34 |
organ system subdivision | 6.97e-08 | 194 |
brain grey matter | 1.01e-07 | 29 |
regional part of telencephalon | 1.01e-07 | 29 |
telencephalon | 1.01e-07 | 29 |
posterior neural tube | 2.94e-07 | 12 |
chordal neural plate | 2.94e-07 | 12 |
anterior neural tube | 3.18e-07 | 40 |