FFCP PHASE1:Mm9::chr6:48417827..48417837,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=273|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:48417827..48417837,+|id=chr6:48417827..48417837,+|ontology_enrichment_celltype=CL:0000239!4.54e-22!6;CL:0000677!4.54e-22!6;CL:0000212!4.54e-22!6;CL:0000584!4.54e-22!6;CL:0000075!6.49e-19!7;CL:0000473!4.47e-16!3;CL:0000627!4.47e-16!3;CL:0000682!4.47e-16!3;CL:0000066!8.90e-16!25;CL:0002563!1.06e-14!9;CL:0002251!1.06e-14!9;CL:0000223!4.61e-09!20;CL:0002076!9.01e-09!15|ontology_enrichment_celltype_v019_2=CL:0000239,8.26e-13,6;CL:0000677,8.26e-13,6;CL:0000584,8.26e-13,6;CL:0000075,3.95e-11,7;CL:0002563,7.02e-09,9;CL:0002251,7.02e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.85e-34!15;UBERON:0001242!1.36e-25!13;UBERON:0000060!1.36e-25!13;UBERON:0001262!1.36e-25!13;UBERON:0004786!1.36e-25!13;UBERON:0004923!4.51e-21!24;UBERON:0000331!3.99e-17!3;UBERON:0002116!3.99e-17!3;UBERON:0001204!3.99e-17!3;UBERON:0001168!3.99e-17!3;UBERON:0003350!1.06e-14!9;UBERON:0004808!1.06e-14!9;UBERON:0001277!1.06e-14!9;UBERON:0000485!5.21e-12!11;UBERON:0001962!1.16e-11!2;UBERON:0001961!1.16e-11!2;UBERON:0001744!1.16e-11!2;UBERON:0000160!4.72e-11!43;UBERON:0002465!4.62e-08!3;UBERON:0005409!1.12e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000331,5.51e-52,3;UBERON:0002116,5.51e-52,3;UBERON:0001204,5.51e-52,3;UBERON:0001168,5.51e-52,3;UBERON:0002108,2.84e-39,4;UBERON:0001242,6.63e-34,13;UBERON:0001262,6.63e-34,13;UBERON:0004786,6.63e-34,13;UBERON:0000344,1.68e-29,15;UBERON:0004923,9.72e-19,24;UBERON:0000160,1.14e-14,31;UBERON:0005409,6.83e-10,47;UBERON:0003350,7.02e-09,9;UBERON:0004808,7.02e-09,9;UBERON:0001277,7.02e-09,9;UBERON:0000485,1.94e-07,11|phase1_expression=0,0,0.454999239389536,0.60492842261366,0.500895729946347,5.20425742926858,6.30754129607919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.91763712426868,0.57423196411502,0.430761996159075,0.861884930743556,3.99049180858385,2.26827116783938,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:48417827..48417837,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=273 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:48417827..48417837,+ | |||
|description=CAGE_peak_at_chr6:48417827..48417837,+ | |||
|id=chr6:48417827..48417837,+ | |||
|ontology_enrichment_celltype=CL:0000239!4.54e-22!6;CL:0000677!4.54e-22!6;CL:0000212!4.54e-22!6;CL:0000584!4.54e-22!6;CL:0000075!6.49e-19!7;CL:0000473!4.47e-16!3;CL:0000627!4.47e-16!3;CL:0000682!4.47e-16!3;CL:0000066!8.90e-16!25;CL:0002563!1.06e-14!9;CL:0002251!1.06e-14!9;CL:0000223!4.61e-09!20;CL:0002076!9.01e-09!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.26e-13,6;CL:0000677,8.26e-13,6;CL:0000584,8.26e-13,6;CL:0000075,3.95e-11,7;CL:0002563,7.02e-09,9;CL:0002251,7.02e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.85e-34!15;UBERON:0001242!1.36e-25!13;UBERON:0000060!1.36e-25!13;UBERON:0001262!1.36e-25!13;UBERON:0004786!1.36e-25!13;UBERON:0004923!4.51e-21!24;UBERON:0000331!3.99e-17!3;UBERON:0002116!3.99e-17!3;UBERON:0001204!3.99e-17!3;UBERON:0001168!3.99e-17!3;UBERON:0003350!1.06e-14!9;UBERON:0004808!1.06e-14!9;UBERON:0001277!1.06e-14!9;UBERON:0000485!5.21e-12!11;UBERON:0001962!1.16e-11!2;UBERON:0001961!1.16e-11!2;UBERON:0001744!1.16e-11!2;UBERON:0000160!4.72e-11!43;UBERON:0002465!4.62e-08!3;UBERON:0005409!1.12e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000331,5.51e-52,3;UBERON:0002116,5.51e-52,3;UBERON:0001204,5.51e-52,3;UBERON:0001168,5.51e-52,3;UBERON:0002108,2.84e-39,4;UBERON:0001242,6.63e-34,13;UBERON:0001262,6.63e-34,13;UBERON:0004786,6.63e-34,13;UBERON:0000344,1.68e-29,15;UBERON:0004923,9.72e-19,24;UBERON:0000160,1.14e-14,31;UBERON:0005409,6.83e-10,47;UBERON:0003350,7.02e-09,9;UBERON:0004808,7.02e-09,9;UBERON:0001277,7.02e-09,9;UBERON:0000485,1.94e-07,11 | |||
|phase1_expression=0,0,0.454999239389536,0.60492842261366,0.500895729946347,5.20425742926858,6.30754129607919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.91763712426868,0.57423196411502,0.430761996159075,0.861884930743556,3.99049180858385,2.26827116783938,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:48417827..48417837,+ | |||
}} |
Latest revision as of 19:51, 5 August 2015
Short description: | p@chr6:48417827..48417837, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:48417827..48417837, + |
Coexpression cluster: | MCL_coexpression_mm9:273 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.26e-13 | 6 |
gut absorptive cell | 8.26e-13 | 6 |
enterocyte | 8.26e-13 | 6 |
columnar/cuboidal epithelial cell | 3.95e-11 | 7 |
intestinal epithelial cell | 7.02e-09 | 9 |
epithelial cell of alimentary canal | 7.02e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
ileal mucosa | 5.51e-52 | 3 |
ileum | 5.51e-52 | 3 |
mucosa of small intestine | 5.51e-52 | 3 |
wall of small intestine | 5.51e-52 | 3 |
small intestine | 2.84e-39 | 4 |
intestinal mucosa | 6.63e-34 | 13 |
wall of intestine | 6.63e-34 | 13 |
gastrointestinal system mucosa | 6.63e-34 | 13 |
mucosa | 1.68e-29 | 15 |
organ component layer | 9.72e-19 | 24 |
intestine | 1.14e-14 | 31 |
gastrointestinal system | 6.83e-10 | 47 |
epithelium of mucosa | 7.02e-09 | 9 |
gastrointestinal system epithelium | 7.02e-09 | 9 |
intestinal epithelium | 7.02e-09 | 9 |
simple columnar epithelium | 1.94e-07 | 11 |