FFCP PHASE1:Hg19::chr9:90112767..90112808,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1612 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2674 | |||
|TSSclassifier=strong | |||
|UniProt=P53355 | |||
|association_with_transcript=0bp_to_ENST00000408954_5end | |||
|cluster_id=chr9:90112767..90112808,+ | |||
|description=CAGE_peak_1_at_DAPK1_5end | |||
|id=chr9:90112767..90112808,+ | |||
|ontology_enrichment_celltype=CL:0000557!4.51e-23!71;CL:0000839!4.89e-21!70;CL:0000766!5.18e-21!76;CL:0002009!1.90e-20!65;CL:0002194!4.27e-20!63;CL:0000576!4.27e-20!63;CL:0000040!4.27e-20!63;CL:0000559!4.27e-20!63;CL:0002057!1.82e-18!42;CL:0000763!1.09e-17!112;CL:0000049!1.09e-17!112;CL:0000860!2.35e-16!45;CL:0000213!5.60e-11!57;CL:0000215!5.60e-11!57;CL:0002078!2.44e-10!44;CL:0000115!2.00e-08!35 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.39e-14;39!CL:0000234;3.39e-14;39!CL:0000860;1.03e-13;33!CL:0002057;1.03e-13;33!CL:0000576;1.67e-12;48!CL:0000766;6.28e-11;69!CL:0002078;1.95e-07;45!CL:0000115;2.40e-07;36!CL:0000763;5.51e-07;100!CL:1000449;7.66e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.61e-26,67;CL:0000766,3.48e-24,72;CL:0000839,5.44e-24,66;CL:0002009,9.07e-24,61;CL:0002194,1.92e-23,59;CL:0000576,1.92e-23,59;CL:0000040,1.92e-23,59;CL:0000559,1.92e-23,59;CL:0000473,5.09e-22,48;CL:0000234,5.09e-22,48;CL:0000763,3.49e-20,108;CL:0000049,3.49e-20,108;CL:0000860,7.80e-19,42;CL:0002057,7.80e-19,42;CL:0000213,3.09e-11,58;CL:0000215,3.09e-11,58;CL:0002078,1.44e-10,45;CL:0000115,1.31e-08,36;CL:0000988,4.00e-07,177;CL:1000449,7.70e-07,15;CL:1000497,9.98e-07,17;CL:0002518,9.98e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002057;6.01e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.15e-22!115;UBERON:0002193!2.26e-20!112;UBERON:0002390!5.12e-20!102;UBERON:0003061!5.12e-20!102;UBERON:0003081!7.83e-20!216;UBERON:0002371!7.88e-20!80;UBERON:0001474!1.03e-19!86;UBERON:0004765!1.02e-14!101;UBERON:0001434!1.02e-14!101;UBERON:0000926!5.95e-08!448;UBERON:0004120!5.95e-08!448;UBERON:0006603!5.95e-08!448;UBERON:0005172!6.08e-08!55;UBERON:0005173!6.08e-08!55;UBERON:0003887!6.11e-07!21;UBERON:0005631!7.92e-07!14;UBERON:0000158!7.92e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;5.23e-07;15!UBERON:0006555;7.66e-07;15!UBERON:0004819;7.66e-07;15!UBERON:0001285;7.66e-07;15!UBERON:0007684;7.66e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.48e-23,108;UBERON:0002405,7.95e-23,93;UBERON:0002371,9.47e-23,76;UBERON:0002390,9.69e-23,98;UBERON:0003061,9.69e-23,98;UBERON:0001474,2.34e-22,82;UBERON:0003081,3.47e-19,203;UBERON:0004765,1.20e-17,90;UBERON:0001434,2.55e-14,100;UBERON:0005172,2.34e-08,54;UBERON:0005173,2.34e-08,54;UBERON:0006555,2.90e-07,16;UBERON:0004819,2.90e-07,16;UBERON:0000926,3.15e-07,315;UBERON:0004120,3.15e-07,315;UBERON:0006603,3.15e-07,315;UBERON:0000353,5.61e-07,15;UBERON:0005631,6.32e-07,14;UBERON:0000158,6.32e-07,14;UBERON:0002417,7.09e-07,60;UBERON:0000916,7.09e-07,60;UBERON:0004211,7.70e-07,15;UBERON:0009773,7.70e-07,15;UBERON:0001231,7.70e-07,15;UBERON:0001285,7.70e-07,15;UBERON:0007684,7.70e-07,15;UBERON:0004208,7.70e-07,15 | |||
|phase1_expression=1.63510541343501,1.92690471501885,3.38290569830331,1.0007329835313,0.893922188854576,8.72338524100369,0,0,0.261185628199839,14.2525683170875,34.1922572306489,78.4204525947318,49.0606579504924,0.123766352960047,0.994192127183747,2.01697543935533,1.20538905604795,2.92124036154949,1.46379839637152,7.38726348460727,10.8120366359454,9.71709636582072,5.43848375549008,4.79060487755095,5.77496142136093,12.9902789771517,11.5761831124424,11.9640387596792,14.9478425202584,8.82807615623589,19.3520154145095,0,0,0,0,0,26.4240395401362,48.7515959508052,64.1742231904453,35.8067936681156,44.5591793737449,58.9486472154543,64.1363163409125,42.1654892460738,33.2530830446152,40.2689541571775,41.8372266430232,30.8375916016369,33.1385816857761,23.8784685627385,16.1381245113333,15.6078271726466,45.8511755379703,37.4381116478619,47.3992703080196,38.4014372666914,31.930019556768,31.910734791202,45.3004160708936,45.8928508718814,69.6877467120955,18.8015241106428,14.5608470063791,12.7867425159808,76.6152389979462,74.3274644345393,123.318805301124,27.1348558477283,18.7733850631273,14.7688414399479,53.8805557343698,54.5050901261596,80.3814464099846,21.5480392038181,25.9377245957353,26.207330688547,12.9177925818469,4.8056605709282,13.1794981091606,21.9459812680761,18.1014176251172,20.458385221639,0,0,0,0.853460445133014,0,0.574752439954483,0,0,0,1.17447437874188,0,58.1553845747714,56.0508562981536,18.4368859342554,0,0.786021525498329,0.205601498999509,0,0,0,0,0.891283655081389,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0,0,0,0,0.602300476311091,0.383959833463255,1.24930726552346,1.18388626022008,0.821127996921047,0,0,0,12.1903433156981,5.36560687762909,17.1335832870331,7.59022220007589,10.0267582127178,12.1671075927092,0.795285947051099,5.35298357332899,10.8715039738678,15.5210578223795,16.6886092816939,9.16853528483989,0.728590576585084,0.741568885568859,115.214324747413,126.069929804669,60.8947459176402,25.5184968006716,27.4557557174461,22.6589075811035,19.8762407366705,13.763753521698,21.8698516012784,36.1797082831366,19.2969740656557,15.4066103486438,13.7936677914295,16.2802558276677,23.8363396000096,14.7277069616455,15.3075140501476,9.88353737434066,21.4774610642389,16.1771755352182,4.86085168729056,32.8623000085414,40.1907577000844,25.4501945892308,18.397996495906,10.4419222552494,13.3737273069197,6.58902087180316,0,0,0,1.64619665163954,2.91300197789081,7.17091551872034,2.4826786753885,21.3057488054077,7.47242970107935,4.9333509683432,14.3157076283892,5.52313755485721,10.6250237023748,4.99479511228274,0.576175924479999,0.234321431833797,0,3.4228309292667,0.149448680551801,0.469737994575059,1.13311061057692,0.702254033511242,0,0.368502951935304,0.826606249406124,0,0.494533858557114,5.46096817162816,2.15585442544872,1.0100166837244,0.875829639103749,0,0.438977620880838,0.919463387397059,1.20190447125277,10.549193033882,0,0.85422955527427,0.211931901159562,0,0,0.772921620136887,0.18611685633159,0,0,0,0.276149695926898,4.20279747728911,0,0.10075209822764,0,0.57978255948989,0,0,19.0278981562169,21.7348820047236,15.5699883445155,13.4759371519982,19.681026368299,29.1981887260664,0,2.57296375277154,0,0.464367928031979,0,4.8505788016336,5.39471008249925,5.3022426574366,5.73528658208448,6.53638332277218,3.55905928666645,3.64044532032444,4.51309369788296,3.8474715694639,51.6708818237254,14.0241773803446,78.6106361642974,16.1709582524096,15.2106041786197,5.89696330006576,10.0434284135839,0,11.5609132230527,11.8381789105983,1.42675371031213,0,0,0.185176890317059,0.325808305310325,0,10.1031939417691,14.2594398119344,18.7853910777315,5.77465791044295,4.1668696131895,5.70762456703795,0,0,29.0536067183129,27.8465075515693,34.482429650985,0,7.72717789714754,2.41017665312057,0.0895585227028483,0,0.383382679165211,30.5451207495485,31.7854846787746,25.2940300959742,16.2855547361166,38.5039421950459,16.509452515964,18.7174328523556,18.7547915536075,11.9750712215894,11.9279891535855,13.8157806608202,24.2952467735991,7.17638939810309,10.899001720832,1.83345714552375,4.91232519879556,3.57656445851882,0.845302752556,0.26593811658487,0,1.80045161983499,0,0.266422179016099,7.72081165753997,1.08524321078289,9.05564370458846,0.65147236858747,9.95097456479128,5.543663110534,18.9906807547539,24.4029368408082,27.2926265927016,38.919609805181,62.2798793375837,63.2501818449095,3.35474797688216,0,0,3.61953266668948,3.90405012845728,5.55088986043676,0,2.36436912242313,0.646882724578552,1.54011643535698,7.87693335089637,13.0139853857622,14.6924874427762,5.02548796003046,7.65526501983796,5.24304916763028,2.99161459204025,4.97298616123243,0.12269149171914,0.500170521059677,0.271265023699736,1.87173775377726,2.67643483195743,5.67728694122165,8.66846470946078,1.80567659836631,2.27407504055985,9.31257641632544,2.65690239414175,2.76553752812555,0.260650843404249,1.17480694477644,2.40200396667599,4.9624326269493,10.3542816392936,11.526576242772,100.335226148712,88.2107829405634,136.98280287834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| |||
|short_description=p1@DAPK1 | |||
}} |
Latest revision as of 03:04, 18 September 2015
Short description: | p1@DAPK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DAPK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000408954_5end |
EntrezGene: | DAPK1 |
HGNC: | 2674 |
UniProt: | P53355 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.61e-26 | 67 |
myeloid leukocyte | 3.48e-24 | 72 |
myeloid lineage restricted progenitor cell | 5.44e-24 | 66 |
macrophage dendritic cell progenitor | 9.07e-24 | 61 |
monopoietic cell | 1.92e-23 | 59 |
monocyte | 1.92e-23 | 59 |
monoblast | 1.92e-23 | 59 |
promonocyte | 1.92e-23 | 59 |
defensive cell | 5.09e-22 | 48 |
phagocyte | 5.09e-22 | 48 |
myeloid cell | 3.49e-20 | 108 |
common myeloid progenitor | 3.49e-20 | 108 |
classical monocyte | 7.80e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.80e-19 | 42 |
lining cell | 3.09e-11 | 58 |
barrier cell | 3.09e-11 | 58 |
meso-epithelial cell | 1.44e-10 | 45 |
endothelial cell | 1.31e-08 | 36 |
hematopoietic cell | 4.00e-07 | 177 |
epithelial cell of nephron | 7.70e-07 | 15 |
kidney cell | 9.98e-07 | 17 |
kidney epithelial cell | 9.98e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.48e-23 | 108 |
immune system | 7.95e-23 | 93 |
bone marrow | 9.47e-23 | 76 |
hematopoietic system | 9.69e-23 | 98 |
blood island | 9.69e-23 | 98 |
bone element | 2.34e-22 | 82 |
lateral plate mesoderm | 3.47e-19 | 203 |
skeletal element | 1.20e-17 | 90 |
skeletal system | 2.55e-14 | 100 |
abdomen element | 2.34e-08 | 54 |
abdominal segment element | 2.34e-08 | 54 |
excretory tube | 2.90e-07 | 16 |
kidney epithelium | 2.90e-07 | 16 |
mesoderm | 3.15e-07 | 315 |
mesoderm-derived structure | 3.15e-07 | 315 |
presumptive mesoderm | 3.15e-07 | 315 |
parenchyma | 5.61e-07 | 15 |
extraembryonic membrane | 6.32e-07 | 14 |
membranous layer | 6.32e-07 | 14 |
abdominal segment of trunk | 7.09e-07 | 60 |
abdomen | 7.09e-07 | 60 |
nephron epithelium | 7.70e-07 | 15 |
renal tubule | 7.70e-07 | 15 |
nephron tubule | 7.70e-07 | 15 |
nephron | 7.70e-07 | 15 |
uriniferous tubule | 7.70e-07 | 15 |
nephrogenic mesenchyme | 7.70e-07 | 15 |