FFCP PHASE1:Mm9::chr6:13788652..13788689,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=64450|HGNC=|MCL_coexpression_id=1|UniProt=P60894,Q6ZWR2|association_with_transcript=-198bp_to_ENSMUST00000115492,uc009ayr.1_5end|description=CAGE_peak_1_at_Gpr85_5end|id=chr6:13788652..13788689,-|ontology_enrichment_celltype=CL:0000540!9.22e-14!33;CL:0000047!9.22e-14!33;CL:0000031!9.22e-14!33;CL:0000404!9.22e-14!33;CL:0000117!5.63e-13!23;CL:0000337!5.63e-13!23;CL:0000221!7.16e-13!44;CL:0000133!7.16e-13!44;CL:0002319!1.37e-12!43;CL:0000393!4.05e-12!39;CL:0000211!4.05e-12!39;CL:0000055!1.61e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.44e-17,23;CL:0000337,5.44e-17,23;CL:0000540,9.19e-15,33;CL:0000047,9.19e-15,33;CL:0000031,9.19e-15,33;CL:0000404,9.19e-15,33;CL:0000221,3.50e-14,44;CL:0000133,3.50e-14,44;CL:0002319,8.22e-14,43;CL:0000393,7.27e-11,39;CL:0000211,7.27e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.94e-33!73;UBERON:0005743!2.94e-33!73;UBERON:0000073!1.95e-32!75;UBERON:0001016!1.95e-32!75;UBERON:0002346!4.01e-30!71;UBERON:0003075!4.01e-30!71;UBERON:0007284!4.01e-30!71;UBERON:0004121!5.63e-29!102;UBERON:0000924!5.63e-29!102;UBERON:0006601!5.63e-29!102;UBERON:0000033!4.93e-28!63;UBERON:0001049!8.07e-28!52;UBERON:0005068!8.07e-28!52;UBERON:0006241!8.07e-28!52;UBERON:0007135!8.07e-28!52;UBERON:0000955!9.12e-27!50;UBERON:0006238!9.12e-27!50;UBERON:0002616!4.83e-26!49;UBERON:0003056!1.39e-24!49;UBERON:0003080!3.67e-22!40;UBERON:0002780!1.84e-21!39;UBERON:0001890!1.84e-21!39;UBERON:0006240!1.84e-21!39;UBERON:0002020!5.62e-20!34;UBERON:0002791!3.60e-17!29;UBERON:0003528!3.60e-17!29;UBERON:0001893!3.60e-17!29;UBERON:0000956!2.02e-12!21;UBERON:0001869!2.02e-12!21;UBERON:0000203!2.02e-12!21;UBERON:0007811!2.24e-12!86;UBERON:0000153!7.45e-12!94;UBERON:0002619!2.18e-10!17;UBERON:0002021!1.22e-07!10;UBERON:0000411!1.22e-07!10;UBERON:0001950!1.22e-07!10;UBERON:0000025!1.92e-07!114;UBERON:0004111!3.79e-07!122;UBERON:0000468!5.85e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.40e-41,73;UBERON:0001016,9.48e-40,75;UBERON:0000073,1.96e-39,54;UBERON:0002346,3.03e-39,64;UBERON:0003075,3.03e-39,64;UBERON:0007284,3.03e-39,64;UBERON:0001049,1.19e-37,52;UBERON:0005068,1.19e-37,52;UBERON:0006241,1.19e-37,52;UBERON:0007135,1.19e-37,52;UBERON:0004121,2.25e-36,95;UBERON:0000924,2.25e-36,95;UBERON:0006601,2.25e-36,95;UBERON:0000955,1.20e-33,47;UBERON:0006238,1.20e-33,47;UBERON:0002616,1.11e-32,46;UBERON:0010371,1.35e-32,73;UBERON:0003056,3.91e-32,49;UBERON:0003080,1.96e-29,40;UBERON:0002780,1.75e-28,39;UBERON:0001890,1.75e-28,39;UBERON:0006240,1.75e-28,39;UBERON:0002020,1.80e-26,34;UBERON:0010314,6.50e-26,92;UBERON:0003528,1.14e-22,29;UBERON:0002791,1.14e-22,29;UBERON:0001893,1.14e-22,29;UBERON:0000956,3.06e-16,21;UBERON:0001869,3.06e-16,21;UBERON:0000203,3.06e-16,21;UBERON:0002619,1.71e-13,17;UBERON:0002021,8.78e-10,10;UBERON:0000411,8.78e-10,10;UBERON:0001950,8.78e-10,10;UBERON:0000025,1.57e-08,114;UBERON:0003076,2.47e-08,12;UBERON:0003057,2.47e-08,12;UBERON:0002420,1.48e-07,8;UBERON:0007245,1.48e-07,8;UBERON:0010009,1.48e-07,8;UBERON:0010011,1.48e-07,8;UBERON:0000454,1.48e-07,8;UBERON:0004111,2.46e-07,122|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.550640256485045,0,2.61630187656536,1.31811709640683,1.1665793944457,1.1198913730029,0,0,0,0,0.514518872071894,0.573066879877513,0,7.28339259094552,5.81890077199236,3.80298842103708,0,0,0.449949858640699,0,0.7104801149461,1.79760066311043,1.53687322128622,4.97710139080693,4.45519596494579,3.99617426567626,4.28476476605705,5.07997644188711,6.36952155917761,4.79227355091182,5.51531271966013,7.70811166995721,8.2996769755372,8.60196586234964,7.91317726381163,7.77644970620482,8.85552729946492,7.81712397203867,9.56696437053856,7.63991238884051,7.66034322231536,11.6744778255264,8.01517617048792,0.075726193333184,0.529000920747499,0,0.860423876981386,0,0,0,0,0.421333260395256,0.681721290312231,0.259786004602869,0.35333957451034,1.69012103732017,0,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,1.1875371125186,1.21439728736295,1.21786191324856,0.230615497256059,0.301445281105245,0.587943535678524,0.502666365318702,0,0,0,0.161766849947409,0,0,5.59175283654366,16.1029438356351,13.6140359428746,1.02182822083437,0,0,0,10.9347166765521,13.2675174817402,11.0575829859321,13.3844726548053,11.2514801225345,10.5971902725376,11.5191296778108,0.81471491080253,0.248813941220186,0,0.420883711772948,2.47228841629137,2.06911893990126,3.24111833649629,1.65775299619287,1.49680298132921,2.43416068541215,1.78033276663485,2.32833033665114,0.431135985865684,0.567318240503458,0.527853372491847,0,0.556094498451196,0.696504333044333,0.61734640922383,0.398068533636986,0,0,0,1.24275463521301,1.64168241986767,0.900310307305074,1.42046841351126,0.393528463494808,0,0.465067889500816,0.268273401399619,0.116765342367169,0,0.492502392237286,0.162137619091711,0.146199987425332,0,0.134206418760372,19.1363853193356,12.9659811597898,0,0.264450566663544,0.639864751605702,0,0.515469845288373,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,1.50801125280162,0,1.36474860983384,2.69645822596266,0.648414149624083,0.398282546508734,0.189667900953082,0.456994050438915,0,0,0.387904974335251,0.0701358198903186,0.189709611372772,0.295220295959204,1.09899109488962,1.48076596706161,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.554259570499814,1.32643988239339,0.162964976442026,0.169745085775188,0.704070744865506,0.670025029767263,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,1.50791283939272,1.08781136763742,0,0.275936746304732,10.2752377592187,7.61875962849321,0.983609672260053,0.252470927204373,0.94652465824877,0.780877488593277,2.36965737506079,1.19484398976276,1.11399337041197,1.41538265394416,0.809621403349789,1.46127928955656,1.97643888973262,10.6036034419196,0.141940085208269,0.890328018336276,0.162886959353576,0.659880491890142,1.32745138339963,0.485561272309963,0,0.377210159511796,0.885905678642318,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,1.8962205476149,1.05418608574999,0,12.5962654128902,2.16073312837572,1.4229455216103,2.57204442037911,2.30542303734956,2.14042581122485,2.30368628842969,1.8267896946876,0,0,0.220528398054962,0,0.484393280087717,0.120625849856312,0,0,0,7.78786268444141,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,1.42351197111511,0.609958401380546,0.648032044930808,0.418176592028937,0.436725127492355,0.539457385539283,0.41326727862668,0,0.388844919875379,0,0,0,0.165458490457098,0.388902376688095,0,0,0.234714477291508,0,0,0.241584120826006,0,0.316011120628178,0.405450430580328,0.205421914329655,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0,0.167884616364078,0.19318959403219,0,0,0.428736758158132,0.501572104035363,10.1655331671072,10.5874804396651,16.6139698897425,10.3111909406213,9.59115527678899,11.3309084608455,9.45031500324528,13.5096360967266,8.15656336171568,9.83744592328458,0.830298780673413,2.79317411380722,1.87806966329548,1.45864030240976,0.628839487883947,0,1.33348036680969,2.47242068686673,2.56735367673452,1.01078884705519,2.02783439912192,1.88626341386076,1.40462261204824,1.72867911493147,1.66562859971278,0.952587382566147,1.50649623728312,1.35036454324594,1.23625770240992,1.03039244094078,0.685738504770831,2.30718548007139,1.1921809497366,2.0348498328526,1.41164070622996,1.69229215783353,1.46342378298218,2.89376682581627,1.49384525230448,2.24456908663095,0.830445126869219,0.985044823755635,3.27384834535751,1.08455788830176,1.73615949883027,3.49734809113124,1.16965804222704,1.07435527024149,1.53030665655075,0.441182838239031,0.695603506861264|short_description=p1@Gpr85}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=64450 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P60894,Q6ZWR2 | |||
|association_with_transcript=-198bp_to_ENSMUST00000115492,uc009ayr.1_5end | |||
|cluster_id=chr6:13788652..13788689,- | |||
|description=CAGE_peak_1_at_Gpr85_5end | |||
|id=chr6:13788652..13788689,- | |||
|ontology_enrichment_celltype=CL:0000540!9.22e-14!33;CL:0000047!9.22e-14!33;CL:0000031!9.22e-14!33;CL:0000404!9.22e-14!33;CL:0000117!5.63e-13!23;CL:0000337!5.63e-13!23;CL:0000221!7.16e-13!44;CL:0000133!7.16e-13!44;CL:0002319!1.37e-12!43;CL:0000393!4.05e-12!39;CL:0000211!4.05e-12!39;CL:0000055!1.61e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.44e-17,23;CL:0000337,5.44e-17,23;CL:0000540,9.19e-15,33;CL:0000047,9.19e-15,33;CL:0000031,9.19e-15,33;CL:0000404,9.19e-15,33;CL:0000221,3.50e-14,44;CL:0000133,3.50e-14,44;CL:0002319,8.22e-14,43;CL:0000393,7.27e-11,39;CL:0000211,7.27e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.94e-33!73;UBERON:0005743!2.94e-33!73;UBERON:0000073!1.95e-32!75;UBERON:0001016!1.95e-32!75;UBERON:0002346!4.01e-30!71;UBERON:0003075!4.01e-30!71;UBERON:0007284!4.01e-30!71;UBERON:0004121!5.63e-29!102;UBERON:0000924!5.63e-29!102;UBERON:0006601!5.63e-29!102;UBERON:0000033!4.93e-28!63;UBERON:0001049!8.07e-28!52;UBERON:0005068!8.07e-28!52;UBERON:0006241!8.07e-28!52;UBERON:0007135!8.07e-28!52;UBERON:0000955!9.12e-27!50;UBERON:0006238!9.12e-27!50;UBERON:0002616!4.83e-26!49;UBERON:0003056!1.39e-24!49;UBERON:0003080!3.67e-22!40;UBERON:0002780!1.84e-21!39;UBERON:0001890!1.84e-21!39;UBERON:0006240!1.84e-21!39;UBERON:0002020!5.62e-20!34;UBERON:0002791!3.60e-17!29;UBERON:0003528!3.60e-17!29;UBERON:0001893!3.60e-17!29;UBERON:0000956!2.02e-12!21;UBERON:0001869!2.02e-12!21;UBERON:0000203!2.02e-12!21;UBERON:0007811!2.24e-12!86;UBERON:0000153!7.45e-12!94;UBERON:0002619!2.18e-10!17;UBERON:0002021!1.22e-07!10;UBERON:0000411!1.22e-07!10;UBERON:0001950!1.22e-07!10;UBERON:0000025!1.92e-07!114;UBERON:0004111!3.79e-07!122;UBERON:0000468!5.85e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.40e-41,73;UBERON:0001016,9.48e-40,75;UBERON:0000073,1.96e-39,54;UBERON:0002346,3.03e-39,64;UBERON:0003075,3.03e-39,64;UBERON:0007284,3.03e-39,64;UBERON:0001049,1.19e-37,52;UBERON:0005068,1.19e-37,52;UBERON:0006241,1.19e-37,52;UBERON:0007135,1.19e-37,52;UBERON:0004121,2.25e-36,95;UBERON:0000924,2.25e-36,95;UBERON:0006601,2.25e-36,95;UBERON:0000955,1.20e-33,47;UBERON:0006238,1.20e-33,47;UBERON:0002616,1.11e-32,46;UBERON:0010371,1.35e-32,73;UBERON:0003056,3.91e-32,49;UBERON:0003080,1.96e-29,40;UBERON:0002780,1.75e-28,39;UBERON:0001890,1.75e-28,39;UBERON:0006240,1.75e-28,39;UBERON:0002020,1.80e-26,34;UBERON:0010314,6.50e-26,92;UBERON:0003528,1.14e-22,29;UBERON:0002791,1.14e-22,29;UBERON:0001893,1.14e-22,29;UBERON:0000956,3.06e-16,21;UBERON:0001869,3.06e-16,21;UBERON:0000203,3.06e-16,21;UBERON:0002619,1.71e-13,17;UBERON:0002021,8.78e-10,10;UBERON:0000411,8.78e-10,10;UBERON:0001950,8.78e-10,10;UBERON:0000025,1.57e-08,114;UBERON:0003076,2.47e-08,12;UBERON:0003057,2.47e-08,12;UBERON:0002420,1.48e-07,8;UBERON:0007245,1.48e-07,8;UBERON:0010009,1.48e-07,8;UBERON:0010011,1.48e-07,8;UBERON:0000454,1.48e-07,8;UBERON:0004111,2.46e-07,122 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.550640256485045,0,2.61630187656536,1.31811709640683,1.1665793944457,1.1198913730029,0,0,0,0,0.514518872071894,0.573066879877513,0,7.28339259094552,5.81890077199236,3.80298842103708,0,0,0.449949858640699,0,0.7104801149461,1.79760066311043,1.53687322128622,4.97710139080693,4.45519596494579,3.99617426567626,4.28476476605705,5.07997644188711,6.36952155917761,4.79227355091182,5.51531271966013,7.70811166995721,8.2996769755372,8.60196586234964,7.91317726381163,7.77644970620482,8.85552729946492,7.81712397203867,9.56696437053856,7.63991238884051,7.66034322231536,11.6744778255264,8.01517617048792,0.075726193333184,0.529000920747499,0,0.860423876981386,0,0,0,0,0.421333260395256,0.681721290312231,0.259786004602869,0.35333957451034,1.69012103732017,0,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,1.1875371125186,1.21439728736295,1.21786191324856,0.230615497256059,0.301445281105245,0.587943535678524,0.502666365318702,0,0,0,0.161766849947409,0,0,5.59175283654366,16.1029438356351,13.6140359428746,1.02182822083437,0,0,0,10.9347166765521,13.2675174817402,11.0575829859321,13.3844726548053,11.2514801225345,10.5971902725376,11.5191296778108,0.81471491080253,0.248813941220186,0,0.420883711772948,2.47228841629137,2.06911893990126,3.24111833649629,1.65775299619287,1.49680298132921,2.43416068541215,1.78033276663485,2.32833033665114,0.431135985865684,0.567318240503458,0.527853372491847,0,0.556094498451196,0.696504333044333,0.61734640922383,0.398068533636986,0,0,0,1.24275463521301,1.64168241986767,0.900310307305074,1.42046841351126,0.393528463494808,0,0.465067889500816,0.268273401399619,0.116765342367169,0,0.492502392237286,0.162137619091711,0.146199987425332,0,0.134206418760372,19.1363853193356,12.9659811597898,0,0.264450566663544,0.639864751605702,0,0.515469845288373,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,1.50801125280162,0,1.36474860983384,2.69645822596266,0.648414149624083,0.398282546508734,0.189667900953082,0.456994050438915,0,0,0.387904974335251,0.0701358198903186,0.189709611372772,0.295220295959204,1.09899109488962,1.48076596706161,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.554259570499814,1.32643988239339,0.162964976442026,0.169745085775188,0.704070744865506,0.670025029767263,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,1.50791283939272,1.08781136763742,0,0.275936746304732,10.2752377592187,7.61875962849321,0.983609672260053,0.252470927204373,0.94652465824877,0.780877488593277,2.36965737506079,1.19484398976276,1.11399337041197,1.41538265394416,0.809621403349789,1.46127928955656,1.97643888973262,10.6036034419196,0.141940085208269,0.890328018336276,0.162886959353576,0.659880491890142,1.32745138339963,0.485561272309963,0,0.377210159511796,0.885905678642318,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,1.8962205476149,1.05418608574999,0,12.5962654128902,2.16073312837572,1.4229455216103,2.57204442037911,2.30542303734956,2.14042581122485,2.30368628842969,1.8267896946876,0,0,0.220528398054962,0,0.484393280087717,0.120625849856312,0,0,0,7.78786268444141,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,1.42351197111511,0.609958401380546,0.648032044930808,0.418176592028937,0.436725127492355,0.539457385539283,0.41326727862668,0,0.388844919875379,0,0,0,0.165458490457098,0.388902376688095,0,0,0.234714477291508,0,0,0.241584120826006,0,0.316011120628178,0.405450430580328,0.205421914329655,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0,0.167884616364078,0.19318959403219,0,0,0.428736758158132,0.501572104035363,10.1655331671072,10.5874804396651,16.6139698897425,10.3111909406213,9.59115527678899,11.3309084608455,9.45031500324528,13.5096360967266,8.15656336171568,9.83744592328458,0.830298780673413,2.79317411380722,1.87806966329548,1.45864030240976,0.628839487883947,0,1.33348036680969,2.47242068686673,2.56735367673452,1.01078884705519,2.02783439912192,1.88626341386076,1.40462261204824,1.72867911493147,1.66562859971278,0.952587382566147,1.50649623728312,1.35036454324594,1.23625770240992,1.03039244094078,0.685738504770831,2.30718548007139,1.1921809497366,2.0348498328526,1.41164070622996,1.69229215783353,1.46342378298218,2.89376682581627,1.49384525230448,2.24456908663095,0.830445126869219,0.985044823755635,3.27384834535751,1.08455788830176,1.73615949883027,3.49734809113124,1.16965804222704,1.07435527024149,1.53030665655075,0.441182838239031,0.695603506861264 | |||
|short_description=p1@Gpr85 | |||
}} |
Latest revision as of 20:50, 26 September 2015
Short description: | p1@Gpr85 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpr85_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -198bp_to_ENSMUST00000115492, uc009ayr.1_5end |
EntrezGene: | Gpr85 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.44e-17 | 23 |
neuroblast (sensu Vertebrata) | 5.44e-17 | 23 |
neuron | 9.19e-15 | 33 |
neuronal stem cell | 9.19e-15 | 33 |
neuroblast | 9.19e-15 | 33 |
electrically signaling cell | 9.19e-15 | 33 |
ectodermal cell | 3.50e-14 | 44 |
neurectodermal cell | 3.50e-14 | 44 |
neural cell | 8.22e-14 | 43 |
electrically responsive cell | 7.27e-11 | 39 |
electrically active cell | 7.27e-11 | 39 |