FFCP PHASE1:Mm9::chr10:9904389..9904412,+: Difference between revisions
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|id=chr10:9904389..9904412,+
|short_description=p@chr10:9904389..9904412,+
|description=CAGE_peak_at_chr10:9904389..9904412,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=21 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:9904389..9904412,+ | |||
|description=CAGE_peak_at_chr10:9904389..9904412,+ | |||
|id=chr10:9904389..9904412,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.63e-09!12;CL:0000988!6.07e-09!32;CL:0002032!6.07e-09!32;CL:0000037!6.07e-09!32;CL:0000566!6.07e-09!32;CL:0000837!6.07e-09!32;CL:0000791!9.36e-09!9;CL:0000789!9.36e-09!9;CL:0002420!9.36e-09!9;CL:0002419!9.36e-09!9;CL:0000790!9.36e-09!9;CL:0000542!3.83e-08!13;CL:0000051!3.83e-08!13;CL:0000084!4.61e-08!11;CL:0000827!4.61e-08!11;CL:0000624!1.53e-07!8;CL:0002031!2.03e-07!25;CL:0000738!7.44e-07!17;CL:0002087!7.44e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.47e-11,9;CL:0000789,2.47e-11,9;CL:0002420,2.47e-11,9;CL:0002419,2.47e-11,9;CL:0000790,2.47e-11,9;CL:0000084,2.63e-09,11;CL:0000827,2.63e-09,11;CL:0000838,1.52e-08,12;CL:0000542,6.73e-08,13;CL:0000051,6.73e-08,13;CL:0000815,1.20e-07,1;CL:0000792,1.20e-07,1;CL:0000625,1.38e-07,1;CL:0000624,1.49e-07,8;CL:0002320,1.69e-07,46;CL:0000134,1.69e-07,46;CL:0000213,4.21e-07,1;CL:0002078,4.21e-07,1;CL:0000115,4.21e-07,1;CL:0002262,4.21e-07,1;CL:1000398,4.21e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.38e-13!23;UBERON:0000974!5.38e-13!23;UBERON:0004807!5.38e-13!23;UBERON:0005058!5.38e-13!23;UBERON:0003351!5.38e-13!23;UBERON:0009113!5.38e-13!23;UBERON:0003295!5.38e-13!23;UBERON:0009722!5.38e-13!23;UBERON:0005562!5.38e-13!23;UBERON:0007690!5.38e-13!23;UBERON:0002193!5.69e-13!48;UBERON:0006562!3.27e-12!24;UBERON:0003408!3.27e-12!24;UBERON:0001557!3.27e-12!24;UBERON:0001042!3.27e-12!24;UBERON:0008814!3.27e-12!24;UBERON:0009145!3.27e-12!24;UBERON:0002390!4.06e-12!45;UBERON:0003061!4.06e-12!45;UBERON:0002405!7.33e-12!70;UBERON:0004177!1.04e-11!29;UBERON:0000072!3.17e-10!27;UBERON:0005057!1.20e-09!51;UBERON:0000063!1.47e-07!35;UBERON:0003081!4.76e-07!88;UBERON:0002368!8.50e-07!60;UBERON:0003929!9.10e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.69e-07,46;UBERON:0002394,4.21e-07,1;UBERON:0001281,4.21e-07,1;UBERON:0000353,4.21e-07,1;UBERON:0003497,4.21e-07,1;UBERON:0003909,4.21e-07,1;UBERON:0003928,4.21e-07,1;UBERON:0003835,4.21e-07,1;UBERON:0003513,4.21e-07,1;UBERON:0001280,4.21e-07,1;UBERON:0004647,4.21e-07,1;UBERON:0002294,4.21e-07,1;UBERON:0001173,4.21e-07,1;UBERON:0004912,4.21e-07,1;UBERON:0005171,4.21e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,6.97265946584512,0.84473233291,0.234064526321993,0.513653904676515,0,3.42401459862411,0.874204024189974,0,1.01237633694913,0,0.157731082679119,0.274228867211478,0.42438965179803,0.0850432901510698,0.0992909512008853,0,0.159992422793407,0,0,0,0,0.570070258369122,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,2.90144856804538,5.04140698713696,0,0,0,0,0,0,0,0,0,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,1.07833612055328,0.599902730993408,0.635351135365324,0,0,0,0,0.255715457330331,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.38992817423824,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0,0,0,0.964887042726734,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0.683483523191411,0,0,0,0,0.228778173206523,1.86976272993241,3.07893195112048,1.93479963326193,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0.608175645870493,0.718976700153791,0,0.179026695667481,0.198681354781265,0.961563596159751,1.18151621739662,1.11063094942962,0.15241361331,0.604957110821043,0.292373642219257,0.673482891482306,1.28564592399726,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,6.97265946584512,0.84473233291,0.234064526321993,0.513653904676515,0,3.42401459862411,0.874204024189974,0,1.01237633694913,0,0.157731082679119,0.274228867211478,0.42438965179803,0.0850432901510698,0.0992909512008853,0,0.159992422793407,0,0,0,0,0.570070258369122,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,2.90144856804538,5.04140698713696,0,0,0,0,0,0,0,0,0,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,1.07833612055328,0.599902730993408,0.635351135365324,0,0,0,0,0.255715457330331,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.38992817423824,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0,0,0,0.964887042726734,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0.683483523191411,0,0,0,0,0.228778173206523,1.86976272993241,3.07893195112048,1.93479963326193,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0.608175645870493,0.718976700153791,0,0.179026695667481,0.198681354781265,0.961563596159751,1.18151621739662,1.11063094942962,0.15241361331,0.604957110821043,0.292373642219257,0.673482891482306,1.28564592399726,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr10:9904389..9904412,+ | |||
}} | }} |
Latest revision as of 02:42, 5 August 2015
Short description: | p@chr10:9904389..9904412, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:9904389..9904412, + |
Coexpression cluster: | MCL_coexpression_mm9:21 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.47e-11 | 9 |
alpha-beta T cell | 2.47e-11 | 9 |
immature T cell | 2.47e-11 | 9 |
mature T cell | 2.47e-11 | 9 |
immature alpha-beta T cell | 2.47e-11 | 9 |
T cell | 2.63e-09 | 11 |
pro-T cell | 2.63e-09 | 11 |
lymphoid lineage restricted progenitor cell | 1.52e-08 | 12 |
lymphocyte | 6.73e-08 | 13 |
common lymphoid progenitor | 6.73e-08 | 13 |
regulatory T cell | 1.20e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.20e-07 | 1 |
CD8-positive, alpha-beta T cell | 1.38e-07 | 1 |
CD4-positive, alpha-beta T cell | 1.49e-07 | 8 |
connective tissue cell | 1.69e-07 | 46 |
mesenchymal cell | 1.69e-07 | 46 |
lining cell | 4.21e-07 | 1 |
meso-epithelial cell | 4.21e-07 | 1 |
endothelial cell | 4.21e-07 | 1 |
endothelial cell of sinusoid | 4.21e-07 | 1 |
endothelial cell of hepatic sinusoid | 4.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.69e-07 | 46 |
bile duct | 4.21e-07 | 1 |
hepatic sinusoid | 4.21e-07 | 1 |
parenchyma | 4.21e-07 | 1 |
abdomen blood vessel | 4.21e-07 | 1 |
sinusoid | 4.21e-07 | 1 |
digestive system duct | 4.21e-07 | 1 |
abdominal segment blood vessel | 4.21e-07 | 1 |
trunk blood vessel | 4.21e-07 | 1 |
liver parenchyma | 4.21e-07 | 1 |
liver lobule | 4.21e-07 | 1 |
biliary system | 4.21e-07 | 1 |
biliary tree | 4.21e-07 | 1 |
biliary bud | 4.21e-07 | 1 |
hepatic duct | 4.21e-07 | 1 |