FFCP PHASE1:Hg19::chr9:37034280..37034297,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5079 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8619 | |||
|TSSclassifier=strong | |||
|UniProt=Q02548 | |||
|association_with_transcript=-177bp_to_ENST00000358127_5end | |||
|cluster_id=chr9:37034280..37034297,- | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_6_at_PAX5_5end | |||
|id=chr9:37034280..37034297,- | |||
|ontology_enrichment_celltype=CL:0000945!4.15e-71!24;CL:0000826!4.15e-71!24;CL:0000236!3.54e-40!14;CL:0000542!2.20e-35!53;CL:0000051!2.20e-35!53;CL:0000838!6.76e-33!52;CL:0002087!6.88e-18!119;CL:0000738!3.06e-14!140;CL:0000817!1.26e-12!3;CL:0000842!1.18e-11!3;CL:0002031!1.29e-11!124;CL:0000037!2.04e-10!172;CL:0000566!2.04e-10!172;CL:0000988!1.67e-09!182;CL:0000785!6.59e-09!2;CL:0000955!6.59e-09!2;CL:0000818!6.59e-09!2;CL:0000954!6.59e-09!2;CL:0000816!6.59e-09!2;CL:0000224!7.37e-09!4;CL:0002032!2.65e-08!165;CL:0000837!2.65e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.55e-94;24!CL:0000236;4.61e-60;13!CL:0000542;1.72e-29;53!CL:0000817;3.25e-09;1!CL:0000785;3.25e-09;1!CL:0000819;3.25e-09;1!CL:0002087;1.32e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.50e-94,24;CL:0000826,2.50e-94,24;CL:0000236,6.41e-56,14;CL:0000542,3.28e-46,53;CL:0000051,3.28e-46,53;CL:0000838,5.43e-42,52;CL:0002087,2.09e-19,115;CL:0002031,2.53e-16,120;CL:0000738,6.16e-16,136;CL:0002032,5.63e-13,161;CL:0000837,5.63e-13,161;CL:0000037,2.65e-12,168;CL:0000988,1.62e-11,177;CL:0000817,2.71e-11,3;CL:0000819,5.28e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.72e-29;53!UBERON:0001045;3.25e-09;1 | |||
|ontology_enrichment_disease=DOID:0060058!6.53e-19!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.45e-13;10!DOID:630;1.49e-09;1!DOID:0050177;1.49e-09;1!DOID:0050427;1.49e-09;1!DOID:0060073;3.25e-09;1!DOID:8675;3.25e-09;1!DOID:12603;3.25e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.68e-13,10;DOID:630,1.69e-09,1;DOID:0050177,1.69e-09,1;DOID:0050427,1.69e-09,1;DOID:12603,4.15e-09,1;DOID:0060073,5.28e-09,1;DOID:8675,5.28e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.02e-13!7;UBERON:0002106!2.10e-12!3;UBERON:0004854!2.10e-12!3;UBERON:0009034!2.10e-12!3;UBERON:0002095!2.10e-12!3;UBERON:0004782!2.10e-12!3;UBERON:0003281!2.10e-12!3;UBERON:0009664!2.10e-12!3;UBERON:0002296!2.10e-12!3;UBERON:0005602!2.10e-12!3;UBERON:0001179!2.10e-12!3;UBERON:0006293!2.10e-12!3;UBERON:0000178!1.48e-11!15;UBERON:0000179!1.48e-11!15;UBERON:0000463!1.48e-11!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.25e-09;1!UBERON:0000029;3.25e-09;1!UBERON:0001154;3.25e-09;1!UBERON:0001153;3.25e-09;1!UBERON:0009854;3.25e-09;1!UBERON:0001961;3.25e-09;1!UBERON:0001744;3.25e-09;1!UBERON:0001042;3.25e-09;1!UBERON:0001735;3.25e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.99e-09,1;UBERON:0001961,1.99e-09,1;UBERON:0001744,1.99e-09,1;UBERON:0001735,1.99e-09,1;UBERON:0001154,3.00e-09,1;UBERON:0001153,3.00e-09,1;UBERON:0001045,3.00e-09,1;UBERON:0000029,3.25e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36881557818649,2.62721886239826,2.36132343941038,0,0,0,0,0,0,3.56349122669387,1.84820002233648,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,1.77901850772711,1.70692089026603,3.60356388332411,0,1.98313461835459,0.954053754535364,15.9379631350646,8.80855784056408,3.82273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,1.23408681925858,1.29694662238543,0,0.79312517629427,0,0,0,1.30062222588003,1.44269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.508039992394707,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0,4.14094834495046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.921871900446234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.905777061400041,0,0,0,0,0,0,0,0,0,0.751871343838829,1.28915775947154,0.799529247399431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0.129177819672012,0.186224142887574,0,0,0,0,0,1.95320953742304,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.40891655513718,2.24397944612263 | |||
|short_description=p6@PAX5 | |||
}} |
Latest revision as of 10:21, 17 September 2015
Short description: | p6@PAX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PAX5_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -177bp_to_ENST00000358127_5end |
EntrezGene: | PAX5 |
HGNC: | 8619 |
UniProt: | Q02548 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.50e-94 | 24 |
pro-B cell | 2.50e-94 | 24 |
B cell | 6.41e-56 | 14 |
lymphocyte | 3.28e-46 | 53 |
common lymphoid progenitor | 3.28e-46 | 53 |
lymphoid lineage restricted progenitor cell | 5.43e-42 | 52 |
nongranular leukocyte | 2.09e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 2.53e-16 | 120 |
leukocyte | 6.16e-16 | 136 |
hematopoietic oligopotent progenitor cell | 5.63e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.63e-13 | 161 |
hematopoietic stem cell | 2.65e-12 | 168 |
hematopoietic cell | 1.62e-11 | 177 |
precursor B cell | 2.71e-11 | 3 |
B-1 B cell | 5.28e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.99e-09 | 1 |
mucosa-associated lymphoid tissue | 1.99e-09 | 1 |
lymphoid tissue | 1.99e-09 | 1 |
tonsillar ring | 1.99e-09 | 1 |
vermiform appendix | 3.00e-09 | 1 |
caecum | 3.00e-09 | 1 |
midgut | 3.00e-09 | 1 |
lymph node | 3.25e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.68e-13 | 10 |
genetic disease | 1.69e-09 | 1 |
monogenic disease | 1.69e-09 | 1 |
xeroderma pigmentosum | 1.69e-09 | 1 |
acute leukemia | 4.15e-09 | 1 |
lymphatic system cancer | 5.28e-09 | 1 |
lymphosarcoma | 5.28e-09 | 1 |