FFCP PHASE1:Hg19::chr9:37034258..37034270,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5079 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8619 | |||
|TSSclassifier=strong | |||
|UniProt=Q02548 | |||
|association_with_transcript=-155bp_to_ENST00000358127_5end | |||
|cluster_id=chr9:37034258..37034270,- | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_3_at_PAX5_5end | |||
|id=chr9:37034258..37034270,- | |||
|ontology_enrichment_celltype=CL:0000945!2.78e-57!24;CL:0000826!2.78e-57!24;CL:0000236!3.81e-37!14;CL:0000542!1.54e-26!53;CL:0000051!1.54e-26!53;CL:0000838!9.84e-25!52;CL:0002087!1.18e-14!119;CL:0000738!4.74e-13!140;CL:0000037!2.24e-11!172;CL:0000566!2.24e-11!172;CL:0000988!3.02e-10!182;CL:0002031!1.21e-09!124;CL:0000817!2.51e-09!3;CL:0002032!6.64e-09!165;CL:0000837!6.64e-09!165;CL:0000842!1.31e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;7.80e-101;24!CL:0000236;2.57e-60;13!CL:0000542;1.85e-29;53!CL:0000226;5.28e-14;3!CL:0000842;5.28e-14;3!CL:0002087;1.18e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.40e-101,24;CL:0000826,8.40e-101,24;CL:0000236,1.33e-64,14;CL:0000542,7.76e-47,53;CL:0000051,7.76e-47,53;CL:0000838,1.34e-43,52;CL:0002087,7.38e-24,115;CL:0000738,2.98e-19,136;CL:0002031,1.17e-15,120;CL:0000817,2.94e-15,3;CL:0000037,1.91e-14,168;CL:0000226,5.40e-14,3;CL:0000842,5.40e-14,3;CL:0000988,2.09e-13,177;CL:0002032,1.44e-11,161;CL:0000837,1.44e-11,161;CL:0000785,1.49e-10,2;CL:0000955,1.49e-10,2;CL:0000818,1.49e-10,2;CL:0000954,1.49e-10,2;CL:0000816,1.49e-10,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.85e-29;53!UBERON:0004872;7.76e-11;7!CL:0000954;1.35e-10;2 | |||
|ontology_enrichment_disease=DOID:0060058!8.49e-13!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.21e-17;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.48e-17,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.80e-23!15;UBERON:0000179!6.80e-23!15;UBERON:0000463!6.80e-23!15;UBERON:0007023!1.34e-10!115;UBERON:0004177!2.81e-09!7;UBERON:0002106!6.11e-09!3;UBERON:0004854!6.11e-09!3;UBERON:0009034!6.11e-09!3;UBERON:0002095!6.11e-09!3;UBERON:0004782!6.11e-09!3;UBERON:0003281!6.11e-09!3;UBERON:0009664!6.11e-09!3;UBERON:0002296!6.11e-09!3;UBERON:0005602!6.11e-09!3;UBERON:0001179!6.11e-09!3;UBERON:0006293!6.11e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.98e-28;15!UBERON:0000179;2.98e-28;15!UBERON:0000463;2.98e-28;15!UBERON:0002390;4.95e-20;32!UBERON:0002106;1.78e-14;3!UBERON:0002193;2.30e-14;42!UBERON:0004177;7.01e-09;5!UBERON:0005057;7.01e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.75e-28,15;UBERON:0000179,3.75e-28,15;UBERON:0000463,3.75e-28,15;UBERON:0002106,1.41e-14,3;UBERON:0004854,1.41e-14,3;UBERON:0009034,1.41e-14,3;UBERON:0002095,1.41e-14,3;UBERON:0004782,1.41e-14,3;UBERON:0003281,1.41e-14,3;UBERON:0009664,1.41e-14,3;UBERON:0002296,1.41e-14,3;UBERON:0005602,1.41e-14,3;UBERON:0001179,1.41e-14,3;UBERON:0006293,1.41e-14,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20936304141395,4.67973359864691,4.95877922276179,0,0,0.154816123316076,0,0,0,9.5284656713771,5.40243083452202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,6.00752472388345,2.66852776159066,3.41384178053206,5.20514783146816,3.4485146397269,7.93253847341835,1.90810750907073,44.9678245596464,45.8045007709332,34.4045905312706,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,1.94142780736755,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,0.569647187174163,2.38231775457789,1.64544909234478,2.59389324477087,2.16012574895246,3.96562588147135,0,0,0,7.9895365304059,8.94469120453958,0,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,2.76283915531148,0,0,3.56945935837101,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,7.11573677941097,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,1.01607998478941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,3.47316215268366,0,15.8330377895165,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25853423006768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53514772622714,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,1.87967835959707,4.31867849422967,2.69841120997308,0,0,0,0.730336388246517,1.37618785021362,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0.258355639344024,0.620747142958579,0,0,0,0,0,7.34137377859004,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,3.62292828463847,2.56454793842586 | |||
|short_description=p3@PAX5 | |||
}} |
Latest revision as of 10:19, 17 September 2015
Short description: | p3@PAX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAX5_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -155bp_to_ENST00000358127_5end |
EntrezGene: | PAX5 |
HGNC: | 8619 |
UniProt: | Q02548 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.40e-101 | 24 |
pro-B cell | 8.40e-101 | 24 |
B cell | 1.33e-64 | 14 |
lymphocyte | 7.76e-47 | 53 |
common lymphoid progenitor | 7.76e-47 | 53 |
lymphoid lineage restricted progenitor cell | 1.34e-43 | 52 |
nongranular leukocyte | 7.38e-24 | 115 |
leukocyte | 2.98e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 1.17e-15 | 120 |
precursor B cell | 2.94e-15 | 3 |
hematopoietic stem cell | 1.91e-14 | 168 |
single nucleate cell | 5.40e-14 | 3 |
mononuclear cell | 5.40e-14 | 3 |
hematopoietic cell | 2.09e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.44e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-11 | 161 |
mature B cell | 1.49e-10 | 2 |
pre-B-II cell | 1.49e-10 | 2 |
transitional stage B cell | 1.49e-10 | 2 |
small pre-B-II cell | 1.49e-10 | 2 |
immature B cell | 1.49e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.75e-28 | 15 |
haemolymphatic fluid | 3.75e-28 | 15 |
organism substance | 3.75e-28 | 15 |
spleen | 1.41e-14 | 3 |
gastrointestinal system mesentery | 1.41e-14 | 3 |
stomach region | 1.41e-14 | 3 |
mesentery | 1.41e-14 | 3 |
gastrointestinal system serosa | 1.41e-14 | 3 |
mesentery of stomach | 1.41e-14 | 3 |
gut mesentery | 1.41e-14 | 3 |
dorsal mesentery | 1.41e-14 | 3 |
dorsal mesogastrium | 1.41e-14 | 3 |
peritoneal cavity | 1.41e-14 | 3 |
spleen primordium | 1.41e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.48e-17 | 10 |