FFCP PHASE1:Hg19::chr9:27524283..27524289,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56832 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21714 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P0W0 | |||
|association_with_transcript=-22bp_to_ENST00000276943,NM_020124,uc003zqp.2_5end | |||
|cluster_id=chr9:27524283..27524289,+ | |||
|coexpression_cluster_id=C585 | |||
|description=CAGE_peak_3_at_IFNK_5end | |||
|id=chr9:27524283..27524289,+ | |||
|ontology_enrichment_celltype=CL:0000244!2.52e-32!4;CL:0000731!2.52e-32!4;CL:0002159!1.30e-27!13;CL:0000240!9.56e-22!6;CL:0000311!9.56e-22!6;CL:0000079!9.56e-22!6;CL:0000237!9.56e-22!6;CL:0000036!9.56e-22!6;CL:0000357!9.56e-22!6;CL:0000114!9.56e-22!6;CL:0002166!2.05e-20!3;CL:0000362!1.14e-16!8;CL:0002336!3.17e-15!1;CL:0002261!3.17e-15!1;CL:0002170!3.17e-15!1;CL:0000312!2.38e-12!5;CL:0002077!6.59e-11!33;CL:0000317!1.61e-08!2;CL:1000448!1.61e-08!2;CL:0002308!1.61e-08!2;CL:0002140!1.61e-08!2;CL:0000035!6.17e-07!20;CL:0000221!8.97e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002166;6.91e-39;3!CL:0002159;8.89e-33;14!CL:0000317;2.37e-15;2!CL:1000448;2.37e-15;2!CL:0002308;2.37e-15;2!CL:0002140;2.37e-15;2!CL:0000362;1.58e-13;9!CL:0002077;5.54e-12;34!CL:0000244;2.43e-08;4!CL:0000731;2.43e-08;4!CL:0000312;5.70e-07;5!CL:0000622;6.39e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,6.91e-39,3;CL:0002159,8.19e-33,14;CL:0000317,2.05e-15,2;CL:1000448,2.05e-15,2;CL:0002308,2.05e-15,2;CL:0002140,2.05e-15,2;CL:0002077,7.03e-14,34;CL:0000362,1.49e-13,9;CL:0000244,2.61e-08,4;CL:0000731,2.61e-08,4;CL:0000312,5.70e-07,5;CL:0000622,6.04e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:225!2.75e-15!1;DOID:74!2.67e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!5.10e-26!5;UBERON:0005910!8.29e-22!6;UBERON:0001708!1.44e-15!4;UBERON:0001704!1.44e-15!4;UBERON:0002090!1.07e-10!6;UBERON:0001003!8.70e-10!14;UBERON:0007376!8.70e-10!14;UBERON:0007383!8.70e-10!14;UBERON:0002419!1.61e-08!2;UBERON:0007771!1.61e-08!2;UBERON:0003297!1.61e-08!2;UBERON:0001821!1.61e-08!2;UBERON:0003487!1.61e-08!2;UBERON:0001820!1.61e-08!2;UBERON:0005089!1.61e-08!2;UBERON:0005088!1.61e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.78e-29;4!UBERON:0008895;1.78e-29;4!UBERON:0011159;8.09e-24;5!UBERON:0002419;2.37e-15;2!UBERON:0007771;2.37e-15;2!UBERON:0003297;2.37e-15;2!UBERON:0001821;2.37e-15;2!UBERON:0003487;2.37e-15;2!UBERON:0001820;2.37e-15;2!UBERON:0011137;2.07e-11;11!UBERON:0010323;2.07e-11;11!UBERON:0001003;1.65e-08;15!UBERON:0007376;1.65e-08;15!UBERON:0000075;3.83e-08;16!UBERON:0000365;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,1.78e-29,4;UBERON:0008895,1.78e-29,4;UBERON:0011159,8.09e-24,5;UBERON:0010188,4.86e-20,6;UBERON:0002539,4.86e-20,6;UBERON:0008816,4.86e-20,6;UBERON:0002419,2.05e-15,2;UBERON:0007771,2.05e-15,2;UBERON:0003297,2.05e-15,2;UBERON:0001821,2.05e-15,2;UBERON:0003487,2.05e-15,2;UBERON:0001820,2.05e-15,2;UBERON:0005089,2.05e-15,2;UBERON:0005088,2.05e-15,2;UBERON:0010323,2.07e-11,11;UBERON:0011137,3.58e-09,14;UBERON:0001003,1.59e-08,15;UBERON:0007376,1.59e-08,15;UBERON:0007383,1.59e-08,15;UBERON:0000075,3.83e-08,16;UBERON:0008814,2.44e-07,18;UBERON:0000365,6.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,3.71957197923034,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6381234608803,27.6461439622654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87132768998086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.563197838382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40321661844844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@IFNK | |||
}} |
Latest revision as of 01:24, 17 September 2015
Short description: | p3@IFNK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IFNK_5end |
Coexpression cluster: | C585_Mallassezderived_amniotic_Small_chorionic_nasal_Keratinocyte_Sebocyte |
Association with transcript: | -22bp_to_ENST00000276943, NM_020124, uc003zqp.2_5end |
EntrezGene: | IFNK |
HGNC: | 21714 |
UniProt: | Q9P0W0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 6.91e-39 | 3 |
general ecto-epithelial cell | 8.19e-33 | 14 |
sebum secreting cell | 2.05e-15 | 2 |
epithelial cell of sweat gland | 2.05e-15 | 2 |
epithelial cell of skin gland | 2.05e-15 | 2 |
acinar cell of sebaceous gland | 2.05e-15 | 2 |
ecto-epithelial cell | 7.03e-14 | 34 |
epidermal cell | 1.49e-13 | 9 |
transitional epithelial cell | 2.61e-08 | 4 |
urothelial cell | 2.61e-08 | 4 |
keratinocyte | 5.70e-07 | 5 |
acinar cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 1.78e-29 | 4 |
splanchnocranium | 1.78e-29 | 4 |
primary subdivision of cranial skeletal system | 8.09e-24 | 5 |
protuberance | 4.86e-20 | 6 |
pharyngeal arch | 4.86e-20 | 6 |
embryonic head | 4.86e-20 | 6 |
skin gland | 2.05e-15 | 2 |
epidermis gland | 2.05e-15 | 2 |
gland of integumental system | 2.05e-15 | 2 |
sebaceous gland | 2.05e-15 | 2 |
skin sebaceous gland | 2.05e-15 | 2 |
sweat gland | 2.05e-15 | 2 |
sweat gland placode | 2.05e-15 | 2 |
sebaceous gland placode | 2.05e-15 | 2 |
cranial skeletal system | 2.07e-11 | 11 |
axial skeletal system | 3.58e-09 | 14 |
skin epidermis | 1.59e-08 | 15 |
outer epithelium | 1.59e-08 | 15 |
enveloping layer of ectoderm | 1.59e-08 | 15 |
subdivision of skeletal system | 3.83e-08 | 16 |
pharyngeal arch system | 2.44e-07 | 18 |
urothelium | 6.77e-07 | 5 |