FFCP PHASE1:Hg19::chr9:21995059..21995080,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100048912 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=34341 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=269bp_to_ENST00000428597,NR_003529,uc003zpm.2,uc010miw.1,uc010mix.1_5end | |||
|cluster_id=chr9:21995059..21995080,+ | |||
|description=CAGE_peak_2_at_CDKN2B-AS_5end | |||
|id=chr9:21995059..21995080,+ | |||
|ontology_enrichment_celltype=CL:0000860!5.92e-20!45;CL:0002031!1.95e-19!124;CL:0002057!8.51e-19!42;CL:0002087!1.63e-18!119;CL:0000738!6.29e-18!140;CL:0000839!2.33e-15!70;CL:0000557!3.01e-15!71;CL:0002009!4.98e-15!65;CL:0002194!1.87e-14!63;CL:0000576!1.87e-14!63;CL:0000040!1.87e-14!63;CL:0000559!1.87e-14!63;CL:0002032!3.88e-14!165;CL:0000837!3.88e-14!165;CL:0000037!1.21e-13!172;CL:0000566!1.21e-13!172;CL:0000988!4.45e-13!182;CL:0000766!9.82e-13!76;CL:0000134!5.38e-12!358;CL:0000003!1.94e-11!722;CL:0002320!6.46e-11!365;CL:0000048!6.53e-11!430;CL:0000063!1.04e-10!578;CL:0000723!1.38e-10!436;CL:0000012!1.44e-10!682;CL:0000548!2.16e-10!679;CL:0000004!2.16e-10!679;CL:0000255!2.16e-10!679;CL:0000219!3.08e-10!390;CL:0000034!1.24e-09!444;CL:0000763!1.36e-09!112;CL:0000049!1.36e-09!112;CL:0002371!9.71e-08!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.48e-15;33!CL:0002057;5.48e-15;33!CL:0000473;1.39e-11;39!CL:0000234;1.39e-11;39!CL:0000576;1.50e-11;48!CL:0000766;2.51e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.30e-24,42;CL:0002057,5.30e-24,42;CL:0000473,6.26e-22,48;CL:0000234,6.26e-22,48;CL:0002031,6.47e-21,120;CL:0000738,1.95e-19,136;CL:0002032,5.52e-19,161;CL:0000837,5.52e-19,161;CL:0002087,9.16e-19,115;CL:0000839,7.71e-18,66;CL:0000037,9.88e-18,168;CL:0002009,4.08e-17,61;CL:0000557,4.60e-17,67;CL:0002194,6.73e-17,59;CL:0000576,6.73e-17,59;CL:0000040,6.73e-17,59;CL:0000559,6.73e-17,59;CL:0000988,3.79e-16,177;CL:0000766,4.10e-16,72;CL:0000763,6.07e-15,108;CL:0000049,6.07e-15,108;CL:0002393,1.29e-08,9;CL:0002397,1.29e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.46e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.58e-16!80;UBERON:0001474!9.98e-15!86;UBERON:0004765!5.65e-14!101;UBERON:0001434!5.65e-14!101;UBERON:0002390!7.80e-14!102;UBERON:0003061!7.80e-14!102;UBERON:0002193!1.10e-12!112;UBERON:0002384!1.94e-12!375;UBERON:0002405!1.08e-09!115;UBERON:0002204!2.52e-09!167;UBERON:0003081!2.37e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.82e-09;9!UBERON:0001557;7.82e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.04e-18,76;UBERON:0001474,1.43e-17,82;UBERON:0002405,1.28e-14,93;UBERON:0004765,1.32e-14,90;UBERON:0001434,9.34e-14,100;UBERON:0002390,1.75e-13,98;UBERON:0003061,1.75e-13,98;UBERON:0002193,1.59e-11,108;UBERON:0001737,2.40e-09,9;UBERON:0002384,1.41e-07,371;UBERON:0001557,1.68e-07,19;UBERON:0002204,6.15e-07,167 | |||
|phase1_expression=0.726713517082227,0.428201047781966,1.40954404095971,0,0.893922188854576,0,0,0.631719873426831,0.783556884599516,0,0,0.873765488520689,0.263766978228454,0.37129905888014,0,0.672325146451775,0,0.730310090387373,0.975865597581014,0.738726348460727,0.816002764977012,0.313454721478088,0.286235987131057,1.64249310087461,0.251085279189606,0.152826811495903,0.164201178899891,0.157421562627358,1.57345710739562,3.45446458287491,2.01260960310899,0.919421224478927,0.90361775633475,0.739508020333575,1.78174561334694,1.84820002233648,0,4.43196326825502,5.81578897663411,2.82114131930607,0,0.32389366601898,0.257575567634187,1.30858414901608,0.755751887377619,1.4555043671269,2.32429036905685,1.6446715520873,0.929119112685311,1.43846196161075,1.2808035326455,1.6553756092201,3.10271112662957,3.22742341791913,2.70852973188684,0.941211697713023,2.72906150057846,1.12361742222542,3.36692281607993,2.24650318953266,2.55734850319616,1.31940520074686,1.19678194572979,1.70489900213078,2.90209238628584,5.10646702222026,4.35975574296902,1.50749199154046,2.60741459210101,0.65156653411535,5.44859552370032,7.36555271975129,6.64571013625857,1.47878700418359,1.70083439972035,1.46761051855863,0.44931452458598,0.750884464207532,2.08943262706204,1.99508920618874,1.59133341759272,1.82664153764634,1.75996244461323,0.546138611262131,0,0.426730222566507,0,0.574752439954483,1.32208974556972,0.954053754535364,2.84606484554724,0.587237189370939,2.6759125968766,0,2.80254281490768,0.263384084775077,0.786839080455332,1.57204305099666,1.64481199199607,5.3499678525017,0.977766799900771,0,0,2.00538822393312,2.94605907474837,1.10766947291811,0.812411591295047,2.81800903396485,3.51160238411671,3.28875809207352,6.63240042686036,4.34704628602579,0.296573126324121,0,0,2.60611488204402,2.68254345521345,0.68725489096526,1.77113784413652,0,0.651083453856419,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,2.01606743224732,3.7441627409691,1.30341963494519,0,0.670700859703636,0.383587685530591,0.722878304769133,0,0.434539556882471,0.795285947051099,0.973269740605272,2.3633704291017,1.55210578223795,0.966182642624386,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0,0.476981248610684,0.571994910780128,0,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0.275118041940067,0.417989933073621,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,0,0.446498641420399,0.673588117878509,0.112611480483322,0,0,0.183201743930407,0,0,0,1.49091585508596,0.759783069987479,1.58891016975863,2.86836620748814,0.354668382198357,0.560677600142307,1.06748995729705,0,0.622422070799533,0.942974704487816,0.326923806226917,0.605429710579726,0.576175924479999,0.468642863667593,0.312160076830321,0.570471821544449,0.448346041655403,0.352303495931295,0.323745888736263,0.842704840213491,0.408308342509787,0.737005903870608,0.206651562351531,0,0.741800787835671,1.82032272387605,0.718618141816238,0.336672227908132,0.375355559615893,2.21651292387346,1.31693286264251,0.919463387397059,0.300476117813194,0.226864366320042,1.25572744982203,0.85422955527427,0,0.300091096084402,0.103052529238439,1.28820270022815,0.18611685633159,0.843881661206331,0.584622030967192,1.7670364197088,0.552299391853796,0.80823028409406,0.355009592516614,0.201504196455281,0.67824236924195,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,3.12899064659632,1.28648187638577,0,1.39310378409594,3.60939740834793,2.12952240071719,2.19160097101532,3.37415441836875,1.98529150918309,2.83243277320128,2.60997681022206,2.83145747136345,2.5508790466295,1.53898862778556,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0.343135620597051,0.329250856225877,0,0.402115889646523,0.185176890317059,0,0,0,0.115930404975077,0.234817388471643,0,0,0.761016608938393,0,0,0.246217006087397,0.468008530278475,0.743155811443641,0.93733833986777,0.671928512795438,0.141775097242386,0.626909658919938,0.871901815541886,0.383382679165211,1.47798971368783,1.23267807618516,0.207328115540772,0.288239906833923,0.25248486685276,0.126995788584338,0,1.17217447210047,0,0.102827492703324,0.901029173531752,0,0.224262168690721,0,0.2933531432838,0.775630294546667,0,0,0.797814349754612,1.04007436911366,0.257207374262142,1.41849132023278,1.3321108950805,0,0,0,0,0.355391948742546,0,0.301439377059586,1.74306691720059,1.09970290300263,1.2162378064119,2.00902836572851,0,0.479249710983165,1.14861935834114,0,0.579125226670317,0.410952645100767,0.358121926479791,2.01753259188349,2.1673383622212,3.66566877261179,3.08023287071396,0.508189248444927,2.60279707715243,0,0,1.27587750330633,0,0,0,0,0.500170521059677,0,1.24782516918484,1.42743191037729,0.946214490203608,0.468565659970853,0.300946099727719,0,2.0694614258501,0,0.737476674166813,0.955719759148911,0,0,1.03384013061444,0.862856803274467,0.960548020230999,0.303127571446259,0,0.604780586659361,1.48864684691266,1.53461973288062,0.561320188866147,0.896974044789907,0.511707249066704,0.965123526861645,0,0.771048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| |||
|short_description=p2@CDKN2B-AS | |||
}} |
Latest revision as of 23:24, 16 September 2015
Short description: | p2@CDKN2B-AS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDKN2B-AS_5end |
Coexpression cluster: | NA |
Association with transcript: | 269bp_to_ENST00000428597, NR_003529, uc003zpm.2, uc010miw.1, uc010mix.1_5end |
EntrezGene: | CDKN2B-AS |
HGNC: | 34341 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.30e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.30e-24 | 42 |
defensive cell | 6.26e-22 | 48 |
phagocyte | 6.26e-22 | 48 |
hematopoietic lineage restricted progenitor cell | 6.47e-21 | 120 |
leukocyte | 1.95e-19 | 136 |
hematopoietic oligopotent progenitor cell | 5.52e-19 | 161 |
hematopoietic multipotent progenitor cell | 5.52e-19 | 161 |
nongranular leukocyte | 9.16e-19 | 115 |
myeloid lineage restricted progenitor cell | 7.71e-18 | 66 |
hematopoietic stem cell | 9.88e-18 | 168 |
macrophage dendritic cell progenitor | 4.08e-17 | 61 |
granulocyte monocyte progenitor cell | 4.60e-17 | 67 |
monopoietic cell | 6.73e-17 | 59 |
monocyte | 6.73e-17 | 59 |
monoblast | 6.73e-17 | 59 |
promonocyte | 6.73e-17 | 59 |
hematopoietic cell | 3.79e-16 | 177 |
myeloid leukocyte | 4.10e-16 | 72 |
myeloid cell | 6.07e-15 | 108 |
common myeloid progenitor | 6.07e-15 | 108 |
intermediate monocyte | 1.29e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.29e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.04e-18 | 76 |
bone element | 1.43e-17 | 82 |
immune system | 1.28e-14 | 93 |
skeletal element | 1.32e-14 | 90 |
skeletal system | 9.34e-14 | 100 |
hematopoietic system | 1.75e-13 | 98 |
blood island | 1.75e-13 | 98 |
hemolymphoid system | 1.59e-11 | 108 |
larynx | 2.40e-09 | 9 |
connective tissue | 1.41e-07 | 371 |
upper respiratory tract | 1.68e-07 | 19 |
musculoskeletal system | 6.15e-07 | 167 |