FFCP PHASE1:Hg19::chr9:20622444..20622468,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4300 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7136 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_ENST00000475957_5end | |||
|cluster_id=chr9:20622444..20622468,- | |||
|coexpression_cluster_id=C4812 | |||
|description=CAGE_peak_2_at_MLLT3_5end | |||
|id=chr9:20622444..20622468,- | |||
|ontology_enrichment_celltype=CL:0000838!9.89e-12!52;CL:0000542!4.09e-11!53;CL:0000051!4.09e-11!53;CL:0000791!3.15e-10!18;CL:0000789!3.15e-10!18;CL:0002420!3.15e-10!18;CL:0002419!3.15e-10!18;CL:0000790!3.15e-10!18;CL:0000084!6.01e-10!25;CL:0000827!6.01e-10!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.53e-10;18!CL:0000789;1.53e-10;18!CL:0002419;1.53e-10;18!CL:0000084;5.06e-10;25!CL:0000625;7.67e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.67e-12,52;CL:0000542,4.23e-11,53;CL:0000051,4.23e-11,53;CL:0000791,1.91e-10,18;CL:0000789,1.91e-10,18;CL:0002420,1.91e-10,18;CL:0002419,1.91e-10,18;CL:0000790,1.91e-10,18;CL:0000084,6.24e-10,25;CL:0000827,6.24e-10,25;CL:0000625,7.84e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.53e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.44e-13!115;UBERON:0001049!1.90e-12!57;UBERON:0005068!1.90e-12!57;UBERON:0006241!1.90e-12!57;UBERON:0007135!1.90e-12!57;UBERON:0002616!1.50e-11!59;UBERON:0003080!2.37e-11!42;UBERON:0002780!4.09e-11!41;UBERON:0001890!4.09e-11!41;UBERON:0006240!4.09e-11!41;UBERON:0001017!6.09e-10!82;UBERON:0002020!4.98e-09!34;UBERON:0003528!4.98e-09!34;UBERON:0005743!5.54e-09!86;UBERON:0001893!8.17e-09!34;UBERON:0002791!1.09e-08!33;UBERON:0000955!1.19e-08!69;UBERON:0006238!1.19e-08!69;UBERON:0000073!2.19e-08!94;UBERON:0001016!2.19e-08!94;UBERON:0001869!3.72e-08!32;UBERON:0000153!7.48e-08!129;UBERON:0007811!7.48e-08!129;UBERON:0002346!1.52e-07!90;UBERON:0000924!8.66e-07!173;UBERON:0006601!8.66e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.04e-08;41!UBERON:0001890;2.04e-08;41!UBERON:0002791;1.18e-07;32!UBERON:0000073;1.30e-07;53!UBERON:0002616;1.30e-07;53!UBERON:0003528;1.47e-07;34!UBERON:0002020;1.47e-07;34!UBERON:0001869;2.92e-07;32!UBERON:0001893;3.69e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.56e-13,114;UBERON:0001049,2.59e-12,56;UBERON:0005068,2.59e-12,56;UBERON:0006241,2.59e-12,56;UBERON:0007135,2.59e-12,56;UBERON:0000073,9.74e-12,53;UBERON:0002616,9.74e-12,53;UBERON:0011216,3.75e-11,223;UBERON:0002780,4.07e-11,41;UBERON:0001890,4.07e-11,41;UBERON:0003080,4.07e-11,41;UBERON:0006240,4.07e-11,41;UBERON:0001017,4.83e-10,81;UBERON:0001016,1.62e-09,89;UBERON:0003528,5.48e-09,34;UBERON:0002020,5.48e-09,34;UBERON:0001893,9.04e-09,34;UBERON:0000955,9.94e-09,68;UBERON:0006238,9.94e-09,68;UBERON:0002791,2.01e-08,32;UBERON:0002346,2.37e-08,86;UBERON:0001869,4.24e-08,32;UBERON:0003075,4.36e-07,82;UBERON:0007284,4.36e-07,82;UBERON:0004121,6.06e-07,171;UBERON:0000924,6.06e-07,171;UBERON:0006601,6.06e-07,171 | |||
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| |||
|short_description=p2@MLLT3 | |||
}} |
Latest revision as of 22:03, 16 September 2015
Short description: | p2@MLLT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MLLT3_5end |
Coexpression cluster: | C4812_occipital_parietal_rectal_duodenum_temporal_neuroectodermal_CD4 |
Association with transcript: | -5bp_to_ENST00000475957_5end |
EntrezGene: | MLLT3 |
HGNC: | 7136 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.67e-12 | 52 |
lymphocyte | 4.23e-11 | 53 |
common lymphoid progenitor | 4.23e-11 | 53 |
mature alpha-beta T cell | 1.91e-10 | 18 |
alpha-beta T cell | 1.91e-10 | 18 |
immature T cell | 1.91e-10 | 18 |
mature T cell | 1.91e-10 | 18 |
immature alpha-beta T cell | 1.91e-10 | 18 |
T cell | 6.24e-10 | 25 |
pro-T cell | 6.24e-10 | 25 |
CD8-positive, alpha-beta T cell | 7.84e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.56e-13 | 114 |
neural tube | 2.59e-12 | 56 |
neural rod | 2.59e-12 | 56 |
future spinal cord | 2.59e-12 | 56 |
neural keel | 2.59e-12 | 56 |
regional part of nervous system | 9.74e-12 | 53 |
regional part of brain | 9.74e-12 | 53 |
organ system subdivision | 3.75e-11 | 223 |
regional part of forebrain | 4.07e-11 | 41 |
forebrain | 4.07e-11 | 41 |
anterior neural tube | 4.07e-11 | 41 |
future forebrain | 4.07e-11 | 41 |
central nervous system | 4.83e-10 | 81 |
nervous system | 1.62e-09 | 89 |
brain grey matter | 5.48e-09 | 34 |
gray matter | 5.48e-09 | 34 |
telencephalon | 9.04e-09 | 34 |
brain | 9.94e-09 | 68 |
future brain | 9.94e-09 | 68 |
regional part of telencephalon | 2.01e-08 | 32 |
neurectoderm | 2.37e-08 | 86 |
cerebral hemisphere | 4.24e-08 | 32 |
neural plate | 4.36e-07 | 82 |
presumptive neural plate | 4.36e-07 | 82 |
ectoderm-derived structure | 6.06e-07 | 171 |
ectoderm | 6.06e-07 | 171 |
presumptive ectoderm | 6.06e-07 | 171 |