FFCP PHASE1:Hg19::chr9:2015275..2015287,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6595 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11098 | |||
|TSSclassifier=strong | |||
|UniProt=P51531,Q56A76,Q8N9Q1 | |||
|association_with_transcript=-54bp_to_ENST00000349721,ENST00000357248,NM_003070,NM_139045,uc003zhc.2,uc003zhd.2,uc010mha.2_5end | |||
|cluster_id=chr9:2015275..2015287,+ | |||
|description=CAGE_peak_8_at_SMARCA2_5end | |||
|id=chr9:2015275..2015287,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.76e-13!52;CL:0000542!2.17e-13!53;CL:0000051!2.17e-13!53;CL:0000945!1.92e-10!24;CL:0000826!1.92e-10!24;CL:0000236!1.71e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.74e-13;24!CL:0000236;5.67e-09;13!CL:0000542;2.07e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.01e-14,52;CL:0000542,3.66e-14,53;CL:0000051,3.66e-14,53;CL:0000945,1.29e-13,24;CL:0000826,1.29e-13,24;CL:0000236,1.28e-09,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.07e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-33!115;UBERON:0001049!2.18e-23!57;UBERON:0005068!2.18e-23!57;UBERON:0006241!2.18e-23!57;UBERON:0007135!2.18e-23!57;UBERON:0002616!1.16e-21!59;UBERON:0000955!2.86e-20!69;UBERON:0006238!2.86e-20!69;UBERON:0005743!6.03e-19!86;UBERON:0001017!1.50e-18!82;UBERON:0003080!1.68e-16!42;UBERON:0000073!1.95e-16!94;UBERON:0001016!1.95e-16!94;UBERON:0002780!2.41e-16!41;UBERON:0001890!2.41e-16!41;UBERON:0006240!2.41e-16!41;UBERON:0003075!2.96e-15!86;UBERON:0007284!2.96e-15!86;UBERON:0002346!2.48e-14!90;UBERON:0001893!7.43e-14!34;UBERON:0002020!8.75e-14!34;UBERON:0003528!8.75e-14!34;UBERON:0002791!2.48e-13!33;UBERON:0001869!9.58e-13!32;UBERON:0000153!2.91e-12!129;UBERON:0007811!2.91e-12!129;UBERON:0003056!2.19e-11!61;UBERON:0000033!7.90e-11!123;UBERON:0000956!2.37e-09!25;UBERON:0000203!2.37e-09!25;UBERON:0001950!4.09e-09!20;UBERON:0002619!1.01e-08!22;UBERON:0003076!3.71e-08!15;UBERON:0003057!3.71e-08!15;UBERON:0004121!1.57e-07!169;UBERON:0000924!3.16e-07!173;UBERON:0006601!3.16e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.05e-16;34!UBERON:0003528;9.27e-16;34!UBERON:0002020;9.27e-16;34!UBERON:0002791;9.69e-16;32!UBERON:0001869;1.01e-15;32!UBERON:0002780;2.04e-15;41!UBERON:0001890;2.04e-15;41!UBERON:0000073;2.53e-15;53!UBERON:0002616;2.53e-15;53!UBERON:0000956;1.77e-12;25!UBERON:0000203;1.77e-12;25!UBERON:0001950;1.41e-11;20!UBERON:0002619;1.51e-11;22!UBERON:0000955;1.63e-10;68!UBERON:0007023;2.84e-10;114!UBERON:0001017;1.30e-09;75!UBERON:0001016;3.38e-08;83!UBERON:0000125;7.93e-08;9!UBERON:0002308;7.93e-08;9!UBERON:0002420;2.48e-07;9!UBERON:0007245;2.48e-07;9!UBERON:0010009;2.48e-07;9!UBERON:0010011;2.48e-07;9!UBERON:0000454;2.48e-07;9!UBERON:0004733;4.30e-07;12!UBERON:0002028;4.30e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.94e-38,114;UBERON:0001049,1.72e-28,56;UBERON:0005068,1.72e-28,56;UBERON:0006241,1.72e-28,56;UBERON:0007135,1.72e-28,56;UBERON:0000073,2.99e-26,53;UBERON:0002616,2.99e-26,53;UBERON:0000955,1.97e-22,68;UBERON:0006238,1.97e-22,68;UBERON:0001017,1.39e-21,81;UBERON:0002780,2.10e-20,41;UBERON:0001890,2.10e-20,41;UBERON:0003080,2.10e-20,41;UBERON:0006240,2.10e-20,41;UBERON:0001016,8.92e-19,89;UBERON:0001893,2.60e-18,34;UBERON:0003528,3.24e-18,34;UBERON:0002020,3.24e-18,34;UBERON:0003075,1.55e-17,82;UBERON:0007284,1.55e-17,82;UBERON:0002791,7.69e-17,32;UBERON:0001869,8.41e-17,32;UBERON:0002346,9.34e-16,86;UBERON:0010371,2.85e-12,104;UBERON:0000956,3.42e-12,25;UBERON:0000203,3.42e-12,25;UBERON:0001950,2.31e-11,20;UBERON:0002619,2.43e-11,22;UBERON:0003056,2.82e-11,61;UBERON:0010314,5.72e-10,132;UBERON:0003076,3.08e-09,15;UBERON:0003057,3.08e-09,15;UBERON:0011216,5.70e-08,223;UBERON:0000125,9.75e-08,9;UBERON:0002308,9.75e-08,9;UBERON:0002420,1.50e-07,9;UBERON:0007245,1.50e-07,9;UBERON:0010009,1.50e-07,9;UBERON:0010011,1.50e-07,9;UBERON:0000454,1.50e-07,9;UBERON:0004733,4.29e-07,12;UBERON:0002028,4.29e-07,12;UBERON:0007277,4.29e-07,12;UBERON:0004121,6.58e-07,171;UBERON:0000924,6.58e-07,171;UBERON:0006601,6.58e-07,171 | |||
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| |||
|short_description=p8@SMARCA2 | |||
}} |
Latest revision as of 21:35, 16 September 2015
Short description: | p8@SMARCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SMARCA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_ENST00000349721, ENST00000357248, NM_003070, NM_139045, uc003zhc.2, uc003zhd.2, uc010mha.2_5end |
EntrezGene: | SMARCA2 |
HGNC: | 11098 |
UniProt: | P51531Q56A76Q8N9Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.01e-14 | 52 |
lymphocyte | 3.66e-14 | 53 |
common lymphoid progenitor | 3.66e-14 | 53 |
lymphocyte of B lineage | 1.29e-13 | 24 |
pro-B cell | 1.29e-13 | 24 |
B cell | 1.28e-09 | 14 |