FFCP PHASE1:Mm9::chr6:103460829..103460861,+: Difference between revisions
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{{FFCP|EntrezGene=12661|HGNC=|MCL_coexpression_id=1203|UniProt=E9QMU6,A2RRK1,E9QL95,P70232|association_with_transcript=-8bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end|description=CAGE_peak_7_at_Chl1_5end|id=chr6:103460829..103460861,+|ontology_enrichment_celltype=CL:0000540!1.62e-22!33;CL:0000047!1.62e-22!33;CL:0000031!1.62e-22!33;CL:0000404!1.62e-22!33;CL:0000221!1.84e-21!44;CL:0000133!1.84e-21!44;CL:0002319!3.40e-21!43;CL:0000117!1.71e-16!23;CL:0000337!1.71e-16!23;CL:0000393!2.38e-16!39;CL:0000211!2.38e-16!39;CL:0000055!1.78e-15!50;CL:0000107!6.26e-07!9;CL:0002321!7.12e-07!70;CL:0000220!7.12e-07!70|ontology_enrichment_celltype_v019_2=CL:0000540,1.22e-30,33;CL:0000047,1.22e-30,33;CL:0000031,1.22e-30,33;CL:0000404,1.22e-30,33;CL:0000221,2.20e-26,44;CL:0000133,2.20e-26,44;CL:0002319,5.28e-26,43;CL:0000393,6.12e-24,39;CL:0000211,6.12e-24,39;CL:0000117,2.88e-22,23;CL:0000337,2.88e-22,23;CL:0002321,1.16e-11,70;CL:0000107,5.19e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.05e-35!75;UBERON:0001016!8.05e-35!75;UBERON:0001017!1.30e-33!73;UBERON:0005743!1.30e-33!73;UBERON:0004121!5.34e-30!102;UBERON:0000924!5.34e-30!102;UBERON:0006601!5.34e-30!102;UBERON:0001049!1.93e-22!52;UBERON:0005068!1.93e-22!52;UBERON:0006241!1.93e-22!52;UBERON:0007135!1.93e-22!52;UBERON:0002346!5.39e-22!71;UBERON:0003075!5.39e-22!71;UBERON:0007284!5.39e-22!71;UBERON:0002020!1.85e-21!34;UBERON:0000955!2.90e-20!50;UBERON:0006238!2.90e-20!50;UBERON:0002616!5.55e-20!49;UBERON:0000033!8.62e-19!63;UBERON:0002791!1.26e-17!29;UBERON:0003528!1.26e-17!29;UBERON:0001893!1.26e-17!29;UBERON:0003080!3.84e-17!40;UBERON:0002780!1.61e-16!39;UBERON:0001890!1.61e-16!39;UBERON:0006240!1.61e-16!39;UBERON:0003056!1.62e-15!49;UBERON:0000956!1.18e-12!21;UBERON:0001869!1.18e-12!21;UBERON:0000203!1.18e-12!21;UBERON:0002619!4.08e-10!17;UBERON:0007811!5.29e-10!86;UBERON:0000153!5.90e-08!94;UBERON:0000010!8.34e-08!11;UBERON:0002021!5.19e-07!10;UBERON:0000411!5.19e-07!10;UBERON:0001950!5.19e-07!10;UBERON:0002410!6.26e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.70e-40,75;UBERON:0001017,3.12e-38,73;UBERON:0004121,6.65e-29,95;UBERON:0000924,6.65e-29,95;UBERON:0006601,6.65e-29,95;UBERON:0002020,6.17e-27,34;UBERON:0000073,1.85e-25,54;UBERON:0001049,1.07e-23,52;UBERON:0005068,1.07e-23,52;UBERON:0006241,1.07e-23,52;UBERON:0007135,1.07e-23,52;UBERON:0003528,1.07e-21,29;UBERON:0002791,1.07e-21,29;UBERON:0001893,1.07e-21,29;UBERON:0002346,3.21e-21,64;UBERON:0003075,3.21e-21,64;UBERON:0007284,3.21e-21,64;UBERON:0000955,1.60e-18,47;UBERON:0006238,1.60e-18,47;UBERON:0010371,2.17e-18,73;UBERON:0002616,3.86e-18,46;UBERON:0003080,4.53e-17,40;UBERON:0002780,2.81e-16,39;UBERON:0001890,2.81e-16,39;UBERON:0006240,2.81e-16,39;UBERON:0000956,6.95e-15,21;UBERON:0001869,6.95e-15,21;UBERON:0000203,6.95e-15,21;UBERON:0003056,8.45e-13,49;UBERON:0010314,1.70e-11,92;UBERON:0002619,1.95e-11,17;UBERON:0000010,3.21e-10,11;UBERON:0002021,4.00e-09,10;UBERON:0000411,4.00e-09,10;UBERON:0001950,4.00e-09,10;UBERON:0002410,5.19e-09,9;UBERON:0002420,5.22e-08,8;UBERON:0007245,5.22e-08,8;UBERON:0010009,5.22e-08,8;UBERON:0010011,5.22e-08,8;UBERON:0000454,5.22e-08,8;UBERON:0003076,2.81e-07,12;UBERON:0003057,2.81e-07,12;UBERON:0002240,3.25e-07,6;UBERON:0005174,3.25e-07,6;UBERON:0001137,3.25e-07,6|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,13.5552028775931,11.6378015439847,10.775133859605,0,0,0,0,0,1.49800055259202,1.15265491596466,10.3689612308478,3.91517221161903,7.78202357000113,7.14127461009509,5.07997644188711,6.85948475603743,4.2172007248024,6.43453150627015,4.40463523997555,6.12899222808901,8.90917892886212,10.1552441552249,11.4359554503012,10.939180781692,3.35019598801657,4.50210088025344,7.63991238884051,15.3206864446307,15.8032565687004,15.2847545576746,1.06016670666458,13.9807386197553,0,0,0,0,0,0,0.140444420131752,0,0,0,1.83096445709685,0,0,0,0,0,0,0.5709193985953,0.776813650941515,0.445326417194474,0,0.913396434936424,0.691846491768175,0,0.470354828542819,0.376999773989026,0,0,0,0,0.220841518460394,0,0,2.92780797011547,3.77004072264219,0.255457055208591,0,0,0,6.14141621559773,2.74500361691176,11.4345460422707,8.51739168942155,7.41574826257959,4.1557608911912,5.84068547043927,0,0,0,0.210441855886474,0,0,0.540186389416048,1.20563854268572,0.476255494059295,0,0.655912071918102,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,12.4071069652835,21.3012547625119,0,0.264450566663544,0.213288250535234,0.696710015581316,0.257734922644187,0.403367049246685,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12661 | |||
|HGNC= | |||
|MCL_coexpression_id=1203 | |||
|TSSclassifier=NA | |||
|UniProt=E9QMU6,A2RRK1,E9QL95,P70232 | |||
|association_with_transcript=-8bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end | |||
|cluster_id=chr6:103460829..103460861,+ | |||
|description=CAGE_peak_7_at_Chl1_5end | |||
|id=chr6:103460829..103460861,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.62e-22!33;CL:0000047!1.62e-22!33;CL:0000031!1.62e-22!33;CL:0000404!1.62e-22!33;CL:0000221!1.84e-21!44;CL:0000133!1.84e-21!44;CL:0002319!3.40e-21!43;CL:0000117!1.71e-16!23;CL:0000337!1.71e-16!23;CL:0000393!2.38e-16!39;CL:0000211!2.38e-16!39;CL:0000055!1.78e-15!50;CL:0000107!6.26e-07!9;CL:0002321!7.12e-07!70;CL:0000220!7.12e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.22e-30,33;CL:0000047,1.22e-30,33;CL:0000031,1.22e-30,33;CL:0000404,1.22e-30,33;CL:0000221,2.20e-26,44;CL:0000133,2.20e-26,44;CL:0002319,5.28e-26,43;CL:0000393,6.12e-24,39;CL:0000211,6.12e-24,39;CL:0000117,2.88e-22,23;CL:0000337,2.88e-22,23;CL:0002321,1.16e-11,70;CL:0000107,5.19e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.05e-35!75;UBERON:0001016!8.05e-35!75;UBERON:0001017!1.30e-33!73;UBERON:0005743!1.30e-33!73;UBERON:0004121!5.34e-30!102;UBERON:0000924!5.34e-30!102;UBERON:0006601!5.34e-30!102;UBERON:0001049!1.93e-22!52;UBERON:0005068!1.93e-22!52;UBERON:0006241!1.93e-22!52;UBERON:0007135!1.93e-22!52;UBERON:0002346!5.39e-22!71;UBERON:0003075!5.39e-22!71;UBERON:0007284!5.39e-22!71;UBERON:0002020!1.85e-21!34;UBERON:0000955!2.90e-20!50;UBERON:0006238!2.90e-20!50;UBERON:0002616!5.55e-20!49;UBERON:0000033!8.62e-19!63;UBERON:0002791!1.26e-17!29;UBERON:0003528!1.26e-17!29;UBERON:0001893!1.26e-17!29;UBERON:0003080!3.84e-17!40;UBERON:0002780!1.61e-16!39;UBERON:0001890!1.61e-16!39;UBERON:0006240!1.61e-16!39;UBERON:0003056!1.62e-15!49;UBERON:0000956!1.18e-12!21;UBERON:0001869!1.18e-12!21;UBERON:0000203!1.18e-12!21;UBERON:0002619!4.08e-10!17;UBERON:0007811!5.29e-10!86;UBERON:0000153!5.90e-08!94;UBERON:0000010!8.34e-08!11;UBERON:0002021!5.19e-07!10;UBERON:0000411!5.19e-07!10;UBERON:0001950!5.19e-07!10;UBERON:0002410!6.26e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.70e-40,75;UBERON:0001017,3.12e-38,73;UBERON:0004121,6.65e-29,95;UBERON:0000924,6.65e-29,95;UBERON:0006601,6.65e-29,95;UBERON:0002020,6.17e-27,34;UBERON:0000073,1.85e-25,54;UBERON:0001049,1.07e-23,52;UBERON:0005068,1.07e-23,52;UBERON:0006241,1.07e-23,52;UBERON:0007135,1.07e-23,52;UBERON:0003528,1.07e-21,29;UBERON:0002791,1.07e-21,29;UBERON:0001893,1.07e-21,29;UBERON:0002346,3.21e-21,64;UBERON:0003075,3.21e-21,64;UBERON:0007284,3.21e-21,64;UBERON:0000955,1.60e-18,47;UBERON:0006238,1.60e-18,47;UBERON:0010371,2.17e-18,73;UBERON:0002616,3.86e-18,46;UBERON:0003080,4.53e-17,40;UBERON:0002780,2.81e-16,39;UBERON:0001890,2.81e-16,39;UBERON:0006240,2.81e-16,39;UBERON:0000956,6.95e-15,21;UBERON:0001869,6.95e-15,21;UBERON:0000203,6.95e-15,21;UBERON:0003056,8.45e-13,49;UBERON:0010314,1.70e-11,92;UBERON:0002619,1.95e-11,17;UBERON:0000010,3.21e-10,11;UBERON:0002021,4.00e-09,10;UBERON:0000411,4.00e-09,10;UBERON:0001950,4.00e-09,10;UBERON:0002410,5.19e-09,9;UBERON:0002420,5.22e-08,8;UBERON:0007245,5.22e-08,8;UBERON:0010009,5.22e-08,8;UBERON:0010011,5.22e-08,8;UBERON:0000454,5.22e-08,8;UBERON:0003076,2.81e-07,12;UBERON:0003057,2.81e-07,12;UBERON:0002240,3.25e-07,6;UBERON:0005174,3.25e-07,6;UBERON:0001137,3.25e-07,6 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,13.5552028775931,11.6378015439847,10.775133859605,0,0,0,0,0,1.49800055259202,1.15265491596466,10.3689612308478,3.91517221161903,7.78202357000113,7.14127461009509,5.07997644188711,6.85948475603743,4.2172007248024,6.43453150627015,4.40463523997555,6.12899222808901,8.90917892886212,10.1552441552249,11.4359554503012,10.939180781692,3.35019598801657,4.50210088025344,7.63991238884051,15.3206864446307,15.8032565687004,15.2847545576746,1.06016670666458,13.9807386197553,0,0,0,0,0,0,0.140444420131752,0,0,0,1.83096445709685,0,0,0,0,0,0,0.5709193985953,0.776813650941515,0.445326417194474,0,0.913396434936424,0.691846491768175,0,0.470354828542819,0.376999773989026,0,0,0,0,0.220841518460394,0,0,2.92780797011547,3.77004072264219,0.255457055208591,0,0,0,6.14141621559773,2.74500361691176,11.4345460422707,8.51739168942155,7.41574826257959,4.1557608911912,5.84068547043927,0,0,0,0.210441855886474,0,0,0.540186389416048,1.20563854268572,0.476255494059295,0,0.655912071918102,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,12.4071069652835,21.3012547625119,0,0.264450566663544,0.213288250535234,0.696710015581316,0.257734922644187,0.403367049246685,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,4.49541651965817,3.5163505977661,0,0.252470927204373,5.36363973007636,4.29482618726302,6.67812532971677,7.40803273652911,9.13474563737816,11.0399847007645,5.26253912177363,4.67609372658099,8.30104333687699,1.60660658210904,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0.727067458955011,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.891844088010353,0.658196082408484,0.608929898229199,0,0,0.661585194164886,0.65954501176592,0.161464426695906,0.301564624640779,0.358117032009409,0,0.291480836629851,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,1.29606408986162,0.418176592028937,0.436725127492355,0.674321731924103,1.07449492442937,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0.38983152295901,0.288635524920988,0.116876902181569,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,0,0.428736758158132,0,9.03602948187307,6.90487854760765,8.02053718815155,7.04598047609119,4.11049511862385,6.7985450765073,6.07520250208625,3.60256962579376,3.17199686288943,5.69536342927002,0.830298780673413,3.99024873401031,2.04880326904961,1.94485373654635,1.25767897576789,2.94149613520023,3.33370091702423,3.91466608753899,2.24643446714271,3.79045817645696,4.05566879824384,1.88626341386076,3.183811253976,3.39333307745807,2.5845961030026,2.85776214769844,3.01299247456624,4.05109362973781,3.29668720642645,4.41596760403192,1.37147700954166,2.8396128985494,3.57654284920981,3.34296758254356,2.54095327121393,2.62305284464197,2.74391959309159,3.41990624869196,3.12349461845482,5.05028044491965,3.2031454893527,2.06859412988683,4.09231043169689,2.94379998253335,2.50778594275484,3.49734809113124,2.33931608445408,2.79332370262788,0.765153328275374,0.220591419119515,0.231867835620421 | |||
|short_description=p7@Chl1 | |||
}} |
Latest revision as of 10:27, 26 September 2015
Short description: | p7@Chl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Chl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1203 |
Association with transcript: | -8bp_to_ENSMUST00000032163, ENSMUST00000066905, ENSMUST00000089225, NM_007697, uc009dcj.1, uc009dck.1_5end |
EntrezGene: | Chl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.22e-30 | 33 |
neuronal stem cell | 1.22e-30 | 33 |
neuroblast | 1.22e-30 | 33 |
electrically signaling cell | 1.22e-30 | 33 |
ectodermal cell | 2.20e-26 | 44 |
neurectodermal cell | 2.20e-26 | 44 |
neural cell | 5.28e-26 | 43 |
electrically responsive cell | 6.12e-24 | 39 |
electrically active cell | 6.12e-24 | 39 |
CNS neuron (sensu Vertebrata) | 2.88e-22 | 23 |
neuroblast (sensu Vertebrata) | 2.88e-22 | 23 |
embryonic cell | 1.16e-11 | 70 |
autonomic neuron | 5.19e-09 | 9 |