FFCP PHASE1:Hg19::chr9:140351903..140351920,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26012 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29843 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=68bp_to_ENST00000339554_5end | |||
|cluster_id=chr9:140351903..140351920,- | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_6_at_NELF_5end | |||
|id=chr9:140351903..140351920,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002589;1.13e-21;2!CL:0000515;8.66e-15;3!CL:0000056;2.49e-11;4!CL:0000680;7.63e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,1.26e-21,2;CL:0000515,2.37e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.01e-11;1!CL:0000515;2.49e-11;4!UBERON:0006965;9.96e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.93e-12;1!DOID:1357;2.93e-12;1!DOID:1325;4.01e-07;7!DOID:3904;4.01e-07;7!DOID:3910;8.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.93e-12,1;DOID:1357,2.93e-12,1;DOID:1325,3.96e-07,7;DOID:3904,3.96e-07,7;DOID:3910,8.93e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.90e-20!57;UBERON:0005068!1.90e-20!57;UBERON:0006241!1.90e-20!57;UBERON:0007135!1.90e-20!57;UBERON:0002616!2.74e-19!59;UBERON:0003075!1.60e-16!86;UBERON:0007284!1.60e-16!86;UBERON:0002780!3.61e-16!41;UBERON:0001890!3.61e-16!41;UBERON:0006240!3.61e-16!41;UBERON:0003080!1.44e-15!42;UBERON:0000955!2.29e-15!69;UBERON:0006238!2.29e-15!69;UBERON:0002346!3.78e-15!90;UBERON:0001893!1.04e-14!34;UBERON:0002791!5.25e-14!33;UBERON:0001017!1.65e-13!82;UBERON:0002020!4.40e-13!34;UBERON:0003528!4.40e-13!34;UBERON:0001869!4.84e-13!32;UBERON:0000033!2.25e-12!123;UBERON:0005743!2.62e-12!86;UBERON:0000153!3.28e-12!129;UBERON:0007811!3.28e-12!129;UBERON:0002619!2.73e-11!22;UBERON:0001950!5.38e-11!20;UBERON:0000073!1.11e-10!94;UBERON:0001016!1.11e-10!94;UBERON:0003056!1.48e-10!61;UBERON:0000956!1.52e-10!25;UBERON:0000203!1.52e-10!25;UBERON:0007023!7.04e-10!115;UBERON:0000025!6.27e-09!194;UBERON:0004121!1.39e-08!169;UBERON:0004111!3.75e-08!241;UBERON:0000924!4.84e-08!173;UBERON:0006601!4.84e-08!173;UBERON:0000477!6.37e-08!286;UBERON:0000481!1.57e-07!347;UBERON:0000475!2.07e-07!365;UBERON:0000483!9.06e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;1.13e-21;2!UBERON:0007204;1.13e-21;2!UBERON:0001764;2.93e-12;1!UBERON:0001825;2.93e-12;1!UBERON:0002146;4.78e-12;1!UBERON:0005623;4.78e-12;1!UBERON:0001831;1.01e-11;1!UBERON:0001567;1.01e-11;1!UBERON:0004573;2.54e-07;33!UBERON:0004571;2.54e-07;33!UBERON:0004903;8.93e-07;2!UBERON:0002173;8.93e-07;2!UBERON:0002186;8.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,1.26e-21,2;UBERON:0007204,1.26e-21,2;UBERON:0001764,2.93e-12,1;UBERON:0001825,2.93e-12,1;UBERON:0002146,5.05e-12,1;UBERON:0005623,5.05e-12,1;UBERON:0001831,7.76e-12,1;UBERON:0001567,7.76e-12,1;UBERON:0008801,7.76e-12,1;UBERON:0004573,6.46e-08,33;UBERON:0004571,6.46e-08,33;UBERON:0000025,3.00e-07,192;UBERON:0004903,8.93e-07,2;UBERON:0002173,8.93e-07,2;UBERON:0002186,8.93e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0.522371256399677,0,0.697801167972428,0,0,0,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0.246242116153576,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,0,0,0,0,1.59259437334337,1.43833425785268,0.179060963239896,0.112085143993527,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0.587403472388222,0,0.206768026122887,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0.178064071293475,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,1.48259375283136,1.43124886741991,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0,0,0,3.17020642346017,0,0,0,0,0,0,0,0,1.99031692572366,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0,0,2.46174797895425,0,0,0,0,0,0,0,37.5059713784465,0,0.296964680832639,0,0,0.281338832821026,0.222617410045812,0,0.422250816255987,5.57894367102995,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0,0,0,0,0,0,1.77148277162768,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.471807930864739,0,0.702793337176017,0.182454789215666,0,0,0,0,0.30607276163049,0.126373159256976,0.150323419414493,0,0.664653872707185,0,0,0,0,0.554698692052555,0.173559738335131,0,0,0.52418000472609,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0.137041924646751,0,0.0633107959558787,0,0,0,0.19980960958213,0,0.343609788497747,0,0,0.372757606696298,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,2.29160424011684,0.717873024576814,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.329663433524666,0.0674035438541849,0,0,0,1.22583065500418,0,0.137539436597234,0,0,0,0.121499113316049,0.335434687599266,0.315222829196793,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,7.85270481251171,0,0.854183854313742,0.625954653532499,1.14681839138014,0.332787154610557,0.993542447062135,0,0,0.151649117541648,0,0.705797459094515,0,0,0.149254802886874,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,1.20008329398946,0,0,0,0,0.428883182749851,0.260994291965212,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0.303859956177382,0.691292180758654,0,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0,0.82046545696302,0.252071696221718,0.207471757392654,0.322951291263702,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0.781078098613847,0.413373593002368,0.126831620387814,0.546974809018219,1.64477330057155,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0,0.203909198930495,0.197318320688547,0.118193840883968,0,0,0.314231179832004,0,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0.102662806856247,0,0,0,0.994753875806841,0,3.72722070728568,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.475940431336403,0.872701380680755,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,1.65833887891756,0.103432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.179650404213174,0,0,0,0,0.201273793591026,0.641136984606466 | |||
|short_description=p6@NELF | |||
}} |
Latest revision as of 17:21, 16 September 2015
Short description: | p6@NELF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NELF_5end |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | 68bp_to_ENST00000339554_5end |
EntrezGene: | NELF |
HGNC: | 29843 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 1.26e-21 | 2 |
skeletal muscle myoblast | 2.37e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 1.26e-21 | 2 |
brachiocephalic vasculature | 1.26e-21 | 2 |
maxillary sinus | 2.93e-12 | 1 |
paranasal sinus | 2.93e-12 | 1 |
pulmonary valve | 5.05e-12 | 1 |
semi-lunar valve | 5.05e-12 | 1 |
parotid gland | 7.76e-12 | 1 |
cheek | 7.76e-12 | 1 |
parotid gland primordium | 7.76e-12 | 1 |
systemic artery | 6.46e-08 | 33 |
systemic arterial system | 6.46e-08 | 33 |
tube | 3.00e-07 | 192 |
bronchoalveolar duct junction | 8.93e-07 | 2 |
alveolar duct | 8.93e-07 | 2 |
bronchiole | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.93e-12 | 1 |
maxillary sinus cancer | 2.93e-12 | 1 |
bronchus cancer | 3.96e-07 | 7 |
bronchogenic carcinoma | 3.96e-07 | 7 |
lung adenocarcinoma | 8.93e-07 | 2 |