FFCP PHASE1:Hg19::chr9:139636423..139636431,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=414332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20892 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=24bp_to_ENST00000494294_5end | |||
|cluster_id=chr9:139636423..139636431,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_5_at_LCN10_5end | |||
|id=chr9:139636423..139636431,- | |||
|ontology_enrichment_celltype=CL:0000236!2.80e-15!14;CL:0000945!5.56e-11!24;CL:0000826!5.56e-11!24;CL:0002274!2.91e-09!5;CL:0000457!2.91e-09!5;CL:0002191!2.91e-09!5;CL:0000097!2.91e-09!5;CL:0000831!2.91e-09!5;CL:0002028!2.91e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.82e-40;5!CL:0000163;7.21e-23;9!CL:0000771;3.24e-12;2!CL:0000236;1.05e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.95e-40,5;CL:0002028,1.95e-40,5;CL:0000163,7.49e-23,9;CL:0000771,3.24e-12,2;CL:0000236,3.24e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0005062;9.63e-07;4!UBERON:0007284;9.63e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.83e-19!115;UBERON:0002950!5.26e-10!2;UBERON:0001891!5.26e-10!2;UBERON:0009616!5.26e-10!2;UBERON:0003978!6.01e-07!3;UBERON:0009751!6.01e-07!3;UBERON:0000946!6.01e-07!3;UBERON:0002523!6.01e-07!3;UBERON:0005983!6.01e-07!3;UBERON:0002165!6.01e-07!3;UBERON:0002062!6.01e-07!3;UBERON:0007280!6.01e-07!3;UBERON:0002106!8.55e-07!3;UBERON:0004854!8.55e-07!3;UBERON:0009034!8.55e-07!3;UBERON:0002095!8.55e-07!3;UBERON:0004782!8.55e-07!3;UBERON:0003281!8.55e-07!3;UBERON:0009664!8.55e-07!3;UBERON:0002296!8.55e-07!3;UBERON:0005602!8.55e-07!3;UBERON:0001179!8.55e-07!3;UBERON:0006293!8.55e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;1.49e-23;1!UBERON:0002135;5.13e-23;1!UBERON:0002133;3.24e-12;2!UBERON:0003978;1.40e-08;3!UBERON:0000946;1.40e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,1.34e-23,1;UBERON:0002135,6.40e-23,1;UBERON:0002133,3.62e-12,2;UBERON:0003978,1.51e-08,3;UBERON:0009751,1.51e-08,3;UBERON:0000946,1.51e-08,3;UBERON:0002523,1.51e-08,3;UBERON:0005983,1.51e-08,3;UBERON:0002165,1.51e-08,3;UBERON:0002062,1.51e-08,3;UBERON:0007280,1.51e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,2.66852776159066,0.426730222566507,0.800791974072025,0,0.661044872784862,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69526550203004,4.03535869567492,6.18587923789262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0.245148321753905,0,0,0,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.318235791390825,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.122241444182866,0,4.66029741929859,0.805095174364105,0 | |||
|short_description=p5@LCN10 | |||
}} |
Latest revision as of 13:00, 16 September 2015
Short description: | p5@LCN10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LCN10_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 24bp_to_ENST00000494294_5end |
EntrezGene: | LCN10 |
HGNC: | 20892 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.95e-40 | 5 |
basophil mast progenitor cell | 1.95e-40 | 5 |
endocrine cell | 7.49e-23 | 9 |
eosinophil | 3.24e-12 | 2 |
B cell | 3.24e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
vagina | 1.34e-23 | 1 |
mitral valve | 6.40e-23 | 1 |
atrioventricular valve | 3.62e-12 | 2 |
valve | 1.51e-08 | 3 |
cardiac mesenchyme | 1.51e-08 | 3 |
cardial valve | 1.51e-08 | 3 |
tunica intima | 1.51e-08 | 3 |
heart layer | 1.51e-08 | 3 |
endocardium | 1.51e-08 | 3 |
endocardial cushion | 1.51e-08 | 3 |
presumptive endocardium | 1.51e-08 | 3 |