FFCP PHASE1:Mm9::chr5:89363237..89363264,+: Difference between revisions
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{{FFCP|EntrezGene=54403|HGNC=|MCL_coexpression_id=311|UniProt=D3Z7I7|association_with_transcript=-292bp_to_ENSMUST00000144713_5end|description=CAGE_peak_6_at_Slc4a4_5end|id=chr5:89363237..89363264,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.41e-09!63;UBERON:0002021!1.15e-08!10;UBERON:0000411!1.15e-08!10;UBERON:0001950!1.15e-08!10;UBERON:0007100!2.91e-08!18;UBERON:0000948!2.91e-08!18;UBERON:0005498!2.91e-08!18;UBERON:0004140!2.91e-08!18;UBERON:0009881!2.91e-08!18;UBERON:0004141!2.91e-08!18;UBERON:0003084!2.91e-08!18;UBERON:0007005!2.91e-08!18;UBERON:0004139!2.91e-08!18;UBERON:0004291!2.91e-08!18;UBERON:0000955!7.87e-08!50;UBERON:0006238!7.87e-08!50;UBERON:0002616!3.07e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.30e-11,10;UBERON:0000411,1.30e-11,10;UBERON:0001950,1.30e-11,10;UBERON:0010314,1.74e-09,92;UBERON:0000073,1.75e-09,54;UBERON:0000955,2.32e-09,47;UBERON:0006238,2.32e-09,47;UBERON:0007100,6.64e-09,18;UBERON:0000948,6.64e-09,18;UBERON:0005498,6.64e-09,18;UBERON:0004140,6.64e-09,18;UBERON:0009881,6.64e-09,18;UBERON:0004141,6.64e-09,18;UBERON:0003084,6.64e-09,18;UBERON:0007005,6.64e-09,18;UBERON:0004139,6.64e-09,18;UBERON:0004291,6.64e-09,18;UBERON:0002616,1.82e-08,46;UBERON:0002619,2.92e-07,17;UBERON:0003528,3.08e-07,29;UBERON:0002791,3.08e-07,29;UBERON:0001893,3.08e-07,29;UBERON:0003080,3.92e-07,40;UBERON:0001049,6.65e-07,52;UBERON:0005068,6.65e-07,52;UBERON:0006241,6.65e-07,52;UBERON:0007135,6.65e-07,52|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,3.30347642998166,1.78762273319263,5.06901559745603,0,0,0,1.3959149950069,2.25105044012672,0.763991238884051,0,0.427115042397309,0,0,0.151143120213571,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0.433798070759735,0.884610551949874,0.323533699894818,1.10420759230197,0,0,2.04946557908083,2.09446706813455,0,0,0,0,3.74476598512057,5.03250663100489,0.502617408451458,1.73824320192276,2.30143911597297,3.53239675751252,1.62241263067758,0,0.622034853050465,0,0.631325567659422,0.130120442962704,0,0.360124259610698,0.452114453507145,0.272145996605311,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0,0.900310307305074,0.473489471170421,2.16440654922144,3.23960937063494,4.41814495025775,2.68273401399619,4.08678698285093,1.48103864922132,1.97000956894914,2.02672023864639,1.90059983652932,5.70830299756732,3.75777972529041,1.26173969138476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0.983528546038072,0,1.76605648986571,0.703270119553219,0,14.1383719234449,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81374878235628,0.484393280087717,0.422190474497091,0.477489376012546,0,0,0.741701208042039,0,0,0.740778109478847,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.38902419376282,0,0,0,0,0.187682475451182,0,0,0,2.25900737046827,2.30162618253588,2.29158205375759,2.40594455281163,1.37016503954128,2.2661816921691,0.675022500231806,3.15224842256954,2.26571204492102,2.07104124700728,0,0,0,0.729320151204882,0.419226325255965,0.367687016900028,0.44449345560323,1.03017528619447,1.60459604795908,0.505394423527595,1.52087579934144,0.754505365544305,1.03005658216871,1.15245274328765,1.03383844120104,0,1.50649623728312,1.35036454324594,1.64834360321323,1.03039244094078,1.37147700954166,1.4198064492747,2.62279808942053,1.74415699958794,1.2234219453993,1.4384483341585,0.73171189149109,1.57841826862706,2.03706170768793,2.80571135828869,0.711810108745045,1.37906275325789,0.818462086339379,1.23949472948773,0.964533054905707,0.499621155875892,0.701794825336225,0.859484216193193,0.765153328275374,1.10295709559758,0.231867835620421|short_description=p6@Slc4a4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54403 | |||
|HGNC= | |||
|MCL_coexpression_id=311 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z7I7 | |||
|association_with_transcript=-292bp_to_ENSMUST00000144713_5end | |||
|cluster_id=chr5:89363237..89363264,+ | |||
|description=CAGE_peak_6_at_Slc4a4_5end | |||
|id=chr5:89363237..89363264,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.41e-09!63;UBERON:0002021!1.15e-08!10;UBERON:0000411!1.15e-08!10;UBERON:0001950!1.15e-08!10;UBERON:0007100!2.91e-08!18;UBERON:0000948!2.91e-08!18;UBERON:0005498!2.91e-08!18;UBERON:0004140!2.91e-08!18;UBERON:0009881!2.91e-08!18;UBERON:0004141!2.91e-08!18;UBERON:0003084!2.91e-08!18;UBERON:0007005!2.91e-08!18;UBERON:0004139!2.91e-08!18;UBERON:0004291!2.91e-08!18;UBERON:0000955!7.87e-08!50;UBERON:0006238!7.87e-08!50;UBERON:0002616!3.07e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.30e-11,10;UBERON:0000411,1.30e-11,10;UBERON:0001950,1.30e-11,10;UBERON:0010314,1.74e-09,92;UBERON:0000073,1.75e-09,54;UBERON:0000955,2.32e-09,47;UBERON:0006238,2.32e-09,47;UBERON:0007100,6.64e-09,18;UBERON:0000948,6.64e-09,18;UBERON:0005498,6.64e-09,18;UBERON:0004140,6.64e-09,18;UBERON:0009881,6.64e-09,18;UBERON:0004141,6.64e-09,18;UBERON:0003084,6.64e-09,18;UBERON:0007005,6.64e-09,18;UBERON:0004139,6.64e-09,18;UBERON:0004291,6.64e-09,18;UBERON:0002616,1.82e-08,46;UBERON:0002619,2.92e-07,17;UBERON:0003528,3.08e-07,29;UBERON:0002791,3.08e-07,29;UBERON:0001893,3.08e-07,29;UBERON:0003080,3.92e-07,40;UBERON:0001049,6.65e-07,52;UBERON:0005068,6.65e-07,52;UBERON:0006241,6.65e-07,52;UBERON:0007135,6.65e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,3.30347642998166,1.78762273319263,5.06901559745603,0,0,0,1.3959149950069,2.25105044012672,0.763991238884051,0,0.427115042397309,0,0,0.151143120213571,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0.433798070759735,0.884610551949874,0.323533699894818,1.10420759230197,0,0,2.04946557908083,2.09446706813455,0,0,0,0,3.74476598512057,5.03250663100489,0.502617408451458,1.73824320192276,2.30143911597297,3.53239675751252,1.62241263067758,0,0.622034853050465,0,0.631325567659422,0.130120442962704,0,0.360124259610698,0.452114453507145,0.272145996605311,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0,0.900310307305074,0.473489471170421,2.16440654922144,3.23960937063494,4.41814495025775,2.68273401399619,4.08678698285093,1.48103864922132,1.97000956894914,2.02672023864639,1.90059983652932,5.70830299756732,3.75777972529041,1.26173969138476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0.983528546038072,0,1.76605648986571,0.703270119553219,0,14.1383719234449,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81374878235628,0.484393280087717,0.422190474497091,0.477489376012546,0,0,0.741701208042039,0,0,0.740778109478847,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.38902419376282,0,0,0,0,0.187682475451182,0,0,0,2.25900737046827,2.30162618253588,2.29158205375759,2.40594455281163,1.37016503954128,2.2661816921691,0.675022500231806,3.15224842256954,2.26571204492102,2.07104124700728,0,0,0,0.729320151204882,0.419226325255965,0.367687016900028,0.44449345560323,1.03017528619447,1.60459604795908,0.505394423527595,1.52087579934144,0.754505365544305,1.03005658216871,1.15245274328765,1.03383844120104,0,1.50649623728312,1.35036454324594,1.64834360321323,1.03039244094078,1.37147700954166,1.4198064492747,2.62279808942053,1.74415699958794,1.2234219453993,1.4384483341585,0.73171189149109,1.57841826862706,2.03706170768793,2.80571135828869,0.711810108745045,1.37906275325789,0.818462086339379,1.23949472948773,0.964533054905707,0.499621155875892,0.701794825336225,0.859484216193193,0.765153328275374,1.10295709559758,0.231867835620421 | |||
|short_description=p6@Slc4a4 | |||
}} |
Latest revision as of 07:41, 26 September 2015
Short description: | p6@Slc4a4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Slc4a4_5end |
Coexpression cluster: | MCL_coexpression_mm9:311 |
Association with transcript: | -292bp_to_ENSMUST00000144713_5end |
EntrezGene: | Slc4a4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.30e-11 | 10 |
visual cortex | 1.30e-11 | 10 |
neocortex | 1.30e-11 | 10 |
structure with developmental contribution from neural crest | 1.74e-09 | 92 |
regional part of nervous system | 1.75e-09 | 54 |
brain | 2.32e-09 | 47 |
future brain | 2.32e-09 | 47 |
primary circulatory organ | 6.64e-09 | 18 |
heart | 6.64e-09 | 18 |
primitive heart tube | 6.64e-09 | 18 |
primary heart field | 6.64e-09 | 18 |
anterior lateral plate mesoderm | 6.64e-09 | 18 |
heart tube | 6.64e-09 | 18 |
heart primordium | 6.64e-09 | 18 |
cardiac mesoderm | 6.64e-09 | 18 |
cardiogenic plate | 6.64e-09 | 18 |
heart rudiment | 6.64e-09 | 18 |
regional part of brain | 1.82e-08 | 46 |
regional part of cerebral cortex | 2.92e-07 | 17 |
brain grey matter | 3.08e-07 | 29 |
regional part of telencephalon | 3.08e-07 | 29 |
telencephalon | 3.08e-07 | 29 |
anterior neural tube | 3.92e-07 | 40 |
neural tube | 6.65e-07 | 52 |
neural rod | 6.65e-07 | 52 |
future spinal cord | 6.65e-07 | 52 |
neural keel | 6.65e-07 | 52 |