FFCP PHASE1:Mm9::chr5:75073839..75073898,-: Difference between revisions
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{{FFCP|EntrezGene=16924|HGNC=|MCL_coexpression_id=1|UniProt=O70263,E9Q4N3,E9Q6Q0,D6RHN7,D3YTM4,Q3UUJ9,A4QPD4|association_with_transcript=0bp_to_ENSMUST00000039744,ENSMUST00000113531,ENSMUST00000121690,ENSMUST00000127396,ENSMUST00000153543,NM_001159578,NM_001159579,NM_001159580,NM_010727,uc008xtq.2,uc008xtr.2,uc008xts.2,uc008xtu.2,uc012dxi.1_5end|description=CAGE_peak_2_at_Lnx1_5end|id=chr5:75073839..75073898,-|ontology_enrichment_celltype=CL:0000117!9.50e-10!23;CL:0000337!9.50e-10!23;CL:0000055!3.24e-08!50;CL:0002319!2.21e-07!43;CL:0000393!3.55e-07!39;CL:0000211!3.55e-07!39;CL:0000221!3.70e-07!44;CL:0000133!3.70e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-09,23;CL:0000337,1.13e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.64e-22!73;UBERON:0005743!1.64e-22!73;UBERON:0002346!3.93e-22!71;UBERON:0003075!3.93e-22!71;UBERON:0007284!3.93e-22!71;UBERON:0000073!7.17e-22!75;UBERON:0001016!7.17e-22!75;UBERON:0004121!1.41e-21!102;UBERON:0000924!1.41e-21!102;UBERON:0006601!1.41e-21!102;UBERON:0001049!1.78e-21!52;UBERON:0005068!1.78e-21!52;UBERON:0006241!1.78e-21!52;UBERON:0007135!1.78e-21!52;UBERON:0000955!2.15e-20!50;UBERON:0006238!2.15e-20!50;UBERON:0000033!3.15e-20!63;UBERON:0002616!1.20e-19!49;UBERON:0003056!3.12e-16!49;UBERON:0002020!3.13e-16!34;UBERON:0003080!6.43e-15!40;UBERON:0002780!3.13e-14!39;UBERON:0001890!3.13e-14!39;UBERON:0006240!3.13e-14!39;UBERON:0000025!5.11e-14!114;UBERON:0002791!2.53e-13!29;UBERON:0003528!2.53e-13!29;UBERON:0001893!2.53e-13!29;UBERON:0004111!4.68e-12!122;UBERON:0000956!4.12e-09!21;UBERON:0001869!4.12e-09!21;UBERON:0000203!4.12e-09!21;UBERON:0002619!6.99e-09!17;UBERON:0007811!2.03e-08!86;UBERON:0002021!2.86e-08!10;UBERON:0000411!2.86e-08!10;UBERON:0001950!2.86e-08!10;UBERON:0003076!2.23e-07!12;UBERON:0003057!2.23e-07!12;UBERON:0000468!2.80e-07!333;UBERON:0000153!8.64e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.57e-25,54;UBERON:0001017,6.48e-24,73;UBERON:0001049,2.79e-23,52;UBERON:0005068,2.79e-23,52;UBERON:0006241,2.79e-23,52;UBERON:0007135,2.79e-23,52;UBERON:0001016,1.25e-22,75;UBERON:0002346,5.64e-22,64;UBERON:0003075,5.64e-22,64;UBERON:0007284,5.64e-22,64;UBERON:0010314,1.64e-20,92;UBERON:0000955,1.04e-19,47;UBERON:0006238,1.04e-19,47;UBERON:0004121,5.42e-19,95;UBERON:0000924,5.42e-19,95;UBERON:0006601,5.42e-19,95;UBERON:0002616,7.57e-19,46;UBERON:0002020,2.36e-17,34;UBERON:0010371,2.51e-17,73;UBERON:0003056,2.42e-16,49;UBERON:0003080,1.74e-15,40;UBERON:0002780,1.10e-14,39;UBERON:0001890,1.10e-14,39;UBERON:0006240,1.10e-14,39;UBERON:0003528,6.99e-14,29;UBERON:0002791,6.99e-14,29;UBERON:0001893,6.99e-14,29;UBERON:0000025,4.01e-13,114;UBERON:0004111,3.47e-11,122;UBERON:0002021,8.91e-10,10;UBERON:0000411,8.91e-10,10;UBERON:0001950,8.91e-10,10;UBERON:0002619,9.91e-10,17;UBERON:0000956,6.80e-09,21;UBERON:0001869,6.80e-09,21;UBERON:0000203,6.80e-09,21;UBERON:0003076,1.09e-08,12;UBERON:0003057,1.09e-08,12|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05859308253879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8629990649227,12.8748702648783,14.3166466686112,1.56478268869608,2.18025156380447,2.19686182734472,2.13872888981712,2.51975558925653,4.31257693094915,0,0,0,0.257259436035947,0.85960031981627,2.57836046138721,6.47412674750713,16.398720357433,6.97214543856797,0,0,0,0,0,10.4860038681442,3.84218305321555,0.414758449233911,0.945041568321835,1.68259969081106,24.2803336743233,29.5963844875162,1.71487118900936,1.0543001812006,0.919218786610021,27.5289702498472,20.9407234459708,29.1852413186863,10.1552441552249,13.9976094711687,8.85552729946492,24.2889209131201,23.6360296213306,24.90611438762,18.2669722993674,17.6540884190888,11.7431650869939,0.075726193333184,0.302286240427142,0,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,3.85949561568544,0.520455980298408,0.608930956624282,0.922461989024234,2.71300752994721,2.11659672844269,1.50799909595611,1.73036477414062,2.16899035379867,1.76922110389975,0.647067399789637,1.32504911076236,0.484875253135222,0,29.2780797011547,19.4785437336513,0,0,0,0,34.7514283419189,20.1300265240196,6.40837195775608,34.0695667576862,44.4944895754775,31.5837827730531,28.5544622999253,0.101839363850316,2.23932547098167,4.29628689337247,2.52530227063769,0.520481771850815,0.229902104433473,1.0803727788321,1.9591626318643,2.38127747029647,3.20284300712124,3.74806898238915,15.78090561508,0,0,0,0,0,2.43776516565517,2.88094990971121,0,0,0,0,0.207125772535502,0.234526059981096,1.08037236876609,0.710234206755631,0.983821158737019,1.69693824176116,0.465067889500816,1.07309360559848,1.16765342367169,1.81015834904829,8.20837320395476,7.37726166867287,8.77199924551994,14.0512073786272,4.96563749413376,18.0849355765149,7.40913209130848,0,0,0.853153002140936,0.696710015581316,0.257734922644187,0,1.11189021922435,0.380451252225118,0,0.494096864172033,1.50801125280162,1.1937388322469,0.779856348476481,0.89881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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16924 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=O70263,E9Q4N3,E9Q6Q0,D6RHN7,D3YTM4,Q3UUJ9,A4QPD4 | |||
|association_with_transcript=0bp_to_ENSMUST00000039744,ENSMUST00000113531,ENSMUST00000121690,ENSMUST00000127396,ENSMUST00000153543,NM_001159578,NM_001159579,NM_001159580,NM_010727,uc008xtq.2,uc008xtr.2,uc008xts.2,uc008xtu.2,uc012dxi.1_5end | |||
|cluster_id=chr5:75073839..75073898,- | |||
|description=CAGE_peak_2_at_Lnx1_5end | |||
|id=chr5:75073839..75073898,- | |||
|ontology_enrichment_celltype=CL:0000117!9.50e-10!23;CL:0000337!9.50e-10!23;CL:0000055!3.24e-08!50;CL:0002319!2.21e-07!43;CL:0000393!3.55e-07!39;CL:0000211!3.55e-07!39;CL:0000221!3.70e-07!44;CL:0000133!3.70e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-09,23;CL:0000337,1.13e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.64e-22!73;UBERON:0005743!1.64e-22!73;UBERON:0002346!3.93e-22!71;UBERON:0003075!3.93e-22!71;UBERON:0007284!3.93e-22!71;UBERON:0000073!7.17e-22!75;UBERON:0001016!7.17e-22!75;UBERON:0004121!1.41e-21!102;UBERON:0000924!1.41e-21!102;UBERON:0006601!1.41e-21!102;UBERON:0001049!1.78e-21!52;UBERON:0005068!1.78e-21!52;UBERON:0006241!1.78e-21!52;UBERON:0007135!1.78e-21!52;UBERON:0000955!2.15e-20!50;UBERON:0006238!2.15e-20!50;UBERON:0000033!3.15e-20!63;UBERON:0002616!1.20e-19!49;UBERON:0003056!3.12e-16!49;UBERON:0002020!3.13e-16!34;UBERON:0003080!6.43e-15!40;UBERON:0002780!3.13e-14!39;UBERON:0001890!3.13e-14!39;UBERON:0006240!3.13e-14!39;UBERON:0000025!5.11e-14!114;UBERON:0002791!2.53e-13!29;UBERON:0003528!2.53e-13!29;UBERON:0001893!2.53e-13!29;UBERON:0004111!4.68e-12!122;UBERON:0000956!4.12e-09!21;UBERON:0001869!4.12e-09!21;UBERON:0000203!4.12e-09!21;UBERON:0002619!6.99e-09!17;UBERON:0007811!2.03e-08!86;UBERON:0002021!2.86e-08!10;UBERON:0000411!2.86e-08!10;UBERON:0001950!2.86e-08!10;UBERON:0003076!2.23e-07!12;UBERON:0003057!2.23e-07!12;UBERON:0000468!2.80e-07!333;UBERON:0000153!8.64e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.57e-25,54;UBERON:0001017,6.48e-24,73;UBERON:0001049,2.79e-23,52;UBERON:0005068,2.79e-23,52;UBERON:0006241,2.79e-23,52;UBERON:0007135,2.79e-23,52;UBERON:0001016,1.25e-22,75;UBERON:0002346,5.64e-22,64;UBERON:0003075,5.64e-22,64;UBERON:0007284,5.64e-22,64;UBERON:0010314,1.64e-20,92;UBERON:0000955,1.04e-19,47;UBERON:0006238,1.04e-19,47;UBERON:0004121,5.42e-19,95;UBERON:0000924,5.42e-19,95;UBERON:0006601,5.42e-19,95;UBERON:0002616,7.57e-19,46;UBERON:0002020,2.36e-17,34;UBERON:0010371,2.51e-17,73;UBERON:0003056,2.42e-16,49;UBERON:0003080,1.74e-15,40;UBERON:0002780,1.10e-14,39;UBERON:0001890,1.10e-14,39;UBERON:0006240,1.10e-14,39;UBERON:0003528,6.99e-14,29;UBERON:0002791,6.99e-14,29;UBERON:0001893,6.99e-14,29;UBERON:0000025,4.01e-13,114;UBERON:0004111,3.47e-11,122;UBERON:0002021,8.91e-10,10;UBERON:0000411,8.91e-10,10;UBERON:0001950,8.91e-10,10;UBERON:0002619,9.91e-10,17;UBERON:0000956,6.80e-09,21;UBERON:0001869,6.80e-09,21;UBERON:0000203,6.80e-09,21;UBERON:0003076,1.09e-08,12;UBERON:0003057,1.09e-08,12 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05859308253879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8629990649227,12.8748702648783,14.3166466686112,1.56478268869608,2.18025156380447,2.19686182734472,2.13872888981712,2.51975558925653,4.31257693094915,0,0,0,0.257259436035947,0.85960031981627,2.57836046138721,6.47412674750713,16.398720357433,6.97214543856797,0,0,0,0,0,10.4860038681442,3.84218305321555,0.414758449233911,0.945041568321835,1.68259969081106,24.2803336743233,29.5963844875162,1.71487118900936,1.0543001812006,0.919218786610021,27.5289702498472,20.9407234459708,29.1852413186863,10.1552441552249,13.9976094711687,8.85552729946492,24.2889209131201,23.6360296213306,24.90611438762,18.2669722993674,17.6540884190888,11.7431650869939,0.075726193333184,0.302286240427142,0,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,3.85949561568544,0.520455980298408,0.608930956624282,0.922461989024234,2.71300752994721,2.11659672844269,1.50799909595611,1.73036477414062,2.16899035379867,1.76922110389975,0.647067399789637,1.32504911076236,0.484875253135222,0,29.2780797011547,19.4785437336513,0,0,0,0,34.7514283419189,20.1300265240196,6.40837195775608,34.0695667576862,44.4944895754775,31.5837827730531,28.5544622999253,0.101839363850316,2.23932547098167,4.29628689337247,2.52530227063769,0.520481771850815,0.229902104433473,1.0803727788321,1.9591626318643,2.38127747029647,3.20284300712124,3.74806898238915,15.78090561508,0,0,0,0,0,2.43776516565517,2.88094990971121,0,0,0,0,0.207125772535502,0.234526059981096,1.08037236876609,0.710234206755631,0.983821158737019,1.69693824176116,0.465067889500816,1.07309360559848,1.16765342367169,1.81015834904829,8.20837320395476,7.37726166867287,8.77199924551994,14.0512073786272,4.96563749413376,18.0849355765149,7.40913209130848,0,0,0.853153002140936,0.696710015581316,0.257734922644187,0,1.11189021922435,0.380451252225118,0,0.494096864172033,1.50801125280162,1.1937388322469,0.779856348476481,0.898819408654221,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.568474235311454,0.651859905768103,1.18821560042632,1.17345124144251,3.01511263395268,4.76087281772027,1.95133647857799,1.10344600874334,0.664394068946325,1.11618338060241,0.491589944147214,1.38147985492716,0.289298117163023,0,0,0,0.275936746304732,35.481680387302,29.3029216480508,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,37.2732727049296,2.6968616189571,1.24645922567079,0.81443479676788,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0.712994756769443,0.316036757935816,0,0,7.48967132658334,0.18006109403131,0,0.428674070063185,1.24138163549592,1.78368817602071,3.45552943264454,5.17590413494819,0,0.42366414172764,0,0.98931751764888,0.322928853391811,0.301564624640779,0.119372344003136,0,0.582961673259701,31.5223013417866,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,1.01659733563424,0.324016022465404,0.418176592028937,0.655087691238533,0.539457385539283,0.743881101528023,0.785267825952089,0,0,1.12738587736838,0.149516546043979,0,0.388902376688095,0.129159823477731,0.506868376472335,0.117357238645754,0.911430693907651,3.04092098834561,5.55643477899814,4.32045009386798,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,46.8744029372165,37.2863441570813,39.5297904273184,24.4031518928036,32.8839609489908,31.7265436903674,32.4010800111267,30.1715206160228,29.4542565839733,32.6188996403647,0,0,0.682934423016537,0.972426868273176,1.46729213839588,0.735374033800057,3.55594764482584,4.12070114477788,3.53011130550997,3.03236654116557,3.54871019846336,3.01802146217722,1.96647165686753,2.24088033417042,3.15895079255873,2.38146845641537,3.24476112645595,3.27945674788299,3.70877310722976,3.09117732282234,2.74295401908332,2.8396128985494,2.38436189947321,3.19762116591123,2.35273451038327,2.36920902096694,2.74391959309159,4.73525480588117,3.39510284614654,5.61142271657738,3.2031454893527,2.06859412988683,2.86461730218783,1.85924209423159,3.47231899766054,5.24602213669686,2.33931608445408,2.14871054048298,1.91288332068843,2.42650561031467,1.15933917810211 | |||
|short_description=p2@Lnx1 | |||
}} |
Latest revision as of 05:20, 26 September 2015
Short description: | p2@Lnx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lnx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000039744, ENSMUST00000113531, ENSMUST00000121690, ENSMUST00000127396, ENSMUST00000153543, NM_001159578, NM_001159579, NM_001159580, NM_010727, uc008xtq.2, uc008xtr.2, uc008xts.2, uc008xtu.2, uc012dxi.1_5end |
EntrezGene: | Lnx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.13e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.13e-09 | 23 |