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FFCP PHASE1:Mm9::chr10:85961617..85961654,-: Difference between revisions

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(Created page with "{{FFCP |id=chr10:85961617..85961654,- |short_description=p1@Syn3 |description=CAGE_peak_1_at_Syn3_5end |association_with_transcript=0bp_to_ENSMUST00000121789,ENSMUST000001...")
 
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{{FFCP
{{FFCP
|id=chr10:85961617..85961654,-
|DHSsupport=NA
|short_description=p1@Syn3
|DPIdataset=NA
|description=CAGE_peak_1_at_Syn3_5end
|association_with_transcript=0bp_to_ENSMUST00000121789,ENSMUST00000139197,NM_001164495,NM_013722,uc007gnn.2,uc007gnt.2,uc007gnu.2,uc011xks.1_5end
|EntrezGene=27204
|EntrezGene=27204
|HGNC=
|HGNC=
|MCL_coexpression_id=2596
|TSSclassifier=NA
|UniProt=D3Z620,Q3KN99,Q8JZP2
|UniProt=D3Z620,Q3KN99,Q8JZP2
|association_with_transcript=0bp_to_ENSMUST00000121789,ENSMUST00000139197,NM_001164495,NM_013722,uc007gnn.2,uc007gnt.2,uc007gnu.2,uc011xks.1_5end
|cluster_id=chr10:85961617..85961654,-
|description=CAGE_peak_1_at_Syn3_5end
|id=chr10:85961617..85961654,-
|ontology_enrichment_celltype=CL:0000540!4.20e-17!33;CL:0000047!4.20e-17!33;CL:0000031!4.20e-17!33;CL:0000404!4.20e-17!33;CL:0000393!4.05e-11!39;CL:0000211!4.05e-11!39;CL:0000117!4.31e-11!23;CL:0000337!4.31e-11!23;CL:0000221!5.63e-09!44;CL:0000133!5.63e-09!44;CL:0002319!1.18e-08!43;CL:0000107!6.93e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,2.62e-17,33;CL:0000047,2.62e-17,33;CL:0000031,2.62e-17,33;CL:0000404,2.62e-17,33;CL:0000117,3.22e-11,23;CL:0000337,3.22e-11,23;CL:0000393,3.25e-11,39;CL:0000211,3.25e-11,39;CL:0000221,9.18e-09,44;CL:0000133,9.18e-09,44;CL:0002319,1.92e-08,43;CL:0000107,5.88e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.08e-25!73;UBERON:0005743!3.08e-25!73;UBERON:0000073!1.98e-23!75;UBERON:0001016!1.98e-23!75;UBERON:0004121!1.03e-21!102;UBERON:0000924!1.03e-21!102;UBERON:0006601!1.03e-21!102;UBERON:0002346!1.51e-20!71;UBERON:0003075!1.51e-20!71;UBERON:0007284!1.51e-20!71;UBERON:0000033!1.18e-18!63;UBERON:0001049!2.29e-18!52;UBERON:0005068!2.29e-18!52;UBERON:0006241!2.29e-18!52;UBERON:0007135!2.29e-18!52;UBERON:0000955!1.90e-17!50;UBERON:0006238!1.90e-17!50;UBERON:0002616!8.60e-17!49;UBERON:0003056!1.04e-15!49;UBERON:0003080!1.30e-14!40;UBERON:0002020!3.54e-14!34;UBERON:0002780!6.20e-14!39;UBERON:0001890!6.20e-14!39;UBERON:0006240!6.20e-14!39;UBERON:0002791!1.25e-11!29;UBERON:0003528!1.25e-11!29;UBERON:0001893!1.25e-11!29;UBERON:0007811!6.16e-08!86;UBERON:0000468!6.87e-08!333;UBERON:0000956!9.00e-08!21;UBERON:0001869!9.00e-08!21;UBERON:0000203!9.00e-08!21;UBERON:0000153!1.83e-07!94;UBERON:0000489!3.96e-07!21;UBERON:0000922!5.73e-07!328;UBERON:0002410!6.93e-07!9;UBERON:0002021!9.44e-07!10;UBERON:0000411!9.44e-07!10;UBERON:0001950!9.44e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.99e-25,73;UBERON:0001016,2.72e-23,75;UBERON:0004121,3.94e-22,95;UBERON:0000924,3.94e-22,95;UBERON:0006601,3.94e-22,95;UBERON:0002346,7.87e-22,64;UBERON:0003075,7.87e-22,64;UBERON:0007284,7.87e-22,64;UBERON:0010371,3.91e-20,73;UBERON:0000073,1.22e-19,54;UBERON:0001049,1.68e-18,52;UBERON:0005068,1.68e-18,52;UBERON:0006241,1.68e-18,52;UBERON:0007135,1.68e-18,52;UBERON:0003056,7.46e-16,49;UBERON:0000955,8.60e-16,47;UBERON:0006238,8.60e-16,47;UBERON:0002616,3.80e-15,46;UBERON:0003080,9.73e-15,40;UBERON:0002020,2.70e-14,34;UBERON:0002780,4.72e-14,39;UBERON:0001890,4.72e-14,39;UBERON:0006240,4.72e-14,39;UBERON:0010314,2.68e-12,92;UBERON:0003528,1.03e-11,29;UBERON:0002791,1.03e-11,29;UBERON:0001893,1.03e-11,29;UBERON:0000956,8.22e-08,21;UBERON:0001869,8.22e-08,21;UBERON:0000203,8.22e-08,21;UBERON:0000489,3.34e-07,21;UBERON:0002410,5.88e-07,9;UBERON:0002021,8.05e-07,10;UBERON:0000411,8.05e-07,10;UBERON:0001950,8.05e-07,10
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4754,22.5900737046827,18.4130094602871,25.2074025913335,14.2638141345261,23.2928056722018,22.661816921691,20.925697507186,25.6683085837806,25.8291173120997,33.1366599521165,1.764384908931,8.37952234142165,9.21961471072325,5.10524105843418,3.98265008993166,3.49302666055027,8.22312892865976,7.62329711783909,11.2321723357135,5.81203587056734,3.8021894983536,6.41329560712659,5.3375659257833,5.76226371643823,5.28406314391642,6.19181798667996,4.98302601562879,5.98018583437486,4.94503080963968,5.5935589651071,3.77156177623957,5.32427418478012,6.19934093863034,6.24989591519013,4.42314087952054,3.46919892355874,4.57319932181931,4.99832451731901,5.56796866768033,7.85599180320834,6.16902094245706,4.33419722452479,5.72923460437565,4.64810523557898,4.82266527452853,9.74261253957989,6.08222181958062,4.51229213501426,2.29545998482612,1.54413993383661,1.62307484934295
|phase1_expression=12.8119077683835,0,0,0,0,2.18243053485457,1.16806320297763,0,0,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0.274228867211478,0.42438965179803,8.24919914465377,3.47518329203099,16.7167865048919,1.11994695955385,0.91763712426868,0.57423196411502,0,0.430942465371778,1.14014051673824,0.756090389279792,0,0,0,0,5.48818077527422,2.1610503896604,4.28755648150975,0,0,0,0,0,0,1.1330713617802,0.811015449756117,0.734187008646726,0,0.65407546914134,0.219686182734472,1.1665793944457,0.419959264876088,0,0,0,0,0,0,0,15.578367486189,15.869729378161,10.1413024560989,0,0,0,0,0,0.898800331555214,1.15265491596466,8.39885859698669,8.91039192989158,6.52007380189284,17.7103610330358,13.4729809980484,12.1265891222804,9.10531974673246,11.0306254393203,26.4278114398533,23.6221575457597,23.348193054949,15.1669230889723,14.729510619988,10.939180781692,24.5681039121215,22.5105044012672,20.3221669543157,28.2843442054721,23.7760706934502,18.0807462450542,0.151452386666368,0.529000920747499,7.8263411949453,2.58127163094416,0.679971333707751,3.77792234146472,5.19821133958135,2.24013443548668,2.24711072210803,0,0,0,9.71819596459095,0,0,0,0.865964164044856,2.02687892380079,1.51657333504435,1.7127581957859,1.8125651855302,4.00793775475027,7.28638372417771,4.56698217468212,2.07553947530453,2.41156224884196,6.23220147819235,2.38766523526383,2.47194967734374,2.74738778147832,0,0.323533699894818,0.441683036920787,1.45462575940567,9.31958806090611,21.958559775866,18.850203613211,1.78819938646014,1.67741174308288,0.599902730993408,0.762421362438388,53.6250489069265,40.2600530480391,19.476424577494,30.0716073932638,32.2201476236216,22.8566849015516,28.0677385107221,17.720049309955,3.23458123586242,5.81262344397452,3.99839526184301,6.63614259109789,4.82794419310293,4.32149111532838,7.53524089178575,7.41597840749474,8.45550553880009,6.46541899462129,11.9003550539947,3.01795190105979,4.9167580843633,6.862093842394,1.97276159184817,3.89266148915837,3.1342694986995,2.46938563689532,10.3497818745616,0,0,0.568326998791185,2.27838349789052,2.57978665979206,1.08037236876609,3.07768156260773,2.36117078096885,2.93107514486019,1.39520366850245,0.804820204198858,1.16765342367169,1.15191894939436,1.64167464079095,0.729619285912702,1.02339991197733,0.878200461164203,1.47627060636409,16.4026159880019,8.12946437796347,1.32167513193519,1.05780226665418,6.61193576659225,5.80591679651096,4.51036114627327,4.84040459096022,6.0042071838115,5.32631753115166,2.37264530772256,5.10566759644434,7.28872105520782,7.36138946552258,5.45899443933536,5.39291645192533,2.16138049874694,5.57595565112228,5.12103332573321,11.3106027483632,16.9061603509621,14.6628956048626,14.1585315632367,13.9570281581734,11.3193401452421,8.85660887877613,9.41992367048249,5.92306386824642,5.63259991465583,0.667380422864376,0.589676985339609,0.674586337154561,0.202860121388503,1.20588579876208,0.25462585178142,2.5892652370573,1.62135226775035,1.92192989231657,5.75072826109418,4.09355042435354,3.12037673114561,6.56705082662491,1.61457672169721,1.4473305640901,4.0645701836653,1.89491411770485,4.23708938749267,3.90413697282933,2.81628297946203,5.52770649557992,4.52282917683426,1.17080188714679,3.4679731703362,3.32197034473162,2.39182152986231,3.11340297959902,3.10832967358612,2.4590339958857,0,0,4.42587845717133,3.03530420935206,48.0046264063498,38.4454332022426,0.327869890753351,0.252470927204373,25.5561657727168,37.0916807081807,52.5633090468029,18.4005974423465,16.4871018820972,30.5722653251939,32.3848561339915,45.2996579762533,62.0601811376042,33.7387382242897,2.83880170416537,2.31485284767432,4.56083486190013,4.61916344323099,5.30980553359851,3.8844901784797,4.53485335447127,3.01768127609437,2.95301892880773,4.30409207121498,4.65170927702798,7.63420831902762,7.84294232446387,3.79244109522979,5.27093042874994,5.15677716240934,7.14923172082955,6.12207719706455,4.65691261617916,8.57348140126369,12.4138163549592,9.0968096977056,8.06290200950393,3.65357938937519,0.469343416127421,0,8.15955072803359,1.48397627647332,1.77610869365496,2.0506394475573,2.50681922406587,3.93938159388147,4.66369338607761,42.6478194624172,0.512612642393558,1.03193433981611,0.555583582109135,0.188368457004691,0.27338845544205,0.228778173206523,4.9293744698218,3.91864066506242,2.9021994498929,1.90934123603023,6.64305586520384,7.9294592179471,6.04829908602087,7.10900206449194,6.33251434863915,5.25970950900801,6.86023682520288,4.18809507174447,4.53652406521275,3.10669656543463,0.56369293868419,4.63501292736334,2.31641886639937,4.27792614356905,4.90807329215378,5.06868376472335,8.68443565978579,5.59878854828985,5.24296722128554,2.41584120826006,0.864090018773596,0.632022241256357,5.0681303822541,5.85452455839515,3.24802057444488,1.25318686967237,2.98022032171897,1.32214994471966,0.886137163047463,1.41353029927407,1.98137697303,1.61321896218945,0.974578807397524,0.865906574762965,1.28564592399726,1.58711268530648,0,0.0897138566094757,0,4.82973985080476,1.87682475451182,4.2124873581471,2.57242054894879,3.51100472824754,22.5900737046827,18.4130094602871,25.2074025913335,14.2638141345261,23.2928056722018,22.661816921691,20.925697507186,25.6683085837806,25.8291173120997,33.1366599521165,1.764384908931,8.37952234142165,9.21961471072325,5.10524105843418,3.98265008993166,3.49302666055027,8.22312892865976,7.62329711783909,11.2321723357135,5.81203587056734,3.8021894983536,6.41329560712659,5.3375659257833,5.76226371643823,5.28406314391642,6.19181798667996,4.98302601562879,5.98018583437486,4.94503080963968,5.5935589651071,3.77156177623957,5.32427418478012,6.19934093863034,6.24989591519013,4.42314087952054,3.46919892355874,4.57319932181931,4.99832451731901,5.56796866768033,7.85599180320834,6.16902094245706,4.33419722452479,5.72923460437565,4.64810523557898,4.82266527452853,9.74261253957989,6.08222181958062,4.51229213501426,2.29545998482612,1.54413993383661,1.62307484934295
|short_description=p1@Syn3
}}
}}

Latest revision as of 12:40, 26 September 2015

Short description:p1@Syn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Syn3_5end
Coexpression cluster:MCL_coexpression_mm9:2596
Association with transcript: 0bp_to_ENSMUST00000121789, ENSMUST00000139197, NM_001164495, NM_013722, uc007gnn.2, uc007gnt.2, uc007gnu.2, uc011xks.1_5end
EntrezGene:Syn3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Syn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.72
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C315.58
Mouse Granule cells, donor2.CNhs12357.11731-123E315.87
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.40
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.13
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F323.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E522.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D628.28
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.78
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C57.29
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C16.23
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B221.96
cerebellum, neonate N30.CNhs11135.1395-42I218.85
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A453.63
corpus striatum, adult.CNhs10487.19-21D840.26
corpus striatum, neonate N00.CNhs11226.630-43F119.48
cortex, adult.CNhs10473.12-14D530.07
cortex, neonate N30.CNhs11107.1392-42F232.22
diencephalon, adult.CNhs10482.20-12F222.86
diencephalon, neonate N30.CNhs11201.1388-42B228.07
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.72
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C66.64
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D47.54
eyeball, neonate N00.CNhs11207.633-15C67.42
eyeball, neonate N01.CNhs11140.1532-43E78.46
eyeball, neonate N02.CNhs11205.1551-44G86.47
eyeball, neonate N16.CNhs11188.777-19A211.90
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H24.92
forelimb, embryo E13.CNhs10589.384-1E26.86
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I610.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E816.40
hippocampus, neonate N00.CNhs11228.627-43G18.13
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I56.61
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D84.51
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F75.33
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F27.36
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G15.58
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F811.31
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I214.66
kidney, embryo E18.CNhs11001.1288-20C714.16
kidney, neonate N00.CNhs11214.646-21G713.96
kidney, neonate N10.CNhs11206.758-6D511.32
kidney, neonate N20.CNhs11113.832-19I18.86
kidney, neonate N25.CNhs11122.1353-25F39.42
kidney, neonate N30.CNhs11203.1385-42H15.92
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C248.00
medulla oblongata, neonate N30.CNhs11200.1396-42A338.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E125.56
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E237.09
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E352.56
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.40
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D930.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D432.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D545.30
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D662.06
olfactory brain, adult.CNhs10489.18-22I933.74
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I44.56
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E53.02
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A58.57
pituitary gland, embryo E15.CNhs10592.427-16B912.41
pituitary gland, embryo E16.CNhs11036.449-43F69.10
pituitary gland, embryo E17.CNhs11039.1265-44F58.06
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F88.16
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H32.05
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C942.65
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.90
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E36.64
stomach, embryo E15.CNhs10603.1252-16G87.93
stomach, embryo E16.CNhs11022.459-17D46.05
stomach, embryo E17.CNhs11006.1035-18D57.11
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B85.26
stomach, neonate N07.CNhs11210.718-18A96.86
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I14.54
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G54.28
testis, embryo E17.CNhs11029.486-18I54.91
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B78.68
testis, neonate N07.CNhs11222.726-26I45.60
testis, neonate N10.CNhs11204.763-44D95.24
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I25.85
thymus, embryo E16.CNhs11002.456-26C53.25
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A725.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.83
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.14
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H29.22
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.23
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.76
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.65
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.99e-2573
nervous system2.72e-2375
ectoderm-derived structure3.94e-2295
ectoderm3.94e-2295
presumptive ectoderm3.94e-2295
neurectoderm7.87e-2264
neural plate7.87e-2264
presumptive neural plate7.87e-2264
ecto-epithelium3.91e-2073
regional part of nervous system1.22e-1954
neural tube1.68e-1852
neural rod1.68e-1852
future spinal cord1.68e-1852
neural keel1.68e-1852
pre-chordal neural plate7.46e-1649
brain8.60e-1647
future brain8.60e-1647
regional part of brain3.80e-1546
anterior neural tube9.73e-1540
gray matter2.70e-1434
regional part of forebrain4.72e-1439
forebrain4.72e-1439
future forebrain4.72e-1439
structure with developmental contribution from neural crest2.68e-1292
brain grey matter1.03e-1129
regional part of telencephalon1.03e-1129
telencephalon1.03e-1129
cerebral cortex8.22e-0821
cerebral hemisphere8.22e-0821
pallium8.22e-0821
cavitated compound organ3.34e-0721
autonomic nervous system5.88e-079
occipital lobe8.05e-0710
visual cortex8.05e-0710
neocortex8.05e-0710
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