FFCP PHASE1:Mm9::chr5:30890839..30890852,-: Difference between revisions
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{{FFCP|EntrezGene=100502829|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=139bp_to_NR_040427,uc008wvq.1_5end|description=CAGE_peak_2_at_Gm9899_5end|id=chr5:30890839..30890852,-|ontology_enrichment_celltype=CL:0000117!1.60e-12!23;CL:0000337!1.60e-12!23;CL:0000540!1.59e-09!33;CL:0000047!1.59e-09!33;CL:0000031!1.59e-09!33;CL:0000404!1.59e-09!33;CL:0000393!2.82e-07!39;CL:0000211!2.82e-07!39|ontology_enrichment_celltype_v019_2=CL:0002610,6.10e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.44e-25!73;UBERON:0005743!1.44e-25!73;UBERON:0000955!1.80e-25!50;UBERON:0006238!1.80e-25!50;UBERON:0001049!4.38e-25!52;UBERON:0005068!4.38e-25!52;UBERON:0006241!4.38e-25!52;UBERON:0007135!4.38e-25!52;UBERON:0000073!1.59e-24!75;UBERON:0001016!1.59e-24!75;UBERON:0002616!1.65e-24!49;UBERON:0002020!3.98e-24!34;UBERON:0002346!8.29e-24!71;UBERON:0003075!8.29e-24!71;UBERON:0007284!8.29e-24!71;UBERON:0000033!1.00e-21!63;UBERON:0002791!1.93e-21!29;UBERON:0003528!1.93e-21!29;UBERON:0001893!1.93e-21!29;UBERON:0004121!1.80e-20!102;UBERON:0000924!1.80e-20!102;UBERON:0006601!1.80e-20!102;UBERON:0003080!3.49e-18!40;UBERON:0002780!3.86e-17!39;UBERON:0001890!3.86e-17!39;UBERON:0006240!3.86e-17!39;UBERON:0003056!6.10e-17!49;UBERON:0002021!2.41e-15!10;UBERON:0000411!2.41e-15!10;UBERON:0001950!2.41e-15!10;UBERON:0000956!8.52e-15!21;UBERON:0001869!8.52e-15!21;UBERON:0000203!8.52e-15!21;UBERON:0007811!7.38e-13!86;UBERON:0002619!4.85e-11!17;UBERON:0000153!7.71e-11!94;UBERON:0000025!4.84e-10!114;UBERON:0004111!1.24e-08!122;UBERON:0002298!3.39e-08!6;UBERON:0002420!7.74e-08!8;UBERON:0007245!7.74e-08!8;UBERON:0010009!7.74e-08!8;UBERON:0010011!7.74e-08!8;UBERON:0000454!7.74e-08!8;UBERON:0003076!1.75e-07!12;UBERON:0003057!1.75e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.92e-40,10;UBERON:0000411,4.92e-40,10;UBERON:0001950,4.92e-40,10;UBERON:0000073,7.30e-26,54;UBERON:0002619,7.02e-23,17;UBERON:0001017,1.36e-22,73;UBERON:0000956,5.10e-22,21;UBERON:0001869,5.10e-22,21;UBERON:0000203,5.10e-22,21;UBERON:0002616,6.59e-22,46;UBERON:0001016,6.71e-22,75;UBERON:0001049,1.53e-21,52;UBERON:0005068,1.53e-21,52;UBERON:0006241,1.53e-21,52;UBERON:0007135,1.53e-21,52;UBERON:0003528,1.67e-21,29;UBERON:0002791,1.67e-21,29;UBERON:0001893,1.67e-21,29;UBERON:0000955,2.23e-21,47;UBERON:0006238,2.23e-21,47;UBERON:0003080,7.11e-20,40;UBERON:0002020,5.38e-18,34;UBERON:0002780,8.16e-18,39;UBERON:0001890,8.16e-18,39;UBERON:0006240,8.16e-18,39;UBERON:0002346,6.53e-17,64;UBERON:0003075,6.53e-17,64;UBERON:0007284,6.53e-17,64;UBERON:0004121,1.47e-16,95;UBERON:0000924,1.47e-16,95;UBERON:0006601,1.47e-16,95;UBERON:0003056,1.00e-15,49;UBERON:0010371,1.96e-14,73;UBERON:0004684,6.10e-12,3;UBERON:0002275,6.10e-12,3;UBERON:0010314,8.73e-11,92;UBERON:0000025,4.52e-08,114;UBERON:0004111,2.52e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.210324961351382,0.856952953211411,0.220868540951614,0,0,0,2.20231761998777,1.40456071893706,1.68967186581868,0.395658863190582,0.640413505216868,0,1.67509799400829,0.56276261003168,0.61119299110724,0,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890652834388949,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,1.04853447583376,1.83000241127451,0.879580464790051,2.25971616249959,2.30143911597297,1.0389402227978,0.648965052271031,0,0,0,0,0,0,0,0.150704817835715,0,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.329119699826961,0.164167464079095,0,0.146199987425332,0,0.268412837520744,0.630869845692382,0.308713837137853,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0.315508219416257,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,4.14292712856459,5.15605962095457,4.29632955859219,4.7955776383945,6.7985450765073,4.05013500139084,2.2516060161211,6.79713613476307,2.5888015587591,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421|short_description=p2@Gm9899}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100502829 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=139bp_to_NR_040427,uc008wvq.1_5end | |||
|cluster_id=chr5:30890839..30890852,- | |||
|description=CAGE_peak_2_at_Gm9899_5end | |||
|id=chr5:30890839..30890852,- | |||
|ontology_enrichment_celltype=CL:0000117!1.60e-12!23;CL:0000337!1.60e-12!23;CL:0000540!1.59e-09!33;CL:0000047!1.59e-09!33;CL:0000031!1.59e-09!33;CL:0000404!1.59e-09!33;CL:0000393!2.82e-07!39;CL:0000211!2.82e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,6.10e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.44e-25!73;UBERON:0005743!1.44e-25!73;UBERON:0000955!1.80e-25!50;UBERON:0006238!1.80e-25!50;UBERON:0001049!4.38e-25!52;UBERON:0005068!4.38e-25!52;UBERON:0006241!4.38e-25!52;UBERON:0007135!4.38e-25!52;UBERON:0000073!1.59e-24!75;UBERON:0001016!1.59e-24!75;UBERON:0002616!1.65e-24!49;UBERON:0002020!3.98e-24!34;UBERON:0002346!8.29e-24!71;UBERON:0003075!8.29e-24!71;UBERON:0007284!8.29e-24!71;UBERON:0000033!1.00e-21!63;UBERON:0002791!1.93e-21!29;UBERON:0003528!1.93e-21!29;UBERON:0001893!1.93e-21!29;UBERON:0004121!1.80e-20!102;UBERON:0000924!1.80e-20!102;UBERON:0006601!1.80e-20!102;UBERON:0003080!3.49e-18!40;UBERON:0002780!3.86e-17!39;UBERON:0001890!3.86e-17!39;UBERON:0006240!3.86e-17!39;UBERON:0003056!6.10e-17!49;UBERON:0002021!2.41e-15!10;UBERON:0000411!2.41e-15!10;UBERON:0001950!2.41e-15!10;UBERON:0000956!8.52e-15!21;UBERON:0001869!8.52e-15!21;UBERON:0000203!8.52e-15!21;UBERON:0007811!7.38e-13!86;UBERON:0002619!4.85e-11!17;UBERON:0000153!7.71e-11!94;UBERON:0000025!4.84e-10!114;UBERON:0004111!1.24e-08!122;UBERON:0002298!3.39e-08!6;UBERON:0002420!7.74e-08!8;UBERON:0007245!7.74e-08!8;UBERON:0010009!7.74e-08!8;UBERON:0010011!7.74e-08!8;UBERON:0000454!7.74e-08!8;UBERON:0003076!1.75e-07!12;UBERON:0003057!1.75e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.92e-40,10;UBERON:0000411,4.92e-40,10;UBERON:0001950,4.92e-40,10;UBERON:0000073,7.30e-26,54;UBERON:0002619,7.02e-23,17;UBERON:0001017,1.36e-22,73;UBERON:0000956,5.10e-22,21;UBERON:0001869,5.10e-22,21;UBERON:0000203,5.10e-22,21;UBERON:0002616,6.59e-22,46;UBERON:0001016,6.71e-22,75;UBERON:0001049,1.53e-21,52;UBERON:0005068,1.53e-21,52;UBERON:0006241,1.53e-21,52;UBERON:0007135,1.53e-21,52;UBERON:0003528,1.67e-21,29;UBERON:0002791,1.67e-21,29;UBERON:0001893,1.67e-21,29;UBERON:0000955,2.23e-21,47;UBERON:0006238,2.23e-21,47;UBERON:0003080,7.11e-20,40;UBERON:0002020,5.38e-18,34;UBERON:0002780,8.16e-18,39;UBERON:0001890,8.16e-18,39;UBERON:0006240,8.16e-18,39;UBERON:0002346,6.53e-17,64;UBERON:0003075,6.53e-17,64;UBERON:0007284,6.53e-17,64;UBERON:0004121,1.47e-16,95;UBERON:0000924,1.47e-16,95;UBERON:0006601,1.47e-16,95;UBERON:0003056,1.00e-15,49;UBERON:0010371,1.96e-14,73;UBERON:0004684,6.10e-12,3;UBERON:0002275,6.10e-12,3;UBERON:0010314,8.73e-11,92;UBERON:0000025,4.52e-08,114;UBERON:0004111,2.52e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.210324961351382,0.856952953211411,0.220868540951614,0,0,0,2.20231761998777,1.40456071893706,1.68967186581868,0.395658863190582,0.640413505216868,0,1.67509799400829,0.56276261003168,0.61119299110724,0,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890652834388949,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,1.04853447583376,1.83000241127451,0.879580464790051,2.25971616249959,2.30143911597297,1.0389402227978,0.648965052271031,0,0,0,0,0,0,0,0.150704817835715,0,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.329119699826961,0.164167464079095,0,0.146199987425332,0,0.268412837520744,0.630869845692382,0.308713837137853,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0.315508219416257,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,4.14292712856459,5.15605962095457,4.29632955859219,4.7955776383945,6.7985450765073,4.05013500139084,2.2516060161211,6.79713613476307,2.5888015587591,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p2@Gm9899 | |||
}} |
Latest revision as of 21:51, 25 September 2015
Short description: | p2@Gm9899 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm9899_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 139bp_to_NR_040427, uc008wvq.1_5end |
EntrezGene: | Gm9899 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 6.10e-12 | 3 |