FFCP PHASE1:Hg19::chr9:117783287..117783299,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:117783287..117783299,- | |||
|coexpression_cluster_id=C864 | |||
|description=CAGE_peak_at_chr9:117783287..117783299,- | |||
|id=chr9:117783287..117783299,- | |||
|ontology_enrichment_celltype=CL:0000055!2.22e-08!180;CL:0002620!1.91e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.16e-15;6!CL:0000153;2.34e-14;9!CL:0000447;2.34e-14;9!CL:0000135;3.52e-11;3!CL:0000388;3.52e-11;3!CL:0000499;6.56e-09;28!CL:0000327;2.49e-08;15!CL:0002617;2.69e-08;2!CL:0002583;3.93e-08;2!CL:0002570;3.24e-07;8!CL:0002620;6.95e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.08e-16,6;CL:0000138,7.08e-16,6;CL:0000153,1.38e-14,9;CL:0000447,1.38e-14,9;CL:0000135,2.11e-11,3;CL:0000388,2.11e-11,3;CL:0000499,4.49e-09,28;CL:0000327,1.84e-08,15;CL:0002617,3.60e-08,2;CL:0002583,4.16e-08,2;CL:0000136,4.17e-08,15;CL:0002570,2.89e-07,8;CL:0002620,8.54e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.88e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.06e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.57e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0005156!4.97e-07!59;UBERON:0000990!4.97e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.52e-11;3!UBERON:0000043;3.52e-11;3!UBERON:0007845;3.52e-11;3!UBERON:0002118;3.32e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.11e-11,3;UBERON:0000043,2.11e-11,3;UBERON:0007845,2.11e-11,3;UBERON:0002118,3.78e-07,5 | |||
|phase1_expression=1.09007027562334,3.42560838225573,0,7.00513088471913,0,2.61701557230111,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0.662794751455832,0.672325146451775,0,0,0,0.861847406537515,0,1.88072832886853,0,0.821246550437305,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53007406669196,1.50401373190767,2.89693037921647,7.15757352345989,6.8128881842369,0.567208902984407,0.886917589850256,0.43917392846563,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0,0.125118519871964,0,0,0,0.150238058906597,0,1.61450672119976,0.85422955527427,0.847727604638247,2.40072876867522,0.309157587715317,2.06112432036503,0.18611685633159,2.02531598689519,1.26668106709558,2.27190396819703,0.644349290496095,0,6.39017266529906,0.806016785821122,0,0.193260853163297,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0.845302752556,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,1.49959486773086,0,0,0,0.239624855491583,0,0,0.144781306667579,0.821905290201534,0.179060963239896,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,1.78428988797162,0,0.234282829985426,0,0,0,0.664225598535437,0.553107505625109,0.173767228936166,0,0,0,0,0,0,0,0.907170879989041,0,0.153461973288062,0.561320188866147,0.128139149255701,0,0,0,2.31314540703983,1.42049380250502,0.328508624055237,0.519254429183621,1.27831416305955,0,2.20557117333613,0.368323955743585,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.54941678891006,0.082509499920588,0,0,0,0.290012154876366,0,0.15350367472613,0,0.214840489736547,0,0.170453254832202,1.15741646340759,0.495854746082934,0,0,0.708104465988849,0,0.31481234683064,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0.487426979262569,2.11300293513511,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.844430541190656,1.64647446479951,0,0,0,0,1.08890984861323,0,0.86101074534246,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.779160935160341,1.48323486804084,0,0.19924798825107,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0.416024019039416,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0.558564802544508,0,0.717873024576814,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,2.5926644736038,2.28611152076586,0,0,0.340776043570843,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94031243752936,3.27198633786114,0,3.03044808440143,6.79233334731953,1.77962244319307,0,0,0,0.443565449968902,0.796483835818512,0.899606224327209,2.48420731002015,0,1.06336685823198,0,1.05180326298053,0.761610424337591,2.44122439922797,4.72806513926655,0.859284456339908,0.464033759878494,1.19428766609585,0.400027764663154,1.03018711554838,1.6837474438296,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0.337884881306145,0,0,0,0,0,0,0,2.6208787907713,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0.107824811396682,1.41539347670307,0,0,2.76347396132188,0.247871528518004,0,0.318004350653419,0,0,4.23211132428821,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0.0752103283492573,0.60511520611056,0,0,0.327543835020193,0,0,0,0,0,0.546974809018219,0,0,1.23109871051734,0,0,0,0.606965604236632,0,0,0,0.685952037749674,0,0,0.118193840883968,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,0,0,0.8453114551668,0,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0.5290268405154,2.60396512716726,1.84870251452567,1.29787968637137,0,0,0.253397002022874,0.101988829741982,0,0.0918948995348449,0.250707539292375,0.0757786982182394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| |||
|short_description=p@chr9:117783287..117783299,- | |||
}} |
Latest revision as of 22:08, 31 July 2015
Short description: | p@chr9:117783287..117783299, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:117783287..117783299, - |
Coexpression cluster: | C864_Chondrocyte_peripheral_Fibroblast_Adipocyte_mesenchymal_Neural_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.08e-16 | 6 |
chondrocyte | 7.08e-16 | 6 |
GAG secreting cell | 1.38e-14 | 9 |
carbohydrate secreting cell | 1.38e-14 | 9 |
fibrocyte | 2.11e-11 | 3 |
tendon cell | 2.11e-11 | 3 |
stromal cell | 4.49e-09 | 28 |
extracellular matrix secreting cell | 1.84e-08 | 15 |
adipocyte of breast | 3.60e-08 | 2 |
subcutaneous preadipocyte | 4.16e-08 | 2 |
fat cell | 4.17e-08 | 15 |
mesenchymal stem cell of adipose | 2.89e-07 | 8 |
skin fibroblast | 8.54e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.11e-11 | 3 |
tendon | 2.11e-11 | 3 |
regular connective tissue | 2.11e-11 | 3 |
right ovary | 3.78e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.57e-08 | 14 |