FFCP PHASE1:Mm9::chr5:145992428..145992439,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:145992428..145992439,-|id=chr5:145992428..145992439,-|ontology_enrichment_celltype=CL:0000144!7.05e-10!121;CL:0000012!7.05e-10!121;CL:0000034!1.71e-09!97;CL:0000723!1.88e-09!91;CL:0000048!1.88e-09!91;CL:0002371!6.50e-09!118;CL:0000063!3.07e-08!66;CL:0000548!1.44e-07!115;CL:0000004!1.44e-07!115;CL:0000255!1.44e-07!115;CL:0002320!5.99e-07!46;CL:0000134!5.99e-07!46|ontology_enrichment_celltype_v019_2=CL:0000723,9.83e-11,91;CL:0000048,9.83e-11,91;CL:0000223,1.96e-10,20;CL:0000066,2.65e-10,25;CL:0000034,7.56e-10,97;CL:0002563,8.57e-10,9;CL:0002251,8.57e-10,9;CL:0000838,2.52e-07,12;CL:0000182,4.11e-07,5;CL:0000542,9.66e-07,13;CL:0000051,9.66e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.45e-11,3;DOID:4045,1.45e-11,3;DOID:0050686,3.65e-10,6|ontology_enrichment_uberon=UBERON:0002384!5.99e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.57e-10,9;UBERON:0004808,8.57e-10,9;UBERON:0001277,8.57e-10,9;UBERON:0000490,4.49e-08,66;UBERON:0000485,5.72e-08,11|phase1_expression=0,3.48975407639361,0,1.20985684522732,4.00716583957078,0.16787927191189,0,1.93684985162364,0.140788722151667,0.468129052643987,0,0,3.0816131387617,1.48614684112296,0,0.202475267389826,0,0,0.137114433605739,0,0,0.595745707205312,0,0,0,1.72269589234506,0,0.646413698057667,0.190023419456374,0.504060259519861,0,3.81018404075779,0.61506478758457,0,1.1554064790051,0.498703936075477,1.02084678131185,2.92972141515835,1.5626706890476,1.57057123192139,9.41170380849623,0.683045484958446,0,1.1330713617802,0.709638518536602,0.917733760808408,0,0,0.219686182734472,0.777719596297134,0,0,1.17447824240415,0.725362142011344,1.34437519656986,0,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,1.7997994345628,0,0,0.898800331555214,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.383062014255563,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0.284743361598206,0,0.075726193333184,0.0755715601067855,3.47837386442013,0,0.679971333707751,1.61910957491345,0.649776417447669,1.34408066129201,0,0.852151612890289,0.779358013808606,0,0.422530259330042,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0.718890747035522,0.599902730993408,0.635351135365324,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0.324482526135515,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0.272145996605311,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0,0.556094498451196,0,0.205782136407943,0,0,0.772043721344145,0.852490498186778,0,0,0,0,0,0,0.465067889500816,0.536546802799238,0.116765342367169,0.329119699826961,0,0.243206428637567,0.146199987425332,0.439100230582101,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.280543279561274,0.0632365371242573,0.295220295959204,0.31399745568275,0.123397163921801,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0,0.160550589987792,0.35163505977661,0.163934945376675,0.252470927204373,0.631016438832513,0.780877488593277,0.430846795465598,0.716906393857656,2.00518806674155,1.13230612315533,0.404810701674894,1.75353514746787,0.790575555893047,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0.63549621259146,0.220528398054962,0.16488625294148,0.322928853391811,0.0603129249281559,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0.339956859987711,0.419854356970974,0.414599921413271,0,0,0,0.216010681643603,0,0,0.269728692769641,0.165306911450672,0,0.259229946583586,0,0,0,0,0,0.129159823477731,0.168956125490778,0.58678619322877,0.2604087696879,0.314578033277133,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,1.14579102687879,0,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0,0.50695859978048,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.365855945745545,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p@chr5:145992428..145992439,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:145992428..145992439,- | |||
|description=CAGE_peak_at_chr5:145992428..145992439,- | |||
|id=chr5:145992428..145992439,- | |||
|ontology_enrichment_celltype=CL:0000144!7.05e-10!121;CL:0000012!7.05e-10!121;CL:0000034!1.71e-09!97;CL:0000723!1.88e-09!91;CL:0000048!1.88e-09!91;CL:0002371!6.50e-09!118;CL:0000063!3.07e-08!66;CL:0000548!1.44e-07!115;CL:0000004!1.44e-07!115;CL:0000255!1.44e-07!115;CL:0002320!5.99e-07!46;CL:0000134!5.99e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,9.83e-11,91;CL:0000048,9.83e-11,91;CL:0000223,1.96e-10,20;CL:0000066,2.65e-10,25;CL:0000034,7.56e-10,97;CL:0002563,8.57e-10,9;CL:0002251,8.57e-10,9;CL:0000838,2.52e-07,12;CL:0000182,4.11e-07,5;CL:0000542,9.66e-07,13;CL:0000051,9.66e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.45e-11,3;DOID:4045,1.45e-11,3;DOID:0050686,3.65e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!5.99e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.57e-10,9;UBERON:0004808,8.57e-10,9;UBERON:0001277,8.57e-10,9;UBERON:0000490,4.49e-08,66;UBERON:0000485,5.72e-08,11 | |||
|phase1_expression=0,3.48975407639361,0,1.20985684522732,4.00716583957078,0.16787927191189,0,1.93684985162364,0.140788722151667,0.468129052643987,0,0,3.0816131387617,1.48614684112296,0,0.202475267389826,0,0,0.137114433605739,0,0,0.595745707205312,0,0,0,1.72269589234506,0,0.646413698057667,0.190023419456374,0.504060259519861,0,3.81018404075779,0.61506478758457,0,1.1554064790051,0.498703936075477,1.02084678131185,2.92972141515835,1.5626706890476,1.57057123192139,9.41170380849623,0.683045484958446,0,1.1330713617802,0.709638518536602,0.917733760808408,0,0,0.219686182734472,0.777719596297134,0,0,1.17447824240415,0.725362142011344,1.34437519656986,0,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,1.7997994345628,0,0,0.898800331555214,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.383062014255563,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0.284743361598206,0,0.075726193333184,0.0755715601067855,3.47837386442013,0,0.679971333707751,1.61910957491345,0.649776417447669,1.34408066129201,0,0.852151612890289,0.779358013808606,0,0.422530259330042,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0.718890747035522,0.599902730993408,0.635351135365324,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0.324482526135515,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0.272145996605311,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0,0.556094498451196,0,0.205782136407943,0,0,0.772043721344145,0.852490498186778,0,0,0,0,0,0,0.465067889500816,0.536546802799238,0.116765342367169,0.329119699826961,0,0.243206428637567,0.146199987425332,0.439100230582101,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.280543279561274,0.0632365371242573,0.295220295959204,0.31399745568275,0.123397163921801,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0,0.160550589987792,0.35163505977661,0.163934945376675,0.252470927204373,0.631016438832513,0.780877488593277,0.430846795465598,0.716906393857656,2.00518806674155,1.13230612315533,0.404810701674894,1.75353514746787,0.790575555893047,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0.63549621259146,0.220528398054962,0.16488625294148,0.322928853391811,0.0603129249281559,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0.339956859987711,0.419854356970974,0.414599921413271,0,0,0,0.216010681643603,0,0,0.269728692769641,0.165306911450672,0,0.259229946583586,0,0,0,0,0,0.129159823477731,0.168956125490778,0.58678619322877,0.2604087696879,0.314578033277133,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,1.14579102687879,0,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0,0.50695859978048,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.365855945745545,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr5:145992428..145992439,- | |||
}} |
Latest revision as of 01:23, 4 August 2015
Short description: | p@chr5:145992428..145992439, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:145992428..145992439, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 9.83e-11 | 91 |
multi fate stem cell | 9.83e-11 | 91 |
endodermal cell | 1.96e-10 | 20 |
epithelial cell | 2.65e-10 | 25 |
stem cell | 7.56e-10 | 97 |
intestinal epithelial cell | 8.57e-10 | 9 |
epithelial cell of alimentary canal | 8.57e-10 | 9 |
lymphoid lineage restricted progenitor cell | 2.52e-07 | 12 |
hepatocyte | 4.11e-07 | 5 |
lymphocyte | 9.66e-07 | 13 |
common lymphoid progenitor | 9.66e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 8.57e-10 | 9 |
gastrointestinal system epithelium | 8.57e-10 | 9 |
intestinal epithelium | 8.57e-10 | 9 |
unilaminar epithelium | 4.49e-08 | 66 |
simple columnar epithelium | 5.72e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.45e-11 | 3 |
muscle cancer | 1.45e-11 | 3 |
organ system cancer | 3.65e-10 | 6 |