Personal tools

FFCP PHASE1:Mm9::chr5:137592091..137592111,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=384309|HGNC=|UniProt=D3YVX5|association_with_transcript=-12bp_to_ENSMUST00000152207_5end|description=CAGE_peak_3_at_Trim56_5end|id=chr5:137592091..137592111,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!7.29e-10!193;UBERON:0004120!7.29e-10!193;UBERON:0006603!7.29e-10!193;UBERON:0003104!5.62e-09!131;UBERON:0009142!5.62e-09!131;UBERON:0000077!3.27e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002100,8.08e-07,90|phase1_expression=1.60148847104794,1.74487703819681,0.454999239389536,0.60492842261366,3.00537437967808,1.17515490338323,0.934450562382103,1.03298658753261,0.281577444303333,1.17032263160997,1.19852577757853,0.797721589953364,1.71200729931206,1.48614684112296,4.99664642723494,8.70643649776252,5.59649502502517,1.41957974411207,1.23402990245165,2.54633791078818,2.55129870453209,0.496454756004426,0.783599367416806,1.11994695955385,0.68822784320151,0.57423196411502,0.430761996159075,0.861884930743556,1.14014051673824,0.252030129759931,1.10865255327652,0,3.07532393792285,0,0,0.498703936075477,0.408338712524738,0.837063261473815,1.5626706890476,1.0470474879476,0,2.73218193983378,0.485510353031154,3.14742044938943,2.43304634926835,2.0190142737785,4.69434806608824,2.39827672018491,1.75748946187577,2.13872888981712,1.95980990275508,1.43752564364972,1.00669563634642,0.725362142011344,2.68875039313971,5.14518872071894,3.43840127926508,5.15672092277442,0.809265843438391,1.05798195854407,0.633831403506179,1.35537812827653,0.889294796111139,1.7997994345628,0,2.8419204597844,2.39680088414724,3.07374644257244,0.933206510776299,0.675029691658453,0.420649922702764,0.571301968807607,1.32521124570968,1.10241719293459,0.958454710182364,2.75765635983006,1.10115880999389,1.0214987046815,0.46081959976873,0.131886287730194,0.274462930807229,1.04182674111352,0.837548997004143,1.12552522006336,1.22238598221448,2.06240009831567,0.711858403995515,0.372798891650601,3.40767869999328,3.55186332501892,4.34796733052517,0.860423876981386,0,1.07940638327563,1.29955283489534,0.448026887097336,2.94933282276679,1.87473354835864,3.11743205523443,5.3000936176551,2.25349471642689,3.84979432242953,10.1922095882658,7.11066703153331,2.38140145112336,2.02687892380079,7.58286667522175,1.25602267690966,1.55362730188303,3.85949561568544,1.04091196059682,2.13125834818499,1.61430848079241,2.41156224884196,2.3517741427141,2.01066546127481,3.21353458054686,2.16899035379867,0,1.13236794963186,2.20841518460394,4.84875253135222,0,0,0.41889341362691,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,1.04853447583376,0,0.251308704225729,0.521472960576829,0.255715457330331,0.62336413367868,0,2.24046600470696,2.48813941220186,1.26361379216837,2.31486041475121,1.43132487258974,0.459804208866946,1.80062129805349,1.05493372485001,1.63287597963187,1.0249097622788,1.59292931751539,1.03481348295606,1.5089759505299,0.567318240503458,1.05570674498369,1.7535658594206,1.11218899690239,2.43776516565517,2.05782136407943,1.59227413454795,0,0.257347907114715,0.284163499395593,2.07125772535502,1.64168241986767,1.80062061461015,2.13070262026689,1.37734962223183,2.1597395804233,1.39520366850245,1.3413670069981,1.5179494507732,1.6455984991348,1.47750717671186,1.37816976227955,1.46199987425332,1.3173006917463,0.939444931322602,0.841159794256509,0.205809224758569,0.330418782983798,0.793351699990633,1.70630600428187,0.928946687441754,1.15980715189884,1.21010114774006,2.44615848229357,1.52180500890047,0.474529061544512,0.494096864172033,1.75934646160189,1.39269530428806,0.779856348476481,0.898819408654221,0.648414149624083,0.597423819763102,0.569003702859245,1.48523066392647,3.38123207019241,1.4255592949172,1.74557238450863,1.61312385747733,2.21327879934901,2.80459281161244,2.19798218977925,1.85095745882701,1.48226313543574,2.50267658574141,2.55526693647164,3.14806957338795,6.08580364165509,5.30589751455317,6.11102044275408,4.31544206176216,1.45921704097532,1.92192989231657,0,1.86070473834252,2.18426371180192,1.01031551178845,1.25578189465339,0.964887042726734,3.14080423283228,0.947457058852424,1.95557971730431,3.22515662972857,2.81628297946203,2.51259386162724,4.04674189506223,1.36593553500459,2.36452716159286,1.7717175171902,2.71073106717728,2.29408640602033,3.7990696010497,1.15719246865209,3.01582567878545,1.63171705145613,3.44234991113325,1.10374698521893,0.80275294993896,0.117211686592203,1.47541450839008,0.504941854408746,2.2085575359138,3.12350995437311,2.80050417052639,3.34556317133573,4.67877215573028,3.11384183867716,4.04810701674894,3.50707029493574,3.16230222357219,0.321321316421807,2.83880170416537,2.13678724400706,3.4206261464251,2.14461159864296,3.98235415019888,1.21390318077491,0.604647113929502,2.26326095707078,3.2483208216885,1.53717573971964,2.32585463851399,2.54473610634254,2.13898427030833,0.948110273807448,1.05418608574999,5.15677716240934,1.70219802876894,1.08036656418786,1.29358683782755,1.71469628025274,3.01478397191865,1.96205699362278,2.46823530903181,1.8267896946876,4.22409074514679,2.96564899209348,2.64634077665954,2.63818004706368,0.645857706783622,1.26657142349127,1.07435109602823,1.14898629821543,1.7488850197791,0.741701208042039,7.86006051670122,1.857481811669,2.59272338317596,4.70921142511728,3.55404992074665,5.0331198105435,0.169978429993855,0.559805809294632,0.552799895217695,1.90934123603023,2.37251995185852,1.42323626988794,2.48412283890143,1.67270636811575,0.655087691238533,1.48350781023303,2.0663363931334,2.09404753587224,0.90730481304255,4.97071450469541,0.56369293868419,1.04661582230785,1.65458490457098,1.36115831840833,2.19571699912143,2.70329800785245,1.99507305697782,1.17183946359555,1.15345278868282,0.241584120826006,0,3.16011120628178,1.21635129174099,0.924398614483445,1.94881234466693,0.716106782669926,2.58285761215644,1.9231271923195,2.51072196196781,2.01932899896295,2.057583779685,2.41982844328417,4.0932309910696,2.98256709085021,3.3894301632655,2.72076460338254,0.443971906748129,1.25599399253266,1.00730769818447,3.86379188064381,3.56596703357246,3.11357761254351,0.643105137237198,2.50786052017682,0,0.920650473014354,1.71868654031819,0.171853182343688,0,0,0,0,0,0.51776031175182,1.66059756134683,0.399024873401031,1.36586884603307,1.70174701947806,2.30574478890781,2.5738091183002,2.889207461421,1.85431551515005,2.88827288632634,2.27427490587418,2.28131369901216,2.82939512079114,1.96647165686753,2.62503124859964,2.23998328926892,0.952587382566147,1.50649623728312,2.12200142510076,2.06042950401653,3.23837624295674,3.42869252385415,2.66213709239006,3.33810665926249,2.0348498328526,2.4468438907986,2.19997980518359,2.92684756596436,1.05227884575137,1.90125759384206,3.36685362994643,2.01679530811096,1.57607171800902,2.45538625901814,1.70430525304563,2.70069255373598,0.749431733813838,2.57324769289949,1.71896843238639,1.72159498861959,2.64709702943419,0.695603506861264|short_description=p3@Trim56}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=384309
|HGNC=
|TSSclassifier=NA
|UniProt=D3YVX5
|association_with_transcript=-12bp_to_ENSMUST00000152207_5end
|cluster_id=chr5:137592091..137592111,-
|description=CAGE_peak_3_at_Trim56_5end
|id=chr5:137592091..137592111,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!7.29e-10!193;UBERON:0004120!7.29e-10!193;UBERON:0006603!7.29e-10!193;UBERON:0003104!5.62e-09!131;UBERON:0009142!5.62e-09!131;UBERON:0000077!3.27e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0002100,8.08e-07,90
|phase1_expression=1.60148847104794,1.74487703819681,0.454999239389536,0.60492842261366,3.00537437967808,1.17515490338323,0.934450562382103,1.03298658753261,0.281577444303333,1.17032263160997,1.19852577757853,0.797721589953364,1.71200729931206,1.48614684112296,4.99664642723494,8.70643649776252,5.59649502502517,1.41957974411207,1.23402990245165,2.54633791078818,2.55129870453209,0.496454756004426,0.783599367416806,1.11994695955385,0.68822784320151,0.57423196411502,0.430761996159075,0.861884930743556,1.14014051673824,0.252030129759931,1.10865255327652,0,3.07532393792285,0,0,0.498703936075477,0.408338712524738,0.837063261473815,1.5626706890476,1.0470474879476,0,2.73218193983378,0.485510353031154,3.14742044938943,2.43304634926835,2.0190142737785,4.69434806608824,2.39827672018491,1.75748946187577,2.13872888981712,1.95980990275508,1.43752564364972,1.00669563634642,0.725362142011344,2.68875039313971,5.14518872071894,3.43840127926508,5.15672092277442,0.809265843438391,1.05798195854407,0.633831403506179,1.35537812827653,0.889294796111139,1.7997994345628,0,2.8419204597844,2.39680088414724,3.07374644257244,0.933206510776299,0.675029691658453,0.420649922702764,0.571301968807607,1.32521124570968,1.10241719293459,0.958454710182364,2.75765635983006,1.10115880999389,1.0214987046815,0.46081959976873,0.131886287730194,0.274462930807229,1.04182674111352,0.837548997004143,1.12552522006336,1.22238598221448,2.06240009831567,0.711858403995515,0.372798891650601,3.40767869999328,3.55186332501892,4.34796733052517,0.860423876981386,0,1.07940638327563,1.29955283489534,0.448026887097336,2.94933282276679,1.87473354835864,3.11743205523443,5.3000936176551,2.25349471642689,3.84979432242953,10.1922095882658,7.11066703153331,2.38140145112336,2.02687892380079,7.58286667522175,1.25602267690966,1.55362730188303,3.85949561568544,1.04091196059682,2.13125834818499,1.61430848079241,2.41156224884196,2.3517741427141,2.01066546127481,3.21353458054686,2.16899035379867,0,1.13236794963186,2.20841518460394,4.84875253135222,0,0,0.41889341362691,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,1.04853447583376,0,0.251308704225729,0.521472960576829,0.255715457330331,0.62336413367868,0,2.24046600470696,2.48813941220186,1.26361379216837,2.31486041475121,1.43132487258974,0.459804208866946,1.80062129805349,1.05493372485001,1.63287597963187,1.0249097622788,1.59292931751539,1.03481348295606,1.5089759505299,0.567318240503458,1.05570674498369,1.7535658594206,1.11218899690239,2.43776516565517,2.05782136407943,1.59227413454795,0,0.257347907114715,0.284163499395593,2.07125772535502,1.64168241986767,1.80062061461015,2.13070262026689,1.37734962223183,2.1597395804233,1.39520366850245,1.3413670069981,1.5179494507732,1.6455984991348,1.47750717671186,1.37816976227955,1.46199987425332,1.3173006917463,0.939444931322602,0.841159794256509,0.205809224758569,0.330418782983798,0.793351699990633,1.70630600428187,0.928946687441754,1.15980715189884,1.21010114774006,2.44615848229357,1.52180500890047,0.474529061544512,0.494096864172033,1.75934646160189,1.39269530428806,0.779856348476481,0.898819408654221,0.648414149624083,0.597423819763102,0.569003702859245,1.48523066392647,3.38123207019241,1.4255592949172,1.74557238450863,1.61312385747733,2.21327879934901,2.80459281161244,2.19798218977925,1.85095745882701,1.48226313543574,2.50267658574141,2.55526693647164,3.14806957338795,6.08580364165509,5.30589751455317,6.11102044275408,4.31544206176216,1.45921704097532,1.92192989231657,0,1.86070473834252,2.18426371180192,1.01031551178845,1.25578189465339,0.964887042726734,3.14080423283228,0.947457058852424,1.95557971730431,3.22515662972857,2.81628297946203,2.51259386162724,4.04674189506223,1.36593553500459,2.36452716159286,1.7717175171902,2.71073106717728,2.29408640602033,3.7990696010497,1.15719246865209,3.01582567878545,1.63171705145613,3.44234991113325,1.10374698521893,0.80275294993896,0.117211686592203,1.47541450839008,0.504941854408746,2.2085575359138,3.12350995437311,2.80050417052639,3.34556317133573,4.67877215573028,3.11384183867716,4.04810701674894,3.50707029493574,3.16230222357219,0.321321316421807,2.83880170416537,2.13678724400706,3.4206261464251,2.14461159864296,3.98235415019888,1.21390318077491,0.604647113929502,2.26326095707078,3.2483208216885,1.53717573971964,2.32585463851399,2.54473610634254,2.13898427030833,0.948110273807448,1.05418608574999,5.15677716240934,1.70219802876894,1.08036656418786,1.29358683782755,1.71469628025274,3.01478397191865,1.96205699362278,2.46823530903181,1.8267896946876,4.22409074514679,2.96564899209348,2.64634077665954,2.63818004706368,0.645857706783622,1.26657142349127,1.07435109602823,1.14898629821543,1.7488850197791,0.741701208042039,7.86006051670122,1.857481811669,2.59272338317596,4.70921142511728,3.55404992074665,5.0331198105435,0.169978429993855,0.559805809294632,0.552799895217695,1.90934123603023,2.37251995185852,1.42323626988794,2.48412283890143,1.67270636811575,0.655087691238533,1.48350781023303,2.0663363931334,2.09404753587224,0.90730481304255,4.97071450469541,0.56369293868419,1.04661582230785,1.65458490457098,1.36115831840833,2.19571699912143,2.70329800785245,1.99507305697782,1.17183946359555,1.15345278868282,0.241584120826006,0,3.16011120628178,1.21635129174099,0.924398614483445,1.94881234466693,0.716106782669926,2.58285761215644,1.9231271923195,2.51072196196781,2.01932899896295,2.057583779685,2.41982844328417,4.0932309910696,2.98256709085021,3.3894301632655,2.72076460338254,0.443971906748129,1.25599399253266,1.00730769818447,3.86379188064381,3.56596703357246,3.11357761254351,0.643105137237198,2.50786052017682,0,0.920650473014354,1.71868654031819,0.171853182343688,0,0,0,0,0,0.51776031175182,1.66059756134683,0.399024873401031,1.36586884603307,1.70174701947806,2.30574478890781,2.5738091183002,2.889207461421,1.85431551515005,2.88827288632634,2.27427490587418,2.28131369901216,2.82939512079114,1.96647165686753,2.62503124859964,2.23998328926892,0.952587382566147,1.50649623728312,2.12200142510076,2.06042950401653,3.23837624295674,3.42869252385415,2.66213709239006,3.33810665926249,2.0348498328526,2.4468438907986,2.19997980518359,2.92684756596436,1.05227884575137,1.90125759384206,3.36685362994643,2.01679530811096,1.57607171800902,2.45538625901814,1.70430525304563,2.70069255373598,0.749431733813838,2.57324769289949,1.71896843238639,1.72159498861959,2.64709702943419,0.695603506861264
|short_description=p3@Trim56
}}

Latest revision as of 14:26, 25 September 2015

Short description:p3@Trim56
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Trim56_5end
Coexpression cluster:NA
Association with transcript: -12bp_to_ENSMUST00000152207_5end
EntrezGene:Trim56
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Trim56

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.71
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D93.41
Mouse Schwann, donor2.CNhs12573.11746-123F93.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D52.21
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D76.09
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A36.11
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G27.86
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H13.55
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D42.48
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.02
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E42.42
thymus, neonate N20.CNhs11186.820-7A24.09
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G23.39
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk8.08e-0790
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:137592091..137592111,-&oldid=4196378"