FFCP PHASE1:Hg19::chr9:103189660..103189693,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91283 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23370 | |||
|TSSclassifier=strong | |||
|UniProt=Q96H12 | |||
|association_with_transcript=-17bp_to_NM_001198805_5end | |||
|cluster_id=chr9:103189660..103189693,+ | |||
|description=CAGE_peak_5_at_C9orf30_5end | |||
|id=chr9:103189660..103189693,+ | |||
|ontology_enrichment_celltype=CL:0000220!2.70e-21!246;CL:0002321!6.35e-21!248;CL:0000066!2.51e-19!254;CL:0000222!5.64e-13!119;CL:0000213!3.54e-08!57;CL:0000215!3.54e-08!57;CL:0000076!4.46e-07!62 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.19e-21,250;CL:0000066,5.45e-19,253;CL:0000222,5.02e-13,121;CL:0000213,1.43e-08,58;CL:0000215,1.43e-08,58;CL:0002078,7.31e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.78e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.57e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.96e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000119!2.82e-14!312;UBERON:0000483!8.71e-14!309;UBERON:0004111!1.55e-13!241;UBERON:0000481!3.82e-13!347;UBERON:0000475!3.12e-12!365;UBERON:0000477!5.06e-12!286;UBERON:0000490!2.54e-10!138;UBERON:0003914!3.04e-10!118;UBERON:0002100!1.38e-09!216;UBERON:0000480!1.73e-09!626;UBERON:0000467!2.11e-09!625;UBERON:0000025!3.23e-09!194;UBERON:0005256!6.69e-09!143;UBERON:0000055!1.35e-08!69;UBERON:0003104!1.57e-08!238;UBERON:0009142!1.57e-08!238;UBERON:0002049!4.92e-08!79;UBERON:0007798!4.92e-08!79;UBERON:0004119!1.47e-07!169;UBERON:0000925!1.47e-07!169;UBERON:0006595!1.47e-07!169;UBERON:0001048!1.95e-07!168;UBERON:0004535!5.29e-07!110;UBERON:0004872!7.38e-07!84;UBERON:0000064!7.52e-07!219;UBERON:0001981!7.79e-07!60;UBERON:0007500!7.79e-07!60;UBERON:0004537!7.79e-07!60;UBERON:0006965!7.79e-07!60 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,5.28e-14,309;UBERON:0000483,1.62e-13,306;UBERON:0004111,1.93e-13,240;UBERON:0003914,2.59e-10,117;UBERON:0000490,1.07e-09,148;UBERON:0000025,3.43e-09,192;UBERON:0002100,1.68e-08,199;UBERON:0000055,3.91e-08,68;UBERON:0002049,1.38e-07,78;UBERON:0007798,1.38e-07,78;UBERON:0004535,9.81e-07,109 | |||
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| |||
|short_description=p5@C9orf30 | |||
}} |
Latest revision as of 20:58, 19 September 2015
Short description: | p5@C9orf30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C9orf30_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_NM_001198805_5end |
EntrezGene: | C9orf30 |
HGNC: | 23370 |
UniProt: | Q96H12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.19e-21 | 250 |
epithelial cell | 5.45e-19 | 253 |
mesodermal cell | 5.02e-13 | 121 |
lining cell | 1.43e-08 | 58 |
barrier cell | 1.43e-08 | 58 |
meso-epithelial cell | 7.31e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
cell layer | 5.28e-14 | 309 |
epithelium | 1.62e-13 | 306 |
anatomical conduit | 1.93e-13 | 240 |
epithelial tube | 2.59e-10 | 117 |
unilaminar epithelium | 1.07e-09 | 148 |
tube | 3.43e-09 | 192 |
trunk | 1.68e-08 | 199 |
vessel | 3.91e-08 | 68 |
vasculature | 1.38e-07 | 78 |
vascular system | 1.38e-07 | 78 |
cardiovascular system | 9.81e-07 | 109 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.96e-07 | 14 |