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FFCP PHASE1:Mm9::chr5:123582413..123582443,-: Difference between revisions

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{{FFCP|EntrezGene=23912|HGNC=|MCL_coexpression_id=1635|UniProt=|association_with_transcript=0bp_to_ENSMUST00000162208_5end|description=CAGE_peak_2_at_Rhof_5end|id=chr5:123582413..123582443,-|ontology_enrichment_celltype=CL:0000838!2.05e-07!12;CL:0000084!6.00e-07!11;CL:0000827!6.00e-07!11;CL:0000791!8.86e-07!9;CL:0000789!8.86e-07!9;CL:0002420!8.86e-07!9;CL:0002419!8.86e-07!9;CL:0000790!8.86e-07!9|ontology_enrichment_celltype_v019_2=CL:0000838,1.42e-07,12;CL:0000084,4.29e-07,11;CL:0000827,4.29e-07,11;CL:0000791,6.39e-07,9;CL:0000789,6.39e-07,9;CL:0002420,6.39e-07,9;CL:0002419,6.39e-07,9;CL:0000790,6.39e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000064!7.81e-13!99;UBERON:0001049!3.08e-10!52;UBERON:0005068!3.08e-10!52;UBERON:0006241!3.08e-10!52;UBERON:0007135!3.08e-10!52;UBERON:0000955!1.46e-09!50;UBERON:0006238!1.46e-09!50;UBERON:0002616!2.94e-09!49;UBERON:0002020!1.91e-08!34;UBERON:0007811!2.84e-08!86;UBERON:0000153!2.08e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.92e-11,54;UBERON:0001049,4.19e-10,52;UBERON:0005068,4.19e-10,52;UBERON:0006241,4.19e-10,52;UBERON:0007135,4.19e-10,52;UBERON:0002020,1.24e-08,34;UBERON:0000955,4.02e-08,47;UBERON:0006238,4.02e-08,47;UBERON:0002616,7.93e-08,46;UBERON:0011216,2.77e-07,194;UBERON:0003528,9.78e-07,29;UBERON:0002791,9.78e-07,29;UBERON:0001893,9.78e-07,29|phase1_expression=0.960893082628764,98.4110649542998,80.5348653719479,27.5242432289215,24.0429950374247,18.8024784541317,26.8654536684855,46.8717664092922,111.223090499817,108.371875687083,65.0628279256919,64.9345374222038,38.1777627746589,43.7976216119177,7.66152452176024,10.7311891716608,3.49780939064073,41.3255436619291,42.3683599841733,41.1657962244089,6.54833334163237,7.4468213400664,7.83599367416806,36.1582875513099,36.9348942518144,47.6612530215467,40.491627638953,48.9119698196968,18.2422482678119,8.31699428207772,26.3859307679813,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.408338712524738,29.7157457823205,12.5013655123808,17.2762835511353,31.7645003536748,21.1744100337118,23.7900072985265,0.251793635951155,0.101376931219515,0.917733760808408,5.47673941043627,2.39827672018491,3.07560655828261,1.36100929351998,4.75953833526233,5.75010257459886,29.5297386661616,23.9369506863744,22.1821907434026,0,0.286533439938757,0.515672092277442,1.82084814773638,8.99284664762456,9.50747105259269,3.38844532069132,5.33576877666684,1.3498495759221,3.9554654502679,1.4209602298922,3.59520132622086,0,2.07379224616955,2.16009501330705,1.89292465216244,31.992910253226,29.8172530284678,2.57230678351403,1.62937300731002,3.67687514644008,38.540558349786,23.3667828695894,30.26048705148,2.76961204233407,2.8361169516747,2.6045668527838,31.2684958881547,21.3849791812038,23.5309301576288,26.2219441071564,21.7828671622628,8.01517617048792,1.28734528666413,0.604572480854284,0,0,0,0.539703191637817,0,0.448026887097336,5.75822122540183,0.170430322578058,0,0,0.845060518660083,0,0,0,1.73192832808971,1.77351905832569,1.01104889002957,6.73684890342454,30.2957323867191,2.67195850316685,0.867426633830679,0.913396434936424,0.922461989024234,0.753613202763113,0.705532242814229,0.502666365318702,2.47194967734374,1.59059292611903,9.73071607144862,3.07357014900077,3.5334642953663,4.84875253135222,14.9113408974498,15.517382241612,10.8912287542997,17.3710797541842,3.35482348616577,1.19980546198682,2.66847476853436,33.4033125872755,27.4500361691176,10.8062742817063,33.8957424374939,25.5715457330331,27.8435979709811,24.8229132493669,1.12023300235348,5.97153458928446,2.0217820674694,1.68353484709179,0.650602214813519,1.60931473103431,1.0803727788321,0.452114453507145,0.816437989815934,0.384341160854549,1.12442069471675,3.10444044886819,1.94011193639558,0.567318240503458,0.879755620819744,1.7535658594206,1.11218899690239,1.39300866608867,1.85203922767149,0.796137067273973,0,0.51469581422943,1.70498099637356,0.207125772535502,0.234526059981096,0.720248245844059,1.18372367792605,0.983821158737019,0.154267112887378,0.232533944750408,1.3413670069981,0.467061369468678,0.329119699826961,0.656669856316381,0.56748166682099,0,0.439100230582101,0,21.449574753541,4.6307075570678,53.5278428433753,31.9985185662889,0.426576501070468,0.232236671860439,1.28867461322093,0.201683524623343,0.444756087689741,0.951128130562796,11.3886974770683,11.1995289212327,6.78605063760728,4.97391180102877,5.06906626509712,10.7858329038507,11.6714546932335,12.1476176685164,0.758671603812327,1.02823661348756,0,0.203651327845314,1.55161989734101,1.33258057791605,1.20149420536089,5.01874503130647,5.33795674660674,5.79966670432462,0.592905254174298,1.50160595144485,0.982794975566015,1.34917267430912,1.62288097110802,0.72353147925725,1.52775511068852,1.72617682470486,1.13494658742525,1.37280706594041,0,2.97712758134803,0.312037673114561,0,0.179397413521912,0,5.91210208533135,0.189491411770485,0.488894929326078,1.01847051465113,0.704070744865506,6.365237782789,5.71304738126433,3.70753930929818,2.67979744980525,3.1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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=23912
|HGNC=
|MCL_coexpression_id=1635
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000162208_5end
|cluster_id=chr5:123582413..123582443,-
|description=CAGE_peak_2_at_Rhof_5end
|id=chr5:123582413..123582443,-
|ontology_enrichment_celltype=CL:0000838!2.05e-07!12;CL:0000084!6.00e-07!11;CL:0000827!6.00e-07!11;CL:0000791!8.86e-07!9;CL:0000789!8.86e-07!9;CL:0002420!8.86e-07!9;CL:0002419!8.86e-07!9;CL:0000790!8.86e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000838,1.42e-07,12;CL:0000084,4.29e-07,11;CL:0000827,4.29e-07,11;CL:0000791,6.39e-07,9;CL:0000789,6.39e-07,9;CL:0002420,6.39e-07,9;CL:0002419,6.39e-07,9;CL:0000790,6.39e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000064!7.81e-13!99;UBERON:0001049!3.08e-10!52;UBERON:0005068!3.08e-10!52;UBERON:0006241!3.08e-10!52;UBERON:0007135!3.08e-10!52;UBERON:0000955!1.46e-09!50;UBERON:0006238!1.46e-09!50;UBERON:0002616!2.94e-09!49;UBERON:0002020!1.91e-08!34;UBERON:0007811!2.84e-08!86;UBERON:0000153!2.08e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.92e-11,54;UBERON:0001049,4.19e-10,52;UBERON:0005068,4.19e-10,52;UBERON:0006241,4.19e-10,52;UBERON:0007135,4.19e-10,52;UBERON:0002020,1.24e-08,34;UBERON:0000955,4.02e-08,47;UBERON:0006238,4.02e-08,47;UBERON:0002616,7.93e-08,46;UBERON:0011216,2.77e-07,194;UBERON:0003528,9.78e-07,29;UBERON:0002791,9.78e-07,29;UBERON:0001893,9.78e-07,29
|phase1_expression=0.960893082628764,98.4110649542998,80.5348653719479,27.5242432289215,24.0429950374247,18.8024784541317,26.8654536684855,46.8717664092922,111.223090499817,108.371875687083,65.0628279256919,64.9345374222038,38.1777627746589,43.7976216119177,7.66152452176024,10.7311891716608,3.49780939064073,41.3255436619291,42.3683599841733,41.1657962244089,6.54833334163237,7.4468213400664,7.83599367416806,36.1582875513099,36.9348942518144,47.6612530215467,40.491627638953,48.9119698196968,18.2422482678119,8.31699428207772,26.3859307679813,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.408338712524738,29.7157457823205,12.5013655123808,17.2762835511353,31.7645003536748,21.1744100337118,23.7900072985265,0.251793635951155,0.101376931219515,0.917733760808408,5.47673941043627,2.39827672018491,3.07560655828261,1.36100929351998,4.75953833526233,5.75010257459886,29.5297386661616,23.9369506863744,22.1821907434026,0,0.286533439938757,0.515672092277442,1.82084814773638,8.99284664762456,9.50747105259269,3.38844532069132,5.33576877666684,1.3498495759221,3.9554654502679,1.4209602298922,3.59520132622086,0,2.07379224616955,2.16009501330705,1.89292465216244,31.992910253226,29.8172530284678,2.57230678351403,1.62937300731002,3.67687514644008,38.540558349786,23.3667828695894,30.26048705148,2.76961204233407,2.8361169516747,2.6045668527838,31.2684958881547,21.3849791812038,23.5309301576288,26.2219441071564,21.7828671622628,8.01517617048792,1.28734528666413,0.604572480854284,0,0,0,0.539703191637817,0,0.448026887097336,5.75822122540183,0.170430322578058,0,0,0.845060518660083,0,0,0,1.73192832808971,1.77351905832569,1.01104889002957,6.73684890342454,30.2957323867191,2.67195850316685,0.867426633830679,0.913396434936424,0.922461989024234,0.753613202763113,0.705532242814229,0.502666365318702,2.47194967734374,1.59059292611903,9.73071607144862,3.07357014900077,3.5334642953663,4.84875253135222,14.9113408974498,15.517382241612,10.8912287542997,17.3710797541842,3.35482348616577,1.19980546198682,2.66847476853436,33.4033125872755,27.4500361691176,10.8062742817063,33.8957424374939,25.5715457330331,27.8435979709811,24.8229132493669,1.12023300235348,5.97153458928446,2.0217820674694,1.68353484709179,0.650602214813519,1.60931473103431,1.0803727788321,0.452114453507145,0.816437989815934,0.384341160854549,1.12442069471675,3.10444044886819,1.94011193639558,0.567318240503458,0.879755620819744,1.7535658594206,1.11218899690239,1.39300866608867,1.85203922767149,0.796137067273973,0,0.51469581422943,1.70498099637356,0.207125772535502,0.234526059981096,0.720248245844059,1.18372367792605,0.983821158737019,0.154267112887378,0.232533944750408,1.3413670069981,0.467061369468678,0.329119699826961,0.656669856316381,0.56748166682099,0,0.439100230582101,0,21.449574753541,4.6307075570678,53.5278428433753,31.9985185662889,0.426576501070468,0.232236671860439,1.28867461322093,0.201683524623343,0.444756087689741,0.951128130562796,11.3886974770683,11.1995289212327,6.78605063760728,4.97391180102877,5.06906626509712,10.7858329038507,11.6714546932335,12.1476176685164,0.758671603812327,1.02823661348756,0,0.203651327845314,1.55161989734101,1.33258057791605,1.20149420536089,5.01874503130647,5.33795674660674,5.79966670432462,0.592905254174298,1.50160595144485,0.982794975566015,1.34917267430912,1.62288097110802,0.72353147925725,1.52775511068852,1.72617682470486,1.13494658742525,1.37280706594041,0,2.97712758134803,0.312037673114561,0,0.179397413521912,0,5.91210208533135,0.189491411770485,0.488894929326078,1.01847051465113,0.704070744865506,6.365237782789,5.71304738126433,3.70753930929818,2.67979744980525,3.10050565508285,3.18909537314974,5.40748938561935,6.56202931090403,5.64131328467895,0,5.4390568381871,1.96705709207614,0.827810238914197,31.1468144576316,27.3103229759833,0.327869890753351,1.51482556322624,0,0.390438744296638,0.861693590931196,0.238968797952552,0.445597348164788,0.566153061577665,0,0.292255857911312,0,15.1021018718249,0.851640511249612,1.24645922567079,0.488660878060728,0.659880491890142,1.32745138339963,0,0,0.943025398779491,0.295301892880773,0.307435147943927,5.68542244970086,0.363533729477506,0,0.316036757935816,0,0,6.46835250932197,0.900305470156551,1.4229455216103,1.28602221018955,0.886701168211368,3.21063871683727,3.78462747384878,3.65357938937519,4.4587624532105,5.08396970073168,0.220528398054962,1.48397627647332,3.06782410722221,1.14594557363496,1.79058516004705,0.492422699235184,14.2825609948627,28.9263471136395,14.3531539870196,1.857481811669,2.77791791054568,4.33247451110789,8.74843057414561,11.4389086603261,17.3377998593732,10.7762618289217,16.4457968827264,30.5494597764836,1.26534397432454,0.203319467126849,0.756037385752609,1.04544148007234,6.33251434863915,6.20375993370175,6.86023682520288,16.2288684030098,19.3126310204771,1.86401793926078,0,0.598066184175915,0.66183396182839,1.55560950675238,1.03327858782185,1.01373675294467,0.821500670520278,1.17183946359555,1.15345278868282,0,0.864090018773596,11.0603892219862,2.63542779877213,1.02710957164827,2.20865399062252,1.61124026100733,3.57626438606277,4.68762253127878,5.31682297828478,4.64445669761479,5.10585604588499,6.15039729334727,10.0381617161945,8.56285390598932,12.5058285334279,4.30787728868902,1.10992976687032,0.62799699626633,0.671538465456314,0.772758376128762,8.07034644440082,2.56412273974171,1.07184189539533,0.501572104035363,34.4498623996411,25.3178880078947,28.6447756719698,17.8727309637435,30.1436308699083,37.769694869485,26.3258775090404,30.621841819247,29.9073989929575,33.6544202638683,0.207574695168353,1.19707462020309,1.87806966329548,1.45864030240976,3.14419743941973,1.2869045591501,2.00022055021454,2.06035057238894,3.53011130550997,2.27427490587418,1.2673964994512,3.58390048633545,1.68554713445788,2.88113185821912,2.46972516509137,2.85776214769844,1.50649623728312,2.50781986602817,3.29668720642645,2.35518272215036,4.4573002810104,3.90446773550542,3.33810665926249,2.18019624948493,2.07040636913727,2.62305284464197,3.10977553883713,1.05227884575137,2.98769050460896,1.68342681497322,2.25406534435931,2.65962102414021,2.45538625901814,1.54936841185966,2.12197272079256,5.24602213669686,2.57324769289949,2.57845264857958,3.63447830930802,2.8676884485537,2.55054619182464
|short_description=p2@Rhof
}}

Latest revision as of 20:46, 1 October 2015

Short description:p2@Rhof
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rhof_5end
Coexpression cluster:MCL_coexpression_mm9:1635
Association with transcript: 0bp_to_ENSMUST00000162208_5end
EntrezGene:Rhof
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rhof

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I598.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I680.53
CD326+ enterocyte, pool1.CNhs13542.11848-124I327.52
CD326+ enterocyte, pool2.CNhs13197.11849-124I424.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.80
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I826.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E946.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7111.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2108.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E665.06
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F164.93
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E438.18
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E843.80
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.73
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A241.33
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A442.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A641.17
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D136.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D236.93
GP2+ M cell, pool1.CNhs13228.11845-124H947.66
GP2+ M cell, pool2.CNhs13231.11846-124I140.49
GP2+ M cell, pool3.CNhs13240.11847-124I248.91
Ileum epithelium, pool1.CNhs13199.10252-104B918.24
Ileum epithelium, pool2.CNhs13232.10253-104C18.32
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C826.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G829.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H112.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G931.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H221.17
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H423.79
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A229.53
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.94
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A122.18
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F131.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D338.54
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F323.37
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D730.26
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E431.27
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D626.22
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.78
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.74
accessory axillary lymph node, adult.CNhs10475.1063-29H930.30
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F53.07
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B215.52
cerebellum, neonate N30.CNhs11135.1395-42I210.89
colon, adult.CNhs10468.36-18H717.37
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.67
corpora quadrigemina, adult.CNhs10501.16-22A433.40
corpus striatum, adult.CNhs10487.19-21D827.45
corpus striatum, neonate N00.CNhs11226.630-43F110.81
cortex, adult.CNhs10473.12-14D533.90
cortex, neonate N30.CNhs11107.1392-42F225.57
diencephalon, adult.CNhs10482.20-12F227.84
diencephalon, neonate N30.CNhs11201.1388-42B224.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.97
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E821.45
hippocampus, neonate N00.CNhs11228.627-43G14.63
intestinal mucosa, adult.CNhs10506.860-29I353.53
intestine, adult.CNhs10496.178-9A332.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D111.39
intestine, neonate N01.CNhs11192.1322-23E911.20
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F24.97
intestine, neonate N10.CNhs11098.755-23A55.07
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E311.67
intestine, neonate N30.CNhs11131.1384-42G112.15
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I15.02
kidney, neonate N25.CNhs11122.1353-25F35.34
kidney, neonate N30.CNhs11203.1385-42H15.80
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B15.91
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A45.41
lung, neonate N25.CNhs11119.1359-25C76.56
lung, neonate N30.CNhs11133.1394-42H25.64
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C231.15
medulla oblongata, neonate N30.CNhs11200.1396-42A327.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I915.10
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I114.28
spinal cord, adult.CNhs10505.24-13C928.93
spleen, adult.CNhs10465.25-2G214.35
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D14.33
spleen, neonate N20.CNhs11112.824-19H18.75
spleen, neonate N25.CNhs11099.1354-25G311.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D316.45
stomach, adult.CNhs10503.33-1H630.55
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B86.20
stomach, neonate N07.CNhs11210.718-18A96.86
stomach, neonate N25.CNhs11104.1355-25E416.23
stomach, neonate N30.CNhs11134.1386-42I119.31
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B511.06
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F84.69
thymus, neonate N03.CNhs11137.2104-43C75.32
thymus, neonate N06.CNhs11197.681-26C44.64
thymus, neonate N07.CNhs11211.713-19D35.11
thymus, neonate N10.CNhs11194.748-24E46.15
thymus, neonate N20.CNhs11186.820-7A210.04
thymus, neonate N25.CNhs11125.1362-25G78.56
thymus, neonate N30.CNhs11132.1393-42G212.51
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F58.07
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A134.45
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A225.32
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A430.14
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.77
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A626.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.65
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell1.42e-0712
T cell4.29e-0711
pro-T cell4.29e-0711
mature alpha-beta T cell6.39e-079
alpha-beta T cell6.39e-079
immature T cell6.39e-079
mature T cell6.39e-079
immature alpha-beta T cell6.39e-079

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.92e-1154
neural tube4.19e-1052
neural rod4.19e-1052
future spinal cord4.19e-1052
neural keel4.19e-1052
gray matter1.24e-0834
brain4.02e-0847
future brain4.02e-0847
regional part of brain7.93e-0846
organ system subdivision2.77e-07194
brain grey matter9.78e-0729
regional part of telencephalon9.78e-0729
telencephalon9.78e-0729
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