FFCP PHASE1:Mm9::chr5:117690882..117690900,+: Difference between revisions
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{{FFCP|EntrezGene=330177|HGNC=|MCL_coexpression_id=278|UniProt=Q3V3K3|association_with_transcript=-74bp_to_uc008zfk.2_5end|description=CAGE_peak_6_at_Taok3_5end|id=chr5:117690882..117690900,+|ontology_enrichment_celltype=CL:0000117!8.10e-11!23;CL:0000337!8.10e-11!23;CL:0002319!1.75e-08!43;CL:0000221!2.81e-08!44;CL:0000133!2.81e-08!44;CL:0000393!2.86e-08!39;CL:0000211!2.86e-08!39;CL:0000055!2.88e-08!50;CL:0000540!5.10e-08!33;CL:0000047!5.10e-08!33;CL:0000031!5.10e-08!33;CL:0000404!5.10e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.20e-16,23;CL:0000337,1.20e-16,23;CL:0000540,2.89e-11,33;CL:0000047,2.89e-11,33;CL:0000031,2.89e-11,33;CL:0000404,2.89e-11,33;CL:0000393,3.30e-11,39;CL:0000211,3.30e-11,39;CL:0002319,2.98e-09,43;CL:0000221,7.42e-09,44;CL:0000133,7.42e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.89e-27!73;UBERON:0005743!2.89e-27!73;UBERON:0000073!2.17e-26!75;UBERON:0001016!2.17e-26!75;UBERON:0001049!5.53e-25!52;UBERON:0005068!5.53e-25!52;UBERON:0006241!5.53e-25!52;UBERON:0007135!5.53e-25!52;UBERON:0000955!6.66e-24!50;UBERON:0006238!6.66e-24!50;UBERON:0002616!3.53e-23!49;UBERON:0002346!1.16e-21!71;UBERON:0003075!1.16e-21!71;UBERON:0007284!1.16e-21!71;UBERON:0000033!1.49e-20!63;UBERON:0003080!3.98e-19!40;UBERON:0004121!9.59e-19!102;UBERON:0000924!9.59e-19!102;UBERON:0006601!9.59e-19!102;UBERON:0002780!2.07e-18!39;UBERON:0001890!2.07e-18!39;UBERON:0006240!2.07e-18!39;UBERON:0003056!2.39e-18!49;UBERON:0002020!1.11e-16!34;UBERON:0007811!1.74e-14!86;UBERON:0002791!4.79e-14!29;UBERON:0003528!4.79e-14!29;UBERON:0001893!4.79e-14!29;UBERON:0000153!2.96e-13!94;UBERON:0000956!7.74e-10!21;UBERON:0001869!7.74e-10!21;UBERON:0000203!7.74e-10!21;UBERON:0000025!2.38e-09!114;UBERON:0004111!4.58e-08!122;UBERON:0002619!5.38e-08!17;UBERON:0002021!1.27e-07!10;UBERON:0000411!1.27e-07!10;UBERON:0001950!1.27e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.91e-37,54;UBERON:0001017,5.93e-36,73;UBERON:0001049,2.45e-35,52;UBERON:0005068,2.45e-35,52;UBERON:0006241,2.45e-35,52;UBERON:0007135,2.45e-35,52;UBERON:0001016,1.97e-34,75;UBERON:0000955,6.03e-31,47;UBERON:0006238,6.03e-31,47;UBERON:0002346,1.59e-30,64;UBERON:0003075,1.59e-30,64;UBERON:0007284,1.59e-30,64;UBERON:0002616,7.42e-30,46;UBERON:0003080,6.01e-28,40;UBERON:0002780,7.73e-27,39;UBERON:0001890,7.73e-27,39;UBERON:0006240,7.73e-27,39;UBERON:0004121,5.30e-26,95;UBERON:0000924,5.30e-26,95;UBERON:0006601,5.30e-26,95;UBERON:0002020,2.64e-25,34;UBERON:0010371,1.74e-24,73;UBERON:0003056,3.63e-24,49;UBERON:0003528,3.45e-21,29;UBERON:0002791,3.45e-21,29;UBERON:0001893,3.45e-21,29;UBERON:0010314,3.01e-17,92;UBERON:0000956,1.27e-14,21;UBERON:0001869,1.27e-14,21;UBERON:0000203,1.27e-14,21;UBERON:0000025,2.11e-13,114;UBERON:0004111,6.38e-12,122;UBERON:0002619,9.37e-12,17;UBERON:0002021,5.29e-11,10;UBERON:0000411,5.29e-11,10;UBERON:0001950,5.29e-11,10;UBERON:0011216,1.63e-08,194;UBERON:0002420,9.12e-08,8;UBERON:0007245,9.12e-08,8;UBERON:0010009,9.12e-08,8;UBERON:0010011,9.12e-08,8;UBERON:0000454,9.12e-08,8;UBERON:0003076,1.21e-07,12;UBERON:0003057,1.21e-07,12|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.42438965179803,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,1.82478476195126,1.28482726513177,0.782391344348039,0.436050312760893,1.31811709640683,0.388859798148567,1.67983705950435,1.43752564364972,0,0,0,0.514518872071894,0,0.515672092277442,3.43937983461316,6.87688273053643,3.80298842103708,0.338844532069132,4.4464739805557,0,0,0,0.898800331555214,0.768436610643109,2.17748185847803,1.62007125998029,2.3135745748652,2.28520787523043,5.30084498283872,1.5923803897944,1.34183659425531,0,3.30347642998166,3.31987079021488,3.22573719838111,5.01167893374737,2.65314166446988,2.6045668527838,1.67509799400829,3.37657566019008,3.81995619442025,2.06240009831567,3.13217697758026,3.35519002485541,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,0,2.55645483867087,1.55871602761721,0.35333957451034,0.281686839553361,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.346970653532272,0,0,0.904335843315735,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0.647067399789637,0.883366073841574,0,0,4.39171195517321,3.14170060220183,0,0,0,0,5.84183493678809,2.74500361691176,5.02617408451458,6.25767552692195,4.85859368927628,3.32460871295296,3.56930778749067,0.407357455401265,0.497627882440372,0.252722758433675,0,0.260240885925407,0.229902104433473,1.0803727788321,0.60281927134286,0.884474488967262,1.7935920839879,0.937017245597288,2.32833033665114,0,0.756424320671277,0.527853372491847,0.219195732427575,0.556094498451196,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0,0.828503090142008,1.17263029990548,0.36012412292203,0.23674473558521,0.787056926989615,1.07986979021165,0.465067889500816,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0.43910023058210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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330177 | |||
|HGNC= | |||
|MCL_coexpression_id=278 | |||
|TSSclassifier=NA | |||
|UniProt=Q3V3K3 | |||
|association_with_transcript=-74bp_to_uc008zfk.2_5end | |||
|cluster_id=chr5:117690882..117690900,+ | |||
|description=CAGE_peak_6_at_Taok3_5end | |||
|id=chr5:117690882..117690900,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.10e-11!23;CL:0000337!8.10e-11!23;CL:0002319!1.75e-08!43;CL:0000221!2.81e-08!44;CL:0000133!2.81e-08!44;CL:0000393!2.86e-08!39;CL:0000211!2.86e-08!39;CL:0000055!2.88e-08!50;CL:0000540!5.10e-08!33;CL:0000047!5.10e-08!33;CL:0000031!5.10e-08!33;CL:0000404!5.10e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.20e-16,23;CL:0000337,1.20e-16,23;CL:0000540,2.89e-11,33;CL:0000047,2.89e-11,33;CL:0000031,2.89e-11,33;CL:0000404,2.89e-11,33;CL:0000393,3.30e-11,39;CL:0000211,3.30e-11,39;CL:0002319,2.98e-09,43;CL:0000221,7.42e-09,44;CL:0000133,7.42e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.89e-27!73;UBERON:0005743!2.89e-27!73;UBERON:0000073!2.17e-26!75;UBERON:0001016!2.17e-26!75;UBERON:0001049!5.53e-25!52;UBERON:0005068!5.53e-25!52;UBERON:0006241!5.53e-25!52;UBERON:0007135!5.53e-25!52;UBERON:0000955!6.66e-24!50;UBERON:0006238!6.66e-24!50;UBERON:0002616!3.53e-23!49;UBERON:0002346!1.16e-21!71;UBERON:0003075!1.16e-21!71;UBERON:0007284!1.16e-21!71;UBERON:0000033!1.49e-20!63;UBERON:0003080!3.98e-19!40;UBERON:0004121!9.59e-19!102;UBERON:0000924!9.59e-19!102;UBERON:0006601!9.59e-19!102;UBERON:0002780!2.07e-18!39;UBERON:0001890!2.07e-18!39;UBERON:0006240!2.07e-18!39;UBERON:0003056!2.39e-18!49;UBERON:0002020!1.11e-16!34;UBERON:0007811!1.74e-14!86;UBERON:0002791!4.79e-14!29;UBERON:0003528!4.79e-14!29;UBERON:0001893!4.79e-14!29;UBERON:0000153!2.96e-13!94;UBERON:0000956!7.74e-10!21;UBERON:0001869!7.74e-10!21;UBERON:0000203!7.74e-10!21;UBERON:0000025!2.38e-09!114;UBERON:0004111!4.58e-08!122;UBERON:0002619!5.38e-08!17;UBERON:0002021!1.27e-07!10;UBERON:0000411!1.27e-07!10;UBERON:0001950!1.27e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.91e-37,54;UBERON:0001017,5.93e-36,73;UBERON:0001049,2.45e-35,52;UBERON:0005068,2.45e-35,52;UBERON:0006241,2.45e-35,52;UBERON:0007135,2.45e-35,52;UBERON:0001016,1.97e-34,75;UBERON:0000955,6.03e-31,47;UBERON:0006238,6.03e-31,47;UBERON:0002346,1.59e-30,64;UBERON:0003075,1.59e-30,64;UBERON:0007284,1.59e-30,64;UBERON:0002616,7.42e-30,46;UBERON:0003080,6.01e-28,40;UBERON:0002780,7.73e-27,39;UBERON:0001890,7.73e-27,39;UBERON:0006240,7.73e-27,39;UBERON:0004121,5.30e-26,95;UBERON:0000924,5.30e-26,95;UBERON:0006601,5.30e-26,95;UBERON:0002020,2.64e-25,34;UBERON:0010371,1.74e-24,73;UBERON:0003056,3.63e-24,49;UBERON:0003528,3.45e-21,29;UBERON:0002791,3.45e-21,29;UBERON:0001893,3.45e-21,29;UBERON:0010314,3.01e-17,92;UBERON:0000956,1.27e-14,21;UBERON:0001869,1.27e-14,21;UBERON:0000203,1.27e-14,21;UBERON:0000025,2.11e-13,114;UBERON:0004111,6.38e-12,122;UBERON:0002619,9.37e-12,17;UBERON:0002021,5.29e-11,10;UBERON:0000411,5.29e-11,10;UBERON:0001950,5.29e-11,10;UBERON:0011216,1.63e-08,194;UBERON:0002420,9.12e-08,8;UBERON:0007245,9.12e-08,8;UBERON:0010009,9.12e-08,8;UBERON:0010011,9.12e-08,8;UBERON:0000454,9.12e-08,8;UBERON:0003076,1.21e-07,12;UBERON:0003057,1.21e-07,12 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.42438965179803,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,1.82478476195126,1.28482726513177,0.782391344348039,0.436050312760893,1.31811709640683,0.388859798148567,1.67983705950435,1.43752564364972,0,0,0,0.514518872071894,0,0.515672092277442,3.43937983461316,6.87688273053643,3.80298842103708,0.338844532069132,4.4464739805557,0,0,0,0.898800331555214,0.768436610643109,2.17748185847803,1.62007125998029,2.3135745748652,2.28520787523043,5.30084498283872,1.5923803897944,1.34183659425531,0,3.30347642998166,3.31987079021488,3.22573719838111,5.01167893374737,2.65314166446988,2.6045668527838,1.67509799400829,3.37657566019008,3.81995619442025,2.06240009831567,3.13217697758026,3.35519002485541,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,0,2.55645483867087,1.55871602761721,0.35333957451034,0.281686839553361,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.346970653532272,0,0,0.904335843315735,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0.647067399789637,0.883366073841574,0,0,4.39171195517321,3.14170060220183,0,0,0,0,5.84183493678809,2.74500361691176,5.02617408451458,6.25767552692195,4.85859368927628,3.32460871295296,3.56930778749067,0.407357455401265,0.497627882440372,0.252722758433675,0,0.260240885925407,0.229902104433473,1.0803727788321,0.60281927134286,0.884474488967262,1.7935920839879,0.937017245597288,2.32833033665114,0,0.756424320671277,0.527853372491847,0.219195732427575,0.556094498451196,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0,0.828503090142008,1.17263029990548,0.36012412292203,0.23674473558521,0.787056926989615,1.07986979021165,0.465067889500816,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,6.9395683026162,3.49875682089567,0,0.264450566663544,0.213288250535234,1.39342003116263,1.15980715189884,0.201683524623343,0.889512175379481,0.380451252225118,0.474529061544512,0.329397909448022,0,0.596869416123452,0.779856348476481,0,0.216138049874694,0.199141273254367,0.379335801906163,0.685491075658373,1.1270773567308,0.203651327845314,0.193952487167626,0.210407459670956,0.316182685621286,0,0.627994911365499,0.123397163921801,0,0,0.786235980452812,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0.757965647081939,1.30371981153621,0.339490171550376,1.64283173801951,0.335012514883631,0.476087281772027,0,1.41871629695572,0.44292937929755,1.2756381492599,0,0.690739927463582,0.144649058581512,0,0,0,0,5.13761887960934,4.68846746368813,1.80328439914343,0.252470927204373,1.26203287766503,0.780877488593277,0.646270193198397,0,0.222798674082394,0,0,0.584511715822624,1.58115111178609,5.14114106274891,0.425820255624806,0.534196811001766,0.325773918707152,0.824850614862677,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0,0.775284879504663,0,0.356497378384721,0,1.05418608574999,0,13.2771446243977,1.26042765821917,1.16422815404479,0.857348140126369,2.83744373827638,3.38900753443934,2.30368628842969,2.13125464380219,0,0,0.220528398054962,0.49465875882444,0,0.180938774784468,0.119372344003136,0.164140899745061,1.1659233465194,5.00648315428376,0,0.619160603889667,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,2.86401185404534,1.10717597753397,0.406638934253697,0.756037385752609,0.627264888043406,1.52853794622324,0.539457385539283,0.661227645802687,0.26175594198403,0.129614973291793,0,0,0.598066184175915,0.330916980914195,1.36115831840833,0.516639293910924,0.844780627453891,0.58678619322877,0.2604087696879,0.209718688851422,0,0,0,1.62180172232131,2.05421914329655,2.07873316764472,0.537080087002444,0.596044064343795,0.721172697119813,0.443068581523732,0.605798699688886,0.762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.467507608726276,0,0,0,0,1.15913756419314,0.375364950902364,1.28206136987086,0.214368379079066,0,8.471277639256,8.74617949363636,8.02053718815155,3.60891682921744,2.74033007908257,5.2877572817279,4.72515750162264,5.40385443869065,3.17199686288943,4.14208249401456,0.415149390336707,1.19707462020309,0.682934423016537,1.94485373654635,0.419226325255965,0.919217542250071,1.33348036680969,1.03017528619447,0.64183841918363,1.51618327058278,0.760437899670719,0.377252682772152,0.468207537349412,0.89635213366817,0.746661096422973,0,0.811190281613988,0.77163688185482,0.824171801606613,1.32479028120958,1.02860775715625,1.24233064311536,0.476872379894642,0.872078499793971,0.376437521661322,0.930760686808441,0.548783918618318,1.31534855718921,0.271608227691724,0,1.42362021749009,1.37906275325789,0.409231043169689,0.929621047115796,1.35034627686799,2.49810577937946,0.233931608445408,0.859484216193193,1.14772999241306,0.220591419119515,1.15933917810211 | |||
|short_description=p6@Taok3 | |||
}} |
Latest revision as of 18:10, 1 October 2015
Short description: | p6@Taok3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Taok3_5end |
Coexpression cluster: | MCL_coexpression_mm9:278 |
Association with transcript: | -74bp_to_uc008zfk.2_5end |
EntrezGene: | Taok3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.20e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.20e-16 | 23 |
neuron | 2.89e-11 | 33 |
neuronal stem cell | 2.89e-11 | 33 |
neuroblast | 2.89e-11 | 33 |
electrically signaling cell | 2.89e-11 | 33 |
electrically responsive cell | 3.30e-11 | 39 |
electrically active cell | 3.30e-11 | 39 |
neural cell | 2.98e-09 | 43 |
ectodermal cell | 7.42e-09 | 44 |
neurectodermal cell | 7.42e-09 | 44 |