FFCP PHASE1:Hg19::chr8:81553800..81553804,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:81553800..81553804,- | |||
|coexpression_cluster_id=C4774 | |||
|description=CAGE_peak_at_chr8:81553800..81553804,- | |||
|id=chr8:81553800..81553804,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;9.90e-11;3!CL:0000333;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,8.99e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.02e-09!10;DOID:0050687!3.01e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:171;3.03e-26;10!DOID:3910;2.05e-15;2!DOID:3095;2.26e-12;22!DOID:2994;2.26e-12;22!DOID:3908;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.60e-26,10;DOID:3910,1.78e-15,2;DOID:3095,2.44e-12,22;DOID:2994,2.44e-12,22;DOID:3908,5.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002791!1.16e-18!33;UBERON:0002619!1.40e-18!22;UBERON:0002020!3.18e-18!34;UBERON:0003528!3.18e-18!34;UBERON:0001049!5.63e-18!57;UBERON:0005068!5.63e-18!57;UBERON:0006241!5.63e-18!57;UBERON:0007135!5.63e-18!57;UBERON:0001893!6.29e-18!34;UBERON:0007023!2.96e-17!115;UBERON:0002780!4.80e-17!41;UBERON:0001890!4.80e-17!41;UBERON:0006240!4.80e-17!41;UBERON:0003080!1.80e-16!42;UBERON:0001869!7.57e-16!32;UBERON:0000956!8.37e-16!25;UBERON:0000203!8.37e-16!25;UBERON:0001950!8.70e-16!20;UBERON:0002346!9.11e-16!90;UBERON:0000073!9.78e-16!94;UBERON:0001016!9.78e-16!94;UBERON:0002616!1.12e-15!59;UBERON:0001017!2.15e-14!82;UBERON:0005743!3.22e-14!86;UBERON:0000955!4.37e-13!69;UBERON:0006238!4.37e-13!69;UBERON:0003075!2.16e-12!86;UBERON:0007284!2.16e-12!86;UBERON:0000924!3.32e-10!173;UBERON:0006601!3.32e-10!173;UBERON:0003056!3.76e-10!61;UBERON:0001871!1.46e-09!7;UBERON:0004121!4.77e-08!169;UBERON:0000153!4.07e-07!129;UBERON:0007811!4.07e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.78e-29;4!UBERON:0000923;1.78e-29;4!UBERON:0010316;1.78e-29;4!UBERON:0005291;1.78e-29;4!UBERON:0002050;8.09e-24;5!UBERON:0005423;8.09e-24;5!UBERON:0004903;2.05e-15;2!UBERON:0002173;2.05e-15;2!UBERON:0002186;2.05e-15;2!UBERON:0004821;9.90e-11;3!UBERON:0007499;9.90e-11;3!UBERON:0003215;9.90e-11;3!UBERON:0010368;9.90e-11;3!UBERON:0009911;9.90e-11;3!UBERON:0002299;9.90e-11;3!UBERON:0006524;9.90e-11;3!UBERON:0008874;9.90e-11;3!UBERON:0002169;9.90e-11;3!UBERON:0004894;9.90e-11;3!UBERON:0000922;1.96e-08;49!UBERON:0009856;2.26e-08;4!UBERON:0002021;6.04e-07;5!UBERON:0000013;6.04e-07;5!UBERON:0002410;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.78e-15,2;UBERON:0002173,1.78e-15,2;UBERON:0002186,1.78e-15,2;UBERON:0004821,8.99e-11,3;UBERON:0003215,8.99e-11,3;UBERON:0010368,8.99e-11,3;UBERON:0009911,8.99e-11,3;UBERON:0002299,8.99e-11,3;UBERON:0006524,8.99e-11,3;UBERON:0008874,8.99e-11,3;UBERON:0002169,8.99e-11,3;UBERON:0004894,8.99e-11,3;UBERON:0002021,6.04e-07,5;UBERON:0000013,6.77e-07,5;UBERON:0002410,6.77e-07,5 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.50496973370552,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0,0,0,0.844016498463076,0,0.16480387422676,0.422250816255987,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.61221999997337,0,0.1137934482855,0,0,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0.663475559587348,0.295547618953547,0.219385397153973,0,0.278847488557207,0.0769502585037971,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.353024506766001,0.225980740780532,0.137041924646751,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.403100834920358,0,0,0,0.0824158583811665,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.122026264901963,0.3755727921195,0,0.332787154610557,0,0.830091809617385,0,0.151649117541648,0.570930667089935,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0.157265941855896,1.09209638192014,0.169732529954025,2.33832412111851,2.97445834221605,0,0,0.23658523500376,0,0,0,0.192687675289379,0,0.159633859057151,0,1.26035848110859,0,0,0,0,0.471878893390961,0,0,0,0,0,0.150420656698515,0,0,0.523813388962845,0.327543835020193,0.147856086217045,0,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0.879356221798103,0.127762427639595,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0,0.111231401892069,0.235479278551542,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0.860454717640555,0,0,0.846774100381858,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,1.79055697645231,0.237840181555137,0.67767649223376,0,0.301925687133347,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.573358332605805,0.157771562193185,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.517164979309476,0,0.23806443146374,0.129177819672012,0.124149428591716,0,0,0.202117188958219,0,0,0,0.143444410785353,0.665320713092027,0.0814032686109745,0,0,0,0,0.733448665097199,0.406896178315738,0,0,0 | |||
|short_description=p@chr8:81553800..81553804,- | |||
}} |
Latest revision as of 20:05, 31 July 2015
Short description: | p@chr8:81553800..81553804, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:81553800..81553804, - |
Coexpression cluster: | C4774_neuroectodermal_neuroblastoma_alveolar_parietal_temporal_occipital_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.78e-15 | 2 |
alveolar duct | 1.78e-15 | 2 |
bronchiole | 1.78e-15 | 2 |
pulmonary alveolus epithelium | 8.99e-11 | 3 |
alveolus | 8.99e-11 | 3 |
pulmonary lobule | 8.99e-11 | 3 |
lobule | 8.99e-11 | 3 |
alveolus of lung | 8.99e-11 | 3 |
alveolar system | 8.99e-11 | 3 |
pulmonary acinus | 8.99e-11 | 3 |
alveolar sac | 8.99e-11 | 3 |
alveolar wall | 8.99e-11 | 3 |
occipital lobe | 6.04e-07 | 5 |
sympathetic nervous system | 6.77e-07 | 5 |
autonomic nervous system | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.60e-26 | 10 |
lung adenocarcinoma | 1.78e-15 | 2 |
germ cell and embryonal cancer | 2.44e-12 | 22 |
germ cell cancer | 2.44e-12 | 22 |
non-small cell lung carcinoma | 5.70e-07 | 5 |