FFCP PHASE1:Hg19::chr8:68255941..68255952,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10565 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15772 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y6D6,E5RJN9 | |||
|association_with_transcript=-29bp_to_ENST00000262215,ENST00000519436,NM_006421,uc003xxo.1_5end | |||
|cluster_id=chr8:68255941..68255952,- | |||
|description=CAGE_peak_7_at_ARFGEF1_5end | |||
|id=chr8:68255941..68255952,- | |||
|ontology_enrichment_celltype=CL:0002057!1.85e-20!42;CL:0000860!1.33e-18!45;CL:0000766!9.75e-17!76;CL:0000738!6.46e-16!140;CL:0000557!4.02e-15!71;CL:0002009!8.21e-15!65;CL:0000763!1.90e-14!112;CL:0000049!1.90e-14!112;CL:0002194!3.60e-14!63;CL:0000576!3.60e-14!63;CL:0000040!3.60e-14!63;CL:0000559!3.60e-14!63;CL:0000037!3.97e-14!172;CL:0000566!3.97e-14!172;CL:0000839!6.42e-14!70;CL:0002032!4.95e-13!165;CL:0000837!4.95e-13!165;CL:0000988!1.21e-12!182;CL:0002031!3.99e-12!124;CL:0002087!9.20e-12!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.74e-49;33!CL:0002057;4.74e-49;33!CL:0000473;8.78e-33;39!CL:0000234;8.78e-33;39!CL:0000576;7.59e-24;48!CL:0000766;3.53e-18;69!CL:0000763;1.88e-09;100!CL:0000094;1.50e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.13e-43,42;CL:0002057,1.13e-43,42;CL:0000473,4.23e-37,48;CL:0000234,4.23e-37,48;CL:0000766,2.90e-35,72;CL:0002194,6.29e-28,59;CL:0000576,6.29e-28,59;CL:0000040,6.29e-28,59;CL:0000559,6.29e-28,59;CL:0000839,6.47e-28,66;CL:0000557,2.27e-27,67;CL:0002009,9.52e-27,61;CL:0000763,3.65e-23,108;CL:0000049,3.65e-23,108;CL:0000738,7.98e-21,136;CL:0002032,5.77e-17,161;CL:0000837,5.77e-17,161;CL:0002031,6.94e-17,120;CL:0000037,8.73e-16,168;CL:0002087,1.12e-15,115;CL:0000988,2.06e-14,177;CL:0000094,1.05e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-30;42!CL:0000049;2.88e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.72e-12!80;UBERON:0002390!6.48e-12!102;UBERON:0003061!6.48e-12!102;UBERON:0002193!1.19e-10!112;UBERON:0001474!3.04e-10!86;UBERON:0002405!4.63e-08!115;UBERON:0004765!8.97e-08!101;UBERON:0001434!8.97e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.50e-25,76;UBERON:0001474,1.93e-22,82;UBERON:0004765,1.16e-19,90;UBERON:0002405,9.60e-19,93;UBERON:0002390,2.42e-17,98;UBERON:0003061,2.42e-17,98;UBERON:0001434,8.00e-17,100;UBERON:0002193,6.11e-15,108;UBERON:0002204,9.76e-09,167;UBERON:0003081,1.69e-07,203 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.986680828671798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.821246550437305,0,0.0764134057479513,0.164201178899891,0.236132343941038,1.96682138424452,1.53531759238885,0.309632246632152,0,0,0.369754010166788,0.232401601740905,0.284338464974843,0.587200878669695,0,0.200544447470142,0.651032612147555,0.223915474239924,0.647787332037959,0.515151135268373,2.18097358169347,4.91238726795452,4.36651310138069,3.95129362739664,0.411167888021826,1.23882548358041,1.43846196161075,3.33008918487831,2.83778675866302,1.03423704220986,1.29096936716765,1.35426486594342,2.63539275359647,4.09359225086769,2.02251136000576,2.14258724659632,3.85114832491312,0.639337125799041,0,2.79249120670285,2.98357325372886,1.7412554317715,1.70215567407342,2.4912889959823,2.26123798731069,4.17186334736161,2.17188844705117,0.605399502633369,1.84138817993782,2.21523671208619,0.422510572623884,0.637812899895131,0.419317291016752,0.561643155732475,1.35159203557356,1.6072558669708,0.285012743741249,1.59133341759272,0.365328307529268,0,0,0,1.70692089026603,0.400395987036012,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,1.12101712596307,0.263384084775077,0.196709770113833,0.786021525498329,0.411202997999018,0.501559486172034,1.62961133316795,1.4203434172042,0,1.00269411196656,0.294605907474837,0.443067789167242,1.08321545506006,0.512365278902701,0.130059347559878,0.657751618414705,0.276350017785848,0.579606171470105,0.444859689486181,0.802622484269139,1.04535523804977,0.226618685395132,0.766440987203842,1.03088233644789,0.253019692019503,0,0.651083453856419,0,0.602300476311091,1.02389288923535,0,0.947109008176067,0,0.80642697289893,1.60464117470104,0.868946423296794,0,0,0,0.361439152384566,0,0,0,0,0.283604451492204,0.443458794925128,0.263504357079378,0,0,0,0,0.348259474598534,0.132957960518865,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0.367663080345869,0,0.17859945656816,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0.375355559615893,0.277064115484183,0,0,0.45071417671979,0,0.179389635688862,0,0,0,0.206105058476878,0.515281080091258,0,0.168776332241266,0.0974370051611986,0.504867548488229,0.184099797284599,0.161646056818812,0.710019185033229,0.201504196455281,0,0.386521706326594,0.545492241181669,0.573609190778008,0,0.397589304964456,0.348581828608555,0.310983165046111,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,1.58040879591855,0,0,0.468008530278475,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0,0,0.264145302039678,0.829312462163088,1.15295962733569,1.64115163454294,0.063497894292169,0,0,0,0,0,0,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0.358121926479791,0.224170287987055,0.591092280605782,0.862510299438069,1.28343036279748,0.76228387266739,0,0,0.335032530668698,0,0,0,2.07207756718018,0,0,0,0,0,0.630809660135739,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.213455115606889,0.606255142892519,0,0.30239029332968,0.248107807818777,0.153461973288062,0.841980283299221,0.896974044789907,0,0.482561763430822,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,1.40354529212299,0.0920809889358963,0.114814448164607,0,0.393373244878272,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0,0,1.30012049207304,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.435050081742686,0.0852266274161009,0.0890320356467374,0.495854746082934,0.384380134730212,0.255225424989168,0.2023155617111,0,0.62962469366128,0,0,0,0.869932992075073,0,1.00187420719394,0,0.632758849437452,0.190630193923825,0,0,0,0,0,0.823611089208164,0.589062011728432,0,0,0,0,0,1.05650146756755,0.136499911407986,0.282810863907425,0,0,0,1.31535265576129,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0,0.106824071127473,0,0,0,0,0.213425530045242,0,0.59873811429845,0.5745161103971,0.635020748171649,0,0.561594356226918,0,0,2.50634477090067,0.338583555603207,0.481764225311099,0.403599414382095,0.425846237690326,0.687010689511529,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0.556812347790485,0,0,0,0,0.18714054040822,0.586032717087576,0,0,0,0.95497793895076,0.593929361665277,0.614321404198464,0.994147647766298,0.140669416410513,0.111308705022906,0.16480387422676,0.211125408127993,0,2.21027132424918,0,0.306806047506464,0,0.311039587661807,0.179736702294654,0.179021174675609,0.511572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| |||
|short_description=p7@ARFGEF1 | |||
}} |
Latest revision as of 22:19, 18 September 2015
Short description: | p7@ARFGEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ARFGEF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000262215, ENST00000519436, NM_006421, uc003xxo.1_5end |
EntrezGene: | ARFGEF1 |
HGNC: | 15772 |
UniProt: | Q9Y6D6E5RJN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.13e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-43 | 42 |
defensive cell | 4.23e-37 | 48 |
phagocyte | 4.23e-37 | 48 |
myeloid leukocyte | 2.90e-35 | 72 |
monopoietic cell | 6.29e-28 | 59 |
monocyte | 6.29e-28 | 59 |
monoblast | 6.29e-28 | 59 |
promonocyte | 6.29e-28 | 59 |
myeloid lineage restricted progenitor cell | 6.47e-28 | 66 |
granulocyte monocyte progenitor cell | 2.27e-27 | 67 |
macrophage dendritic cell progenitor | 9.52e-27 | 61 |
myeloid cell | 3.65e-23 | 108 |
common myeloid progenitor | 3.65e-23 | 108 |
leukocyte | 7.98e-21 | 136 |
hematopoietic oligopotent progenitor cell | 5.77e-17 | 161 |
hematopoietic multipotent progenitor cell | 5.77e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 6.94e-17 | 120 |
hematopoietic stem cell | 8.73e-16 | 168 |
nongranular leukocyte | 1.12e-15 | 115 |
hematopoietic cell | 2.06e-14 | 177 |
granulocyte | 1.05e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.50e-25 | 76 |
bone element | 1.93e-22 | 82 |
skeletal element | 1.16e-19 | 90 |
immune system | 9.60e-19 | 93 |
hematopoietic system | 2.42e-17 | 98 |
blood island | 2.42e-17 | 98 |
skeletal system | 8.00e-17 | 100 |
hemolymphoid system | 6.11e-15 | 108 |
musculoskeletal system | 9.76e-09 | 167 |
lateral plate mesoderm | 1.69e-07 | 203 |