FFCP PHASE1:Mm9::chr5:107760176..107760216,+: Difference between revisions
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{{FFCP|EntrezGene=114642|HGNC=|MCL_coexpression_id=0|UniProt=G3X8Z8,Q91Y44,Q8BNZ8|association_with_transcript=0bp_to_ENSMUST00000031215,ENSMUST00000112677,ENSMUST00000161377,NM_001079873,NM_054054,uc008ymb.1,uc008ymc.1_5end|description=CAGE_peak_1_at_Brdt_5end|id=chr5:107760176..107760216,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!4.46e-30!18;UBERON:0005564!4.46e-30!18;UBERON:0004176!1.95e-28!17;UBERON:0009196!1.95e-28!17;UBERON:0009117!1.95e-28!17;UBERON:0003133!5.18e-27!24;UBERON:0003135!6.08e-25!15;UBERON:0005156!1.63e-24!26;UBERON:0000990!1.63e-24!26;UBERON:0000473!3.23e-23!14;UBERON:0003101!3.87e-23!16;UBERON:0000079!3.87e-23!16;UBERON:0003886!4.86e-15!38;UBERON:0002553!1.61e-14!39;UBERON:0002323!8.67e-14!37;UBERON:0004458!8.67e-14!37;UBERON:0000464!2.08e-09!57|ontology_enrichment_uberon_v019_2=UBERON:0004176,2.13e-47,17;UBERON:0009196,2.13e-47,17;UBERON:0009117,2.13e-47,17;UBERON:0003135,4.39e-46,15;UBERON:0000991,1.14e-44,18;UBERON:0005564,1.14e-44,18;UBERON:0003101,4.17e-43,16;UBERON:0000079,4.17e-43,16;UBERON:0000473,7.34e-42,14;UBERON:0003133,2.92e-38,24;UBERON:0005156,3.57e-35,26;UBERON:0000990,3.57e-35,26;UBERON:0003886,1.84e-23,38;UBERON:0002553,8.26e-23,39;UBERON:0002323,8.19e-21,37;UBERON:0004458,8.19e-21,37;UBERON:0000992,4.30e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,116.424264216815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7297750547562,0,0,0,0,0,0,0,0,0,0,16.4424786795446,0,0,0,0,0,0,0.352766121407114,0.125666591329675,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,1.42452482933804,1.46598263418218,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,651.06534418024,2.0932316446157,1.82004339502807,28.7787758749191,18.728174404271,15.5439635451516,10.9142231940551,3.25510962109875,11.0102311646996,214.768283414319,312.224526783526,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0,1.99787358036658,0,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p1@Brdt}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=114642 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=G3X8Z8,Q91Y44,Q8BNZ8 | |||
|association_with_transcript=0bp_to_ENSMUST00000031215,ENSMUST00000112677,ENSMUST00000161377,NM_001079873,NM_054054,uc008ymb.1,uc008ymc.1_5end | |||
|cluster_id=chr5:107760176..107760216,+ | |||
|description=CAGE_peak_1_at_Brdt_5end | |||
|id=chr5:107760176..107760216,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!4.46e-30!18;UBERON:0005564!4.46e-30!18;UBERON:0004176!1.95e-28!17;UBERON:0009196!1.95e-28!17;UBERON:0009117!1.95e-28!17;UBERON:0003133!5.18e-27!24;UBERON:0003135!6.08e-25!15;UBERON:0005156!1.63e-24!26;UBERON:0000990!1.63e-24!26;UBERON:0000473!3.23e-23!14;UBERON:0003101!3.87e-23!16;UBERON:0000079!3.87e-23!16;UBERON:0003886!4.86e-15!38;UBERON:0002553!1.61e-14!39;UBERON:0002323!8.67e-14!37;UBERON:0004458!8.67e-14!37;UBERON:0000464!2.08e-09!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,2.13e-47,17;UBERON:0009196,2.13e-47,17;UBERON:0009117,2.13e-47,17;UBERON:0003135,4.39e-46,15;UBERON:0000991,1.14e-44,18;UBERON:0005564,1.14e-44,18;UBERON:0003101,4.17e-43,16;UBERON:0000079,4.17e-43,16;UBERON:0000473,7.34e-42,14;UBERON:0003133,2.92e-38,24;UBERON:0005156,3.57e-35,26;UBERON:0000990,3.57e-35,26;UBERON:0003886,1.84e-23,38;UBERON:0002553,8.26e-23,39;UBERON:0002323,8.19e-21,37;UBERON:0004458,8.19e-21,37;UBERON:0000992,4.30e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,116.424264216815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7297750547562,0,0,0,0,0,0,0,0,0,0,16.4424786795446,0,0,0,0,0,0,0.352766121407114,0.125666591329675,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,1.42452482933804,1.46598263418218,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,651.06534418024,2.0932316446157,1.82004339502807,28.7787758749191,18.728174404271,15.5439635451516,10.9142231940551,3.25510962109875,11.0102311646996,214.768283414319,312.224526783526,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0,1.99787358036658,0,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p1@Brdt | |||
}} |
Latest revision as of 14:01, 1 October 2015
Short description: | p1@Brdt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Brdt_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000031215, ENSMUST00000112677, ENSMUST00000161377, NM_001079873, NM_054054, uc008ymb.1, uc008ymc.1_5end |
EntrezGene: | Brdt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
external genitalia | 2.13e-47 | 17 |
indifferent external genitalia | 2.13e-47 | 17 |
indifferent gonad | 2.13e-47 | 17 |
male reproductive organ | 4.39e-46 | 15 |
gonad | 1.14e-44 | 18 |
gonad primordium | 1.14e-44 | 18 |
male organism | 4.17e-43 | 16 |
male reproductive system | 4.17e-43 | 16 |
testis | 7.34e-42 | 14 |
reproductive organ | 2.92e-38 | 24 |
reproductive structure | 3.57e-35 | 26 |
reproductive system | 3.57e-35 | 26 |
body cavity precursor | 1.84e-23 | 38 |
anatomical cavity | 8.26e-23 | 39 |
body cavity | 8.19e-21 | 37 |
body cavity or lining | 8.19e-21 | 37 |
female gonad | 4.30e-07 | 3 |