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FFCP PHASE1:Mm9::chr5:104542607..104542618,-: Difference between revisions

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{{FFCP|EntrezGene=13602|HGNC=|MCL_coexpression_id=1|UniProt=P70663,Q3TYD5,Q3UYK7|association_with_transcript=488bp_to_ENSMUST00000031249,NM_010097,uc008ykb.2_5end|description=CAGE_peak_3_at_Sparcl1_5end|id=chr5:104542607..104542618,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.96e-16!73;UBERON:0005743!5.96e-16!73;UBERON:0001049!2.18e-15!52;UBERON:0005068!2.18e-15!52;UBERON:0006241!2.18e-15!52;UBERON:0007135!2.18e-15!52;UBERON:0000073!3.49e-15!75;UBERON:0001016!3.49e-15!75;UBERON:0000033!7.83e-15!63;UBERON:0000955!1.64e-14!50;UBERON:0006238!1.64e-14!50;UBERON:0002616!5.87e-14!49;UBERON:0004121!1.05e-13!102;UBERON:0000924!1.05e-13!102;UBERON:0006601!1.05e-13!102;UBERON:0002346!3.12e-12!71;UBERON:0003075!3.12e-12!71;UBERON:0007284!3.12e-12!71;UBERON:0002020!7.55e-11!34;UBERON:0003080!2.08e-10!40;UBERON:0003056!5.74e-10!49;UBERON:0002780!8.44e-10!39;UBERON:0001890!8.44e-10!39;UBERON:0006240!8.44e-10!39;UBERON:0004111!5.72e-09!122;UBERON:0002791!2.01e-08!29;UBERON:0003528!2.01e-08!29;UBERON:0001893!2.01e-08!29;UBERON:0000468!9.91e-08!333;UBERON:0000025!1.95e-07!114;UBERON:0002021!2.46e-07!10;UBERON:0000411!2.46e-07!10;UBERON:0001950!2.46e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.29e-16,54;UBERON:0001049,2.18e-15,52;UBERON:0005068,2.18e-15,52;UBERON:0006241,2.18e-15,52;UBERON:0007135,2.18e-15,52;UBERON:0001017,3.47e-15,73;UBERON:0001016,2.81e-14,75;UBERON:0004121,1.21e-13,95;UBERON:0000924,1.21e-13,95;UBERON:0006601,1.21e-13,95;UBERON:0010371,1.42e-13,73;UBERON:0002346,1.98e-13,64;UBERON:0003075,1.98e-13,64;UBERON:0007284,1.98e-13,64;UBERON:0000955,1.23e-12,47;UBERON:0006238,1.23e-12,47;UBERON:0002616,4.34e-12,46;UBERON:0010314,2.33e-11,92;UBERON:0002020,6.18e-11,34;UBERON:0003080,1.66e-10,40;UBERON:0002780,7.06e-10,39;UBERON:0001890,7.06e-10,39;UBERON:0006240,7.06e-10,39;UBERON:0003056,1.05e-09,49;UBERON:0004111,1.60e-09,122;UBERON:0003528,2.01e-08,29;UBERON:0002791,2.01e-08,29;UBERON:0001893,2.01e-08,29;UBERON:0000025,6.70e-08,114;UBERON:0002021,1.33e-07,10;UBERON:0000411,1.33e-07,10;UBERON:0001950,1.33e-07,10|phase1_expression=34.9124486688451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9822078226017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,2.18025156380447,2.41654801007919,4.47188767870852,9.51907667052465,5.75010257459886,0,0,0,2.31533492432352,9.16907007804022,0,4.24864567805155,6.87688273053643,2.53532561402472,0.338844532069132,3.55717918444456,0,0.988866362566974,0,5.69240209984969,12.2949857702897,1.65903379693564,1.4850653216486,2.10324961351382,32.5642122220336,39.5354688303388,1.22490799214954,1.53352753629178,0.919218786610021,88.092704799511,104.065180539428,101.994738082146,1.18697658957174,1.82975287204819,2.08365348222704,79.0087887173908,75.9729523542768,89.8453696927644,69.8269747572593,73.4637872923371,19.7583412574819,0.454357159999104,1.058001841495,2.02905142091174,0,0,0.539703191637817,0,0,7.44355426698285,1.1930122580464,0.519572009205738,0,43.3797732912176,0,2.54805239706646,0,0,0,0,4.33898742932428,0.258937883647172,0.445326417194474,0.520455980298408,1.52232739156071,1.61430848079241,1.50722640552623,1.52865319276416,0.502666365318702,1.48316980640624,4.33798070759735,0,2.26473589926373,2.20841518460394,0,5.59175283654366,93.3970742466835,75.8197078664707,1.27728527604296,0,0,0,184.242486467932,107.512641662377,8.16753288733619,106.554308277865,86.1761091203214,136.101169186512,108.863887518465,3.66621709861139,1.8661045591514,0.505445516867349,4.8401626853889,0.650602214813519,0.459804208866946,1.44049703844279,2.26057226753573,1.76894897793452,4.61209393025459,2.62364828767241,12.9351685369508,0,0.378212160335639,0.527853372491847,1.31517439456545,0.556094498451196,3.1342694986995,3.70407845534298,1.39323986772945,0,0,0,0.207125772535502,1.40715635988658,1.44049649168812,1.18372367792605,1.96764231747404,1.3884040159864,1.86027155800326,2.68273401399619,2.10177616260905,1.48103864922132,3.11918181750281,3.40489000092594,1.60819986167866,3.29325172936576,4.2946054003319,120.496140527245,23.153537785339,0,2.11560453330835,0.639864751605702,1.16118335930219,2.96395161040815,1.61346819698674,2.66853652613844,2.09248188723815,1.42358718463353,4.77626968699632,1.75934646160189,2.78539060857611,3.70431765526328,0.898819408654221,3.24207074812041,2.58883655230677,0.379335801906163,0.228497025219458,1.1270773567308,0.814605311381257,1.55161989734101,1.33258057791605,1.51767689098217,1.03327103585722,0.784993639206874,0.616985819609003,0,0,0.196558995113203,0,0,0,0.763877555344259,1.43848068725405,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0,8.31389355749721,1.51593129416388,5.54080919902888,5.43184274480602,6.57132695207806,6.365237782789,14.2826184531608,8.78101415360095,6.46304090835383,5.75808193086815,6.69710028361446,7.04612253277673,8.97961905702657,9.40218880779825,0,0,0.49176427301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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13602
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P70663,Q3TYD5,Q3UYK7
|association_with_transcript=488bp_to_ENSMUST00000031249,NM_010097,uc008ykb.2_5end
|cluster_id=chr5:104542607..104542618,-
|description=CAGE_peak_3_at_Sparcl1_5end
|id=chr5:104542607..104542618,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.96e-16!73;UBERON:0005743!5.96e-16!73;UBERON:0001049!2.18e-15!52;UBERON:0005068!2.18e-15!52;UBERON:0006241!2.18e-15!52;UBERON:0007135!2.18e-15!52;UBERON:0000073!3.49e-15!75;UBERON:0001016!3.49e-15!75;UBERON:0000033!7.83e-15!63;UBERON:0000955!1.64e-14!50;UBERON:0006238!1.64e-14!50;UBERON:0002616!5.87e-14!49;UBERON:0004121!1.05e-13!102;UBERON:0000924!1.05e-13!102;UBERON:0006601!1.05e-13!102;UBERON:0002346!3.12e-12!71;UBERON:0003075!3.12e-12!71;UBERON:0007284!3.12e-12!71;UBERON:0002020!7.55e-11!34;UBERON:0003080!2.08e-10!40;UBERON:0003056!5.74e-10!49;UBERON:0002780!8.44e-10!39;UBERON:0001890!8.44e-10!39;UBERON:0006240!8.44e-10!39;UBERON:0004111!5.72e-09!122;UBERON:0002791!2.01e-08!29;UBERON:0003528!2.01e-08!29;UBERON:0001893!2.01e-08!29;UBERON:0000468!9.91e-08!333;UBERON:0000025!1.95e-07!114;UBERON:0002021!2.46e-07!10;UBERON:0000411!2.46e-07!10;UBERON:0001950!2.46e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.29e-16,54;UBERON:0001049,2.18e-15,52;UBERON:0005068,2.18e-15,52;UBERON:0006241,2.18e-15,52;UBERON:0007135,2.18e-15,52;UBERON:0001017,3.47e-15,73;UBERON:0001016,2.81e-14,75;UBERON:0004121,1.21e-13,95;UBERON:0000924,1.21e-13,95;UBERON:0006601,1.21e-13,95;UBERON:0010371,1.42e-13,73;UBERON:0002346,1.98e-13,64;UBERON:0003075,1.98e-13,64;UBERON:0007284,1.98e-13,64;UBERON:0000955,1.23e-12,47;UBERON:0006238,1.23e-12,47;UBERON:0002616,4.34e-12,46;UBERON:0010314,2.33e-11,92;UBERON:0002020,6.18e-11,34;UBERON:0003080,1.66e-10,40;UBERON:0002780,7.06e-10,39;UBERON:0001890,7.06e-10,39;UBERON:0006240,7.06e-10,39;UBERON:0003056,1.05e-09,49;UBERON:0004111,1.60e-09,122;UBERON:0003528,2.01e-08,29;UBERON:0002791,2.01e-08,29;UBERON:0001893,2.01e-08,29;UBERON:0000025,6.70e-08,114;UBERON:0002021,1.33e-07,10;UBERON:0000411,1.33e-07,10;UBERON:0001950,1.33e-07,10
|phase1_expression=34.9124486688451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9822078226017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,2.18025156380447,2.41654801007919,4.47188767870852,9.51907667052465,5.75010257459886,0,0,0,2.31533492432352,9.16907007804022,0,4.24864567805155,6.87688273053643,2.53532561402472,0.338844532069132,3.55717918444456,0,0.988866362566974,0,5.69240209984969,12.2949857702897,1.65903379693564,1.4850653216486,2.10324961351382,32.5642122220336,39.5354688303388,1.22490799214954,1.53352753629178,0.919218786610021,88.092704799511,104.065180539428,101.994738082146,1.18697658957174,1.82975287204819,2.08365348222704,79.0087887173908,75.9729523542768,89.8453696927644,69.8269747572593,73.4637872923371,19.7583412574819,0.454357159999104,1.058001841495,2.02905142091174,0,0,0.539703191637817,0,0,7.44355426698285,1.1930122580464,0.519572009205738,0,43.3797732912176,0,2.54805239706646,0,0,0,0,4.33898742932428,0.258937883647172,0.445326417194474,0.520455980298408,1.52232739156071,1.61430848079241,1.50722640552623,1.52865319276416,0.502666365318702,1.48316980640624,4.33798070759735,0,2.26473589926373,2.20841518460394,0,5.59175283654366,93.3970742466835,75.8197078664707,1.27728527604296,0,0,0,184.242486467932,107.512641662377,8.16753288733619,106.554308277865,86.1761091203214,136.101169186512,108.863887518465,3.66621709861139,1.8661045591514,0.505445516867349,4.8401626853889,0.650602214813519,0.459804208866946,1.44049703844279,2.26057226753573,1.76894897793452,4.61209393025459,2.62364828767241,12.9351685369508,0,0.378212160335639,0.527853372491847,1.31517439456545,0.556094498451196,3.1342694986995,3.70407845534298,1.39323986772945,0,0,0,0.207125772535502,1.40715635988658,1.44049649168812,1.18372367792605,1.96764231747404,1.3884040159864,1.86027155800326,2.68273401399619,2.10177616260905,1.48103864922132,3.11918181750281,3.40489000092594,1.60819986167866,3.29325172936576,4.2946054003319,120.496140527245,23.153537785339,0,2.11560453330835,0.639864751605702,1.16118335930219,2.96395161040815,1.61346819698674,2.66853652613844,2.09248188723815,1.42358718463353,4.77626968699632,1.75934646160189,2.78539060857611,3.70431765526328,0.898819408654221,3.24207074812041,2.58883655230677,0.379335801906163,0.228497025219458,1.1270773567308,0.814605311381257,1.55161989734101,1.33258057791605,1.51767689098217,1.03327103585722,0.784993639206874,0.616985819609003,0,0,0.196558995113203,0,0,0,0.763877555344259,1.43848068725405,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0,8.31389355749721,1.51593129416388,5.54080919902888,5.43184274480602,6.57132695207806,6.365237782789,14.2826184531608,8.78101415360095,6.46304090835383,5.75808193086815,6.69710028361446,7.04612253277673,8.97961905702657,9.40218880779825,0,0,0.491764273019036,0.827810238914197,159.426735857877,125.885351400026,0.163934945376675,10.856249869788,0.94652465824877,2.34263246577983,1.07711698866399,0,0.222798674082394,0,0.809621403349789,0.876767573733936,0.395287777946524,77.1171159412337,6.38730383437209,2.84904965867608,4.56083486190013,15.6721616823909,0,1.69946445308487,0.906970670894253,1.88605079755898,1.77181135728464,2.76691633149535,3.10113951801865,2.54473610634254,2.49548164869305,2.84433082142234,2.10837217149998,1.03135543248187,8.17055053809091,3.42116078659489,2.45781499187234,2.14337035031592,1.95074257006501,1.96205699362278,3.78462747384878,3.04464949114599,0.23467170806371,1.69465656691056,2.8668691747145,2.96795255294664,8.23468576149118,2.95533332147964,2.26807453605959,1.31312719796049,2.91480836629851,174.6706344939,1.36696704638282,2.06386867963222,3.1483069652851,1.13021074202815,1.36694227721025,0.915112692826091,0,0,0,9.54670618015114,1.58167996790568,2.84647253977588,2.70013352054503,3.97267762427491,6.98760203987768,4.18079473792944,8.43065248398426,5.75863072364865,6.09190374471426,1.24267862617385,0.56369293868419,0.747582730219894,0.66183396182839,0.583353565032143,1.16243841129958,1.35164900392623,1.40828686374905,2.604087696879,0.838874755405687,0.483168241652012,1.15212002503146,0,2.02725215290164,0.924398614483445,0.51968329191118,0.358053391334963,0.39736270956253,0,0.590758108698309,0.302899349844443,0.15241361331,0.302478555410522,0.292373642219257,0.192423683280659,0.233753804363138,4.0811469050738,0,0,0,34.7741269257943,11.4486310025221,7.69236821922513,6.43105137237198,2.50786052017682,106.738098254626,98.5096006125358,95.1006552309398,68.9131261198187,87.6905625306422,86.8702981998156,74.9274975257304,88.7132770351714,83.3782032530936,83.359410192043,1.03787347584177,1.99512436700516,2.21953687480374,2.18796045361465,1.67690530102386,1.65459157605013,6.44515510624684,5.56294654545014,6.09746498224449,6.06473308233114,5.83002389747551,6.79054828989874,5.80577346313271,5.57018825922363,5.68611142660571,6.66811167796303,4.51948871184936,4.62982129112892,7.41754621445952,5.00476328456951,4.4573002810104,4.79184676630211,4.76872379894642,5.95920308192547,4.04670335785922,6.00763716030903,3.84148743032822,7.10288220882176,4.75314398460516,5.05028044491965,4.98267076121531,2.85662998889134,3.27384834535751,4.33823155320705,4.82266527452853,4.24677982494508,7.01794825336225,6.01638951335235,8.41668661102911,7.27951683094401,8.34724208233517
|short_description=p3@Sparcl1
}}

Latest revision as of 12:54, 1 October 2015

Short description:p3@Sparcl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sparcl1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 488bp_to_ENSMUST00000031249, NM_010097, uc008ykb.2_5end
EntrezGene:Sparcl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sparcl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G734.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A323.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E812.29
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F132.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D539.54
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D388.09
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3104.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7101.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E479.01
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E575.97
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I689.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D669.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F673.46
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.76
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G643.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H14.34
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B293.40
cerebellum, neonate N30.CNhs11135.1395-42I275.82
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4184.24
corpus striatum, adult.CNhs10487.19-21D8107.51
corpus striatum, neonate N00.CNhs11226.630-43F18.17
cortex, adult.CNhs10473.12-14D5106.55
cortex, neonate N30.CNhs11107.1392-42F286.18
diencephalon, adult.CNhs10482.20-12F2136.10
diencephalon, neonate N30.CNhs11201.1388-42B2108.86
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A212.94
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G13.40
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D24.29
hippocampus, adult.CNhs10478.13-16E8120.50
hippocampus, neonate N00.CNhs11228.627-43G123.15
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D82.96
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B18.31
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F85.54
lung, embryo E15.CNhs11020.432-17C55.43
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I614.28
lung, neonate N00.CNhs11224.640-42C68.78
lung, neonate N06.CNhs11212.683-20E56.46
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E66.70
lung, neonate N20.CNhs11109.822-18A47.05
lung, neonate N25.CNhs11119.1359-25C78.98
lung, neonate N30.CNhs11133.1394-42H29.40
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C2159.43
medulla oblongata, neonate N30.CNhs11200.1396-42A3125.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.86
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I977.12
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I44.56
oviduct, adult pregnant day01.CNhs10500.988-6G615.67
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G88.17
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G48.23
skin, neonate N03.CNhs11215.662-22H32.96
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C9174.67
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C66.99
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A98.43
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I16.09
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E434.77
uterus, adult pregnant day19.CNhs10497.590-15F511.45
uterus, adult.CNhs10509.92-27E57.69
vagina, adult.CNhs10502.89-27D56.43
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1106.74
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A298.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A395.10
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D768.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A487.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A586.87
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A674.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A788.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A883.38
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A983.36
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C68.42
whole body, neonate N06.CNhs10515.692-21D17.28
whole body, neonate N10.CNhs10518.761-6B48.35





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.29e-1654
neural tube2.18e-1552
neural rod2.18e-1552
future spinal cord2.18e-1552
neural keel2.18e-1552
central nervous system3.47e-1573
nervous system2.81e-1475
ectoderm-derived structure1.21e-1395
ectoderm1.21e-1395
presumptive ectoderm1.21e-1395
ecto-epithelium1.42e-1373
neurectoderm1.98e-1364
neural plate1.98e-1364
presumptive neural plate1.98e-1364
brain1.23e-1247
future brain1.23e-1247
regional part of brain4.34e-1246
structure with developmental contribution from neural crest2.33e-1192
gray matter6.18e-1134
anterior neural tube1.66e-1040
regional part of forebrain7.06e-1039
forebrain7.06e-1039
future forebrain7.06e-1039
pre-chordal neural plate1.05e-0949
anatomical conduit1.60e-09122
brain grey matter2.01e-0829
regional part of telencephalon2.01e-0829
telencephalon2.01e-0829
tube6.70e-08114
occipital lobe1.33e-0710
visual cortex1.33e-0710
neocortex1.33e-0710
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