FFCP PHASE1:Hg19::chr8:62627057..62627159,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=444 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=757 | |||
|TSSclassifier=strong | |||
|UniProt=Q6NXR7,Q12797,E5RHJ2,Q8TB28,E5RG56 | |||
|association_with_transcript=0bp_to_ENST00000356457,ENST00000379449,ENST00000379454,ENST00000517856,ENST00000518068,ENST00000519234_5end | |||
|cluster_id=chr8:62627057..62627159,- | |||
|description=CAGE_peak_1_at_ASPH_5end | |||
|id=chr8:62627057..62627159,- | |||
|ontology_enrichment_celltype=CL:0000055!2.37e-17!180;CL:0000057!8.17e-16!75;CL:0000548!3.84e-12!679;CL:0000004!3.84e-12!679;CL:0000255!3.84e-12!679;CL:0000012!2.42e-11!682;CL:0000680!2.38e-10!57;CL:0000056!2.38e-10!57;CL:0000355!2.38e-10!57;CL:0002620!1.26e-09!23;CL:0000187!1.83e-09!54;CL:0000192!9.83e-08!42;CL:0000514!9.83e-08!42;CL:0000183!2.07e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.28e-09;23!CL:0000860;3.08e-08;33!CL:0002057;3.08e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.46e-16,76;CL:0000680,1.39e-10,58;CL:0000056,1.39e-10,58;CL:0000355,1.39e-10,58;CL:0000187,1.08e-09,55;CL:0002620,1.26e-09,23;CL:0000192,5.85e-08,43;CL:0000514,5.85e-08,43;CL:0000393,8.54e-07,61;CL:0000211,8.54e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.09e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.09e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.09e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000467!1.75e-15!625;UBERON:0000480!4.10e-15!626;UBERON:0000468!3.01e-14!659;UBERON:0000926!5.23e-14!448;UBERON:0004120!5.23e-14!448;UBERON:0006603!5.23e-14!448;UBERON:0005256!2.08e-13!143;UBERON:0000062!2.33e-13!511;UBERON:0000914!2.73e-12!83;UBERON:0002329!2.73e-12!83;UBERON:0003077!2.73e-12!83;UBERON:0003059!2.73e-12!83;UBERON:0007282!2.73e-12!83;UBERON:0009618!2.73e-12!83;UBERON:0007285!2.73e-12!83;UBERON:0003104!5.45e-12!238;UBERON:0009142!5.45e-12!238;UBERON:0000475!5.89e-12!365;UBERON:0002100!7.23e-12!216;UBERON:0003102!1.30e-11!95;UBERON:0000481!8.01e-11!347;UBERON:0000923!2.52e-10!604;UBERON:0005291!2.52e-10!604;UBERON:0006598!2.52e-10!604;UBERON:0002532!2.52e-10!604;UBERON:0002050!2.90e-10!605;UBERON:0005423!2.90e-10!605;UBERON:0004290!4.01e-10!70;UBERON:0000486!5.79e-10!82;UBERON:0002204!1.55e-09!167;UBERON:0000922!2.43e-09!612;UBERON:0001134!1.19e-08!61;UBERON:0002036!1.19e-08!61;UBERON:0003082!1.19e-08!61;UBERON:0000490!1.56e-08!138;UBERON:0002385!2.78e-08!63;UBERON:0001015!2.78e-08!63;UBERON:0000383!2.78e-08!63;UBERON:0002199!7.06e-08!45;UBERON:0002416!7.06e-08!45;UBERON:0000477!8.98e-07!286 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.18e-12,99;UBERON:0005256,4.27e-11,122;UBERON:0003104,6.36e-11,160;UBERON:0009142,6.36e-11,160;UBERON:0007524,1.77e-10,73;UBERON:0002100,2.37e-10,199;UBERON:0002329,2.39e-10,71;UBERON:0003059,2.39e-10,71;UBERON:0007282,2.39e-10,71;UBERON:0004290,2.39e-10,71;UBERON:0009618,2.39e-10,71;UBERON:0003077,3.35e-10,72;UBERON:0007285,3.35e-10,72;UBERON:0000486,3.50e-10,83;UBERON:0000490,4.56e-10,148;UBERON:0002204,3.25e-09,167;UBERON:0001134,7.19e-09,62;UBERON:0002036,7.19e-09,62;UBERON:0003082,7.19e-09,62;UBERON:0002385,1.69e-08,64;UBERON:0001015,1.69e-08,64;UBERON:0000383,1.69e-08,64;UBERON:0005423,2.17e-08,581;UBERON:0007503,2.45e-08,78;UBERON:0002050,2.78e-08,564;UBERON:0000923,4.04e-08,560;UBERON:0010316,4.04e-08,560;UBERON:0005291,4.04e-08,560;UBERON:0006598,4.04e-08,560;UBERON:0010317,4.04e-08,560;UBERON:0002532,4.04e-08,560;UBERON:0002199,5.71e-08,46;UBERON:0002416,5.71e-08,46;UBERON:0000922,6.30e-08,592 | |||
|phase1_expression=144.434311520093,281.328088392752,196.208530501592,232.170052179263,250.298212879281,208.488907259988,347.020833090585,276.693304560952,315.251053237205,92.1502261880658,83.0383389887189,55.9209912653241,51.17079377632,212.13552897352,272.740040224075,273.636334605873,321.838877964804,284.820935251076,315.692520817458,57.7437762380135,82.212278571434,29.7781985404183,102.186247405787,101.834572254226,104.451476142876,20.9372731749386,19.9504432363368,22.1177295491439,12.194292582316,14.2016877295969,15.0171639616594,105.733440815077,115.36186689207,103.161368836534,37.1067890779645,29.2868618924088,29.3600439334847,42.6576464569546,45.5235895757222,41.015054565296,56.6506149827009,68.6654571960237,73.6666123433774,190.907887517568,314.014909205401,251.317087390578,280.541847545161,435.426793415114,442.880110379998,484.473988670501,430.606147675418,455.464774765415,376.462283364387,275.621959890294,303.355329971326,226.455534469753,418.09222188862,289.219124480824,255.886134022075,276.961750366669,198.194508997703,334.46921838933,369.606157572884,381.897376477294,341.576273865843,569.654765589904,587.944203051823,599.479315302589,426.573027267725,468.476338028937,357.185706553688,371.96041234744,346.526314247768,8.02770087985379,5.95292039902122,5.45112478321777,24.8246274833754,21.4752956763354,23.7873868311679,5.13022938734247,3.38158351238453,5.29726045917438,8.79981222306614,17.4764355603882,17.7901850772711,24.3236226862909,21.2209873129087,19.5415829584524,12.5598525829124,19.0810750907073,18.2148150115023,17.0298784917572,17.9668417218858,21.1474125726441,26.3439024601322,24.2313357993071,11.80258620683,6.6811829667358,10.074473450976,3.51091640320424,17.9257246648475,12.3096429491031,7.79306913631645,8.80142609392871,6.77593587192126,5.31681347000691,6.77009659412539,4.73937882984998,7.41338281091306,7.89301942097645,5.52700035571697,6.37566788617116,17.201241326799,18.4603171381902,12.5442628565972,3.85251765171725,9.96373283364995,11.3397057009268,6.32549230048757,8.28270077242652,10.4173352617027,4.75226022224187,13.1000353597662,13.5665807823683,6.24653632761729,10.1814218378927,4.10563998460523,5.24177532384304,9.09296665663925,10.4273570795615,543.689311880135,270.963147320269,186.423615167867,369.390813737027,229.111425160602,321.84896513095,278.350081467885,254.510037168279,184.53196310426,231.928949745842,218.181607661725,56.3210024640164,61.2016084331471,60.8086486166464,111.968850810866,119.801259261896,131.495422953158,124.730596511694,113.254992334465,96.2074928443573,48.498027397476,86.8836941057186,57.2781827652531,91.5798865916896,74.2514002091533,90.2387177563421,82.762006748577,185.284816324409,188.20035296127,227.610016679976,73.3149357138648,140.650339557925,64.4323831927168,109.195934862723,119.090866338619,93.3182160568634,125.287389925403,95.1567010084073,58.2603222370356,45.5647516592702,37.5563575057335,76.4326421129167,158.989908300813,70.6472364470906,273.83154538412,270.736033938872,437.215115045249,741.472664635683,324.521569711497,144.094143236573,157.988513679963,181.053980538195,285.691730496985,277.369273791488,251.077483182273,114.880287582503,167.0910180992,84.8243583238344,424.849864566066,168.289187355613,287.688710062217,246.495012653262,282.792033811126,296.632103755149,425.048984552688,206.975824670329,344.694806002354,387.288931473949,334.304888384609,184.762756473419,114.260284548782,250.820809791559,308.542270004264,633.091503881358,429.75909084234,252.545943738392,306.936354346177,239.909067383444,403.447290664251,303.892164288821,550.175215410223,686.608427841113,471.465321265858,393.674745189721,330.543536844903,595.105347482705,333.429431661622,392.282085175354,484.550666453064,265.422825296489,736.289894879458,312.230752407457,274.179477766058,142.43324878135,161.738449510365,193.0194926968,32.6889532427316,46.6504784491628,41.1326557758095,57.7392076435613,37.5958067804686,50.7318529115404,220.59384058504,262.442302782697,154.711111914778,231.719596087958,214.398206055867,268.201515690326,291.820098525194,313.796360908294,261.727597293971,282.589638987851,295.876462031537,226.246935092756,237.624194266794,239.697478777601,64.2195245523444,89.7547352342053,67.909711869681,86.7351397174697,168.584196313035,124.819056518059,154.196165643846,0,117.576947247217,355.145367317948,117.323055101821,47.2087363682002,131.89401180406,130.920061454161,57.6680700399275,205.907087485357,303.095818253074,150.47766565765,336.845543762572,66.9860317611382,72.2257399619513,81.0482688519389,17.3844967551041,21.4621540523718,213.716361283861,166.845041044276,221.757694134783,125.603337542281,255.668799118664,151.982904243838,111.500360765046,203.153123021259,126.899666803685,8.86793828212698,3.52193736052904,7.87846839054934,9.51191692551945,4.92345490362882,49.0838722878467,28.2671434913125,21.0991404978085,68.4289784090821,107.146247396863,67.5771880148814,84.8904504912817,113.700919526196,134.27570120065,235.489235771071,301.978728010169,143.062578340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| |||
|short_description=p1@ASPH | |||
}} |
Latest revision as of 17:34, 18 September 2015
Short description: | p1@ASPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ASPH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000356457, ENST00000379449, ENST00000379454, ENST00000517856, ENST00000518068, ENST00000519234_5end |
EntrezGene: | ASPH |
HGNC: | 757 |
UniProt: | Q6NXR7Q12797E5RHJ2Q8TB28E5RG56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.46e-16 | 76 |
muscle precursor cell | 1.39e-10 | 58 |
myoblast | 1.39e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-10 | 58 |
muscle cell | 1.08e-09 | 55 |
skin fibroblast | 1.26e-09 | 23 |
smooth muscle cell | 5.85e-08 | 43 |
smooth muscle myoblast | 5.85e-08 | 43 |
electrically responsive cell | 8.54e-07 | 61 |
electrically active cell | 8.54e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.09e-07 | 14 |