FFCP PHASE1:Mm9::chr4:99323019..99323031,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=15221|HGNC=|MCL_coexpression_id=263|UniProt=A2BDY3,Q61060|association_with_transcript=29bp_to_ENSMUST00000087285,NM_010425,uc008tuv.1_5end|description=CAGE_peak_4_at_Foxd3_5end|id=chr4:99323019..99323031,+|ontology_enrichment_celltype=CL:0000107!1.43e-26!9;CL:0000221!1.95e-18!44;CL:0000133!1.95e-18!44;CL:0002319!1.07e-16!43;CL:0000540!7.68e-15!33;CL:0000047!7.68e-15!33;CL:0000031!7.68e-15!33;CL:0000404!7.68e-15!33;CL:0000055!8.00e-14!50;CL:0000393!4.35e-12!39;CL:0000211!4.35e-12!39;CL:0002321!1.82e-11!70;CL:0000220!1.82e-11!70;CL:0000630!3.87e-10!3;CL:0002612!4.47e-09!3;CL:0000325!1.81e-07!2;CL:0000217!1.81e-07!2;CL:0000328!1.81e-07!2;CL:0002573!1.81e-07!2;CL:0002376!1.81e-07!2;CL:0000218!1.81e-07!2;CL:0000692!1.81e-07!2;CL:0002377!1.81e-07!2;CL:0002375!1.81e-07!2|ontology_enrichment_celltype_v019_2=CL:0000217,3.41e-30,2;CL:0000328,3.41e-30,2;CL:0002573,3.41e-30,2;CL:0002376,3.41e-30,2;CL:0000218,3.41e-30,2;CL:0000692,3.41e-30,2;CL:0002377,3.41e-30,2;CL:0002375,3.41e-30,2;CL:0000107,3.57e-26,9;CL:0000215,1.59e-20,3;CL:0002319,1.38e-12,43;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002321,7.20e-08,70;CL:0000540,1.46e-07,33;CL:0000047,1.46e-07,33;CL:0000031,1.46e-07,33;CL:0000404,1.46e-07,33;CL:0000333,7.47e-07,10;CL:0000095,7.47e-07,10;CL:0000243,7.47e-07,10;CL:0000123,7.47e-07,10;CL:0000125,7.47e-07,10;CL:0000030,7.47e-07,10;CL:0000339,7.47e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.64e-32!11;UBERON:0002410!1.43e-26!9;UBERON:0000013!4.44e-10!3;UBERON:0000011!7.12e-10!3;UBERON:0002005!8.14e-10!3;UBERON:0005428!8.14e-10!3;UBERON:0001948!2.98e-09!5;UBERON:0002315!2.98e-09!5;UBERON:0000073!3.95e-09!75;UBERON:0001016!3.95e-09!75;UBERON:0002257!4.47e-09!3;UBERON:0004121!2.41e-08!102;UBERON:0000924!2.41e-08!102;UBERON:0006601!2.41e-08!102;UBERON:0002240!1.02e-07!6;UBERON:0005174!1.02e-07!6;UBERON:0001137!1.02e-07!6;UBERON:0001017!4.86e-07!73;UBERON:0005743!4.86e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.34e-47,11;UBERON:0002410,3.57e-26,9;UBERON:0000013,3.11e-20,3;UBERON:0000011,3.11e-20,3;UBERON:0001016,2.31e-07,75|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0.372798891650601,1.51452386666368,2.56943304363071,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0.390438744296638,0.861693590931196,0.238968797952552,2.22798674082394,1.13230612315533,1.21443210502468,0.584511715822624,1.58115111178609,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p4@Foxd3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15221 | |||
|HGNC= | |||
|MCL_coexpression_id=263 | |||
|TSSclassifier=NA | |||
|UniProt=A2BDY3,Q61060 | |||
|association_with_transcript=29bp_to_ENSMUST00000087285,NM_010425,uc008tuv.1_5end | |||
|cluster_id=chr4:99323019..99323031,+ | |||
|description=CAGE_peak_4_at_Foxd3_5end | |||
|id=chr4:99323019..99323031,+ | |||
|ontology_enrichment_celltype=CL:0000107!1.43e-26!9;CL:0000221!1.95e-18!44;CL:0000133!1.95e-18!44;CL:0002319!1.07e-16!43;CL:0000540!7.68e-15!33;CL:0000047!7.68e-15!33;CL:0000031!7.68e-15!33;CL:0000404!7.68e-15!33;CL:0000055!8.00e-14!50;CL:0000393!4.35e-12!39;CL:0000211!4.35e-12!39;CL:0002321!1.82e-11!70;CL:0000220!1.82e-11!70;CL:0000630!3.87e-10!3;CL:0002612!4.47e-09!3;CL:0000325!1.81e-07!2;CL:0000217!1.81e-07!2;CL:0000328!1.81e-07!2;CL:0002573!1.81e-07!2;CL:0002376!1.81e-07!2;CL:0000218!1.81e-07!2;CL:0000692!1.81e-07!2;CL:0002377!1.81e-07!2;CL:0002375!1.81e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,3.41e-30,2;CL:0000328,3.41e-30,2;CL:0002573,3.41e-30,2;CL:0002376,3.41e-30,2;CL:0000218,3.41e-30,2;CL:0000692,3.41e-30,2;CL:0002377,3.41e-30,2;CL:0002375,3.41e-30,2;CL:0000107,3.57e-26,9;CL:0000215,1.59e-20,3;CL:0002319,1.38e-12,43;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002321,7.20e-08,70;CL:0000540,1.46e-07,33;CL:0000047,1.46e-07,33;CL:0000031,1.46e-07,33;CL:0000404,1.46e-07,33;CL:0000333,7.47e-07,10;CL:0000095,7.47e-07,10;CL:0000243,7.47e-07,10;CL:0000123,7.47e-07,10;CL:0000125,7.47e-07,10;CL:0000030,7.47e-07,10;CL:0000339,7.47e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.64e-32!11;UBERON:0002410!1.43e-26!9;UBERON:0000013!4.44e-10!3;UBERON:0000011!7.12e-10!3;UBERON:0002005!8.14e-10!3;UBERON:0005428!8.14e-10!3;UBERON:0001948!2.98e-09!5;UBERON:0002315!2.98e-09!5;UBERON:0000073!3.95e-09!75;UBERON:0001016!3.95e-09!75;UBERON:0002257!4.47e-09!3;UBERON:0004121!2.41e-08!102;UBERON:0000924!2.41e-08!102;UBERON:0006601!2.41e-08!102;UBERON:0002240!1.02e-07!6;UBERON:0005174!1.02e-07!6;UBERON:0001137!1.02e-07!6;UBERON:0001017!4.86e-07!73;UBERON:0005743!4.86e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.34e-47,11;UBERON:0002410,3.57e-26,9;UBERON:0000013,3.11e-20,3;UBERON:0000011,3.11e-20,3;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0.372798891650601,1.51452386666368,2.56943304363071,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0.390438744296638,0.861693590931196,0.238968797952552,2.22798674082394,1.13230612315533,1.21443210502468,0.584511715822624,1.58115111178609,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Foxd3 | |||
}} |
Latest revision as of 08:39, 27 September 2015
Short description: | p4@Foxd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Foxd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:263 |
Association with transcript: | 29bp_to_ENSMUST00000087285, NM_010425, uc008tuv.1_5end |
EntrezGene: | Foxd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 3.41e-30 | 2 |
myelin accumulating cell | 3.41e-30 | 2 |
Schwann cell | 3.41e-30 | 2 |
non-myelinating Schwann cell | 3.41e-30 | 2 |
myelinating Schwann cell;;Schwann cell | 3.41e-30 | 2 |
terminal Schwann cell | 3.41e-30 | 2 |
immature Schwann cell | 3.41e-30 | 2 |
Schwann cell precursor | 3.41e-30 | 2 |
autonomic neuron | 3.57e-26 | 9 |
barrier cell | 1.59e-20 | 3 |
neural cell | 1.38e-12 | 43 |
ectodermal cell | 2.60e-12 | 44 |
neurectodermal cell | 2.60e-12 | 44 |
embryonic cell | 7.20e-08 | 70 |
neuron | 1.46e-07 | 33 |
neuronal stem cell | 1.46e-07 | 33 |
neuroblast | 1.46e-07 | 33 |
electrically signaling cell | 1.46e-07 | 33 |
migratory neural crest cell | 7.47e-07 | 10 |
neuron associated cell | 7.47e-07 | 10 |
glial cell (sensu Vertebrata) | 7.47e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 7.47e-07 | 10 |
glial cell | 7.47e-07 | 10 |
glioblast | 7.47e-07 | 10 |
glioblast (sensu Vertebrata) | 7.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.34e-47 | 11 |
autonomic nervous system | 3.57e-26 | 9 |
sympathetic nervous system | 3.11e-20 | 3 |
parasympathetic nervous system | 3.11e-20 | 3 |
nervous system | 2.31e-07 | 75 |