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FFCP PHASE1:Mm9::chr4:98860815..98860895,+: Difference between revisions

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{{FFCP|EntrezGene=242557|HGNC=|MCL_coexpression_id=1|UniProt=Q3UYA5,Q811C2|association_with_transcript=0bp_to_NM_001145967,uc012dhi.1_5end|description=CAGE_peak_1_at_Atg4c_5end|id=chr4:98860815..98860895,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.22e-15!51;UBERON:0000033!2.69e-10!63;UBERON:0000955!3.93e-09!50;UBERON:0006238!3.93e-09!50;UBERON:0001049!7.28e-09!52;UBERON:0005068!7.28e-09!52;UBERON:0006241!7.28e-09!52;UBERON:0007135!7.28e-09!52;UBERON:0002616!1.03e-08!49;UBERON:0002020!2.32e-08!34;UBERON:0004121!1.04e-07!102;UBERON:0000924!1.04e-07!102;UBERON:0006601!1.04e-07!102;UBERON:0002346!1.33e-07!71;UBERON:0003075!1.33e-07!71;UBERON:0007284!1.33e-07!71;UBERON:0002021!1.87e-07!10;UBERON:0000411!1.87e-07!10;UBERON:0001950!1.87e-07!10;UBERON:0002791!2.08e-07!29;UBERON:0003528!2.08e-07!29;UBERON:0001893!2.08e-07!29;UBERON:0003056!3.03e-07!49;UBERON:0000073!4.35e-07!75;UBERON:0001016!4.35e-07!75;UBERON:0001017!5.75e-07!73;UBERON:0005743!5.75e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.22e-15,51;UBERON:0000073,9.95e-10,54;UBERON:0010371,3.33e-09,73;UBERON:0002346,5.95e-09,64;UBERON:0003075,5.95e-09,64;UBERON:0007284,5.95e-09,64;UBERON:0001049,7.28e-09,52;UBERON:0005068,7.28e-09,52;UBERON:0006241,7.28e-09,52;UBERON:0007135,7.28e-09,52;UBERON:0004121,1.02e-08,95;UBERON:0000924,1.02e-08,95;UBERON:0006601,1.02e-08,95;UBERON:0002020,2.32e-08,34;UBERON:0000955,9.11e-08,47;UBERON:0006238,9.11e-08,47;UBERON:0002021,1.87e-07,10;UBERON:0000411,1.87e-07,10;UBERON:0001950,1.87e-07,10;UBERON:0003528,2.08e-07,29;UBERON:0002791,2.08e-07,29;UBERON:0001893,2.08e-07,29;UBERON:0002616,2.27e-07,46;UBERON:0003056,3.03e-07,49;UBERON:0001016,4.35e-07,75;UBERON:0001017,5.75e-07,73|phase1_expression=15.2141404749554,12.563114675017,11.3749809847384,32.6661348211376,21.0376206577466,7.72244650794693,13.783145795136,1.67860320474049,0,0.234064526321993,1.54096171402954,1.11681022593471,2.56801094896809,2.71003247498892,7.99463428357591,7.89653542820321,5.59649502502517,13.0916798623669,14.8083588294198,15.2780274647291,15.818051968099,11.5177503393027,16.9779862940308,10.0795226359846,11.2410547722913,9.76194338995534,14.2151458732495,11.2045040996662,15.771943814879,13.3575968772763,7.09537634096975,7.62036808151557,7.99584223859941,31.6963362030877,13.5760261283099,11.3039558843775,14.2918549383658,7.95210098400125,8.5946887897618,12.0410461113974,8.2352408324342,8.19654581950135,14.5653105909346,4.65818226509636,4.66333883609767,4.03802854755699,7.82391344348039,9.3750817243592,8.34807494390993,11.2769341463084,8.11921245427103,4.31257693094915,5.70460860596304,2.90144856804538,1.00828139742739,6.17422646486273,8.88253663810146,4.64104883049698,13.7575193384526,11.1088105647127,15.2119536841483,3.72728985276045,4.4464739805557,9.44894703145469,11.8663963508037,6.3943210345149,5.39280198933128,4.61061966385865,10.9910989046986,10.3954572515402,9.46462326081219,16.5677570954206,17.2277461942259,11.8816075238505,12.8432931164437,13.7882817991503,40.7428759697738,36.7739533685341,34.5614699826548,13.8480602116704,13.7231465403614,12.5019208933622,36.0146068711781,34.3285192119325,31.4764390420229,15.9099436155781,15.5185132071022,17.1487490159277,11.4346551933108,16.1723138628521,16.8121403446973,25.8127163094416,3.39985666853875,22.1278308571505,27.9403859502498,30.9138552097162,11.6568868709354,5.45377032249785,3.89679006904303,4.59341446863442,14.084341977668,8.98285341900225,5.09610479413291,7.11066703153331,9.30911476348221,10.6411143499541,13.6491600153991,14.6155366040397,23.8222852955398,18.1099409659086,7.11289839741157,8.22056791442781,7.37969591219387,11.6056433225519,9.52468527799209,12.8179923156269,20.0227923864843,21.8345028949067,12.3845477272982,10.5148452465816,14.7963817368464,15.5160081003271,18.6391761218122,38.3542844085127,43.1460216035717,28.3557331281536,6.4700167233197,4.19931911695385,5.33694953706872,45.8359356578757,35.6850470198529,14.3245961408665,55.6237824615285,55.7459696980121,35.7395436642443,42.3449696606847,6.21220119486929,19.5318943857846,31.5903448042093,34.9333480771547,9.75903322220278,10.8053989083732,9.72335500948886,15.9747106905858,15.7164313039567,19.601399203582,15.554486276915,45.2730898793277,9.05385570317937,13.615637772083,15.8356011747554,9.86380795924087,12.2340789659263,13.9300866608867,14.8163138213719,10.3497818745616,6.31991868581911,6.94839349209731,5.68326998791185,8.49215667395558,7.50483391939508,8.64297895012871,7.81257627431194,9.44468312387538,8.94749254746794,9.53389173476672,7.24338183778972,6.77238985729583,6.7469538464527,9.68588038066662,8.26901857367728,9.21059920779594,8.78200461164202,10.468100663309,51.5210373982112,14.7153595702377,51.5453301454725,17.7181879664575,13.650448034255,11.8440702648824,11.7269389803105,12.3026950020239,14.6769508937614,21.4954957507192,28.4717436926707,18.4462829290892,15.0801125280162,1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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=242557
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q3UYA5,Q811C2
|association_with_transcript=0bp_to_NM_001145967,uc012dhi.1_5end
|cluster_id=chr4:98860815..98860895,+
|description=CAGE_peak_1_at_Atg4c_5end
|id=chr4:98860815..98860895,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!2.22e-15!51;UBERON:0000033!2.69e-10!63;UBERON:0000955!3.93e-09!50;UBERON:0006238!3.93e-09!50;UBERON:0001049!7.28e-09!52;UBERON:0005068!7.28e-09!52;UBERON:0006241!7.28e-09!52;UBERON:0007135!7.28e-09!52;UBERON:0002616!1.03e-08!49;UBERON:0002020!2.32e-08!34;UBERON:0004121!1.04e-07!102;UBERON:0000924!1.04e-07!102;UBERON:0006601!1.04e-07!102;UBERON:0002346!1.33e-07!71;UBERON:0003075!1.33e-07!71;UBERON:0007284!1.33e-07!71;UBERON:0002021!1.87e-07!10;UBERON:0000411!1.87e-07!10;UBERON:0001950!1.87e-07!10;UBERON:0002791!2.08e-07!29;UBERON:0003528!2.08e-07!29;UBERON:0001893!2.08e-07!29;UBERON:0003056!3.03e-07!49;UBERON:0000073!4.35e-07!75;UBERON:0001016!4.35e-07!75;UBERON:0001017!5.75e-07!73;UBERON:0005743!5.75e-07!73
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.22e-15,51;UBERON:0000073,9.95e-10,54;UBERON:0010371,3.33e-09,73;UBERON:0002346,5.95e-09,64;UBERON:0003075,5.95e-09,64;UBERON:0007284,5.95e-09,64;UBERON:0001049,7.28e-09,52;UBERON:0005068,7.28e-09,52;UBERON:0006241,7.28e-09,52;UBERON:0007135,7.28e-09,52;UBERON:0004121,1.02e-08,95;UBERON:0000924,1.02e-08,95;UBERON:0006601,1.02e-08,95;UBERON:0002020,2.32e-08,34;UBERON:0000955,9.11e-08,47;UBERON:0006238,9.11e-08,47;UBERON:0002021,1.87e-07,10;UBERON:0000411,1.87e-07,10;UBERON:0001950,1.87e-07,10;UBERON:0003528,2.08e-07,29;UBERON:0002791,2.08e-07,29;UBERON:0001893,2.08e-07,29;UBERON:0002616,2.27e-07,46;UBERON:0003056,3.03e-07,49;UBERON:0001016,4.35e-07,75;UBERON:0001017,5.75e-07,73
|phase1_expression=15.2141404749554,12.563114675017,11.3749809847384,32.6661348211376,21.0376206577466,7.72244650794693,13.783145795136,1.67860320474049,0,0.234064526321993,1.54096171402954,1.11681022593471,2.56801094896809,2.71003247498892,7.99463428357591,7.89653542820321,5.59649502502517,13.0916798623669,14.8083588294198,15.2780274647291,15.818051968099,11.5177503393027,16.9779862940308,10.0795226359846,11.2410547722913,9.76194338995534,14.2151458732495,11.2045040996662,15.771943814879,13.3575968772763,7.09537634096975,7.62036808151557,7.99584223859941,31.6963362030877,13.5760261283099,11.3039558843775,14.2918549383658,7.95210098400125,8.5946887897618,12.0410461113974,8.2352408324342,8.19654581950135,14.5653105909346,4.65818226509636,4.66333883609767,4.03802854755699,7.82391344348039,9.3750817243592,8.34807494390993,11.2769341463084,8.11921245427103,4.31257693094915,5.70460860596304,2.90144856804538,1.00828139742739,6.17422646486273,8.88253663810146,4.64104883049698,13.7575193384526,11.1088105647127,15.2119536841483,3.72728985276045,4.4464739805557,9.44894703145469,11.8663963508037,6.3943210345149,5.39280198933128,4.61061966385865,10.9910989046986,10.3954572515402,9.46462326081219,16.5677570954206,17.2277461942259,11.8816075238505,12.8432931164437,13.7882817991503,40.7428759697738,36.7739533685341,34.5614699826548,13.8480602116704,13.7231465403614,12.5019208933622,36.0146068711781,34.3285192119325,31.4764390420229,15.9099436155781,15.5185132071022,17.1487490159277,11.4346551933108,16.1723138628521,16.8121403446973,25.8127163094416,3.39985666853875,22.1278308571505,27.9403859502498,30.9138552097162,11.6568868709354,5.45377032249785,3.89679006904303,4.59341446863442,14.084341977668,8.98285341900225,5.09610479413291,7.11066703153331,9.30911476348221,10.6411143499541,13.6491600153991,14.6155366040397,23.8222852955398,18.1099409659086,7.11289839741157,8.22056791442781,7.37969591219387,11.6056433225519,9.52468527799209,12.8179923156269,20.0227923864843,21.8345028949067,12.3845477272982,10.5148452465816,14.7963817368464,15.5160081003271,18.6391761218122,38.3542844085127,43.1460216035717,28.3557331281536,6.4700167233197,4.19931911695385,5.33694953706872,45.8359356578757,35.6850470198529,14.3245961408665,55.6237824615285,55.7459696980121,35.7395436642443,42.3449696606847,6.21220119486929,19.5318943857846,31.5903448042093,34.9333480771547,9.75903322220278,10.8053989083732,9.72335500948886,15.9747106905858,15.7164313039567,19.601399203582,15.554486276915,45.2730898793277,9.05385570317937,13.615637772083,15.8356011747554,9.86380795924087,12.2340789659263,13.9300866608867,14.8163138213719,10.3497818745616,6.31991868581911,6.94839349209731,5.68326998791185,8.49215667395558,7.50483391939508,8.64297895012871,7.81257627431194,9.44468312387538,8.94749254746794,9.53389173476672,7.24338183778972,6.77238985729583,6.7469538464527,9.68588038066662,8.26901857367728,9.21059920779594,8.78200461164202,10.468100663309,51.5210373982112,14.7153595702377,51.5453301454725,17.7181879664575,13.650448034255,11.8440702648824,11.7269389803105,12.3026950020239,14.6769508937614,21.4954957507192,28.4717436926707,18.4462829290892,15.0801125280162,17.3092130675801,26.9050440224386,30.5598598942435,24.2074615859658,28.6763433486289,5.69003702859245,8.45438993311993,14.6520056375005,10.1825663922657,9.89157684554891,11.8529535614638,16.6944458008039,16.2371162777562,24.1778040875717,19.9903405553317,25.791378556582,7.84171996865642,6.6830058338489,4.27238013531222,7.70868461276311,8.92355491083942,6.3656462945355,13.5217184601881,7.94462611197673,12.3552635934637,15.814502718009,18.2349064357567,19.9704110793319,24.5001511608698,23.1422663443267,30.3939418458921,19.0295785871603,11.1799932944586,11.4075483509418,9.16623463186016,11.2651319178481,10.5528942188344,10.4739201989846,10.9274842800367,16.3940549870439,13.730810758224,16.4238411717212,17.8611013040154,16.577758259126,15.6220983268033,10.5553898757491,16.86107619838,34.9152633843516,28.6974216156922,43.6697604766794,43.3683240391152,7.86887737808042,19.4402613947367,11.3582958989852,7.41833614163613,9.90947629570875,13.6212214832955,11.3627323782021,11.0399847007645,8.90583543684768,9.64444331107329,10.6727700045561,31.4894890093371,17.7425106510336,7.47875535402472,7.4928001302645,22.6009068472374,35.84118735179,9.71122544619926,7.25576536715402,12.6365403436452,8.85905678642318,16.2940628410282,16.0225541764297,12.3601468022352,12.83390562185,25.5989773928011,25.3004660579997,18.5643977846736,23.8307724027652,9.36317688962813,6.07985813778946,8.14480733120051,10.995094485821,8.20496560969525,14.8094118541909,4.87143918583359,19.477751769288,21.8187032989735,15.2164594657924,14.1802177529673,10.8181165886257,9.95163261314572,9.07229814423837,10.669158483429,26.2332752966866,52.4753604689742,12.4735742982432,8.46186158649212,9.63011542322501,6.96963290917357,7.10809984149331,9.83746144788047,8.49892149969276,6.01791244991729,7.18639863783004,15.2747298882418,9.17374381385292,11.5892096262304,11.1245501046455,9.61806161666556,9.38959024108564,10.519419018016,12.4806718145257,14.3965768091216,18.0164812875592,26.7175904627378,42.8406633399985,9.56905894681464,8.27292452285488,12.6393272423631,8.65370817300798,7.7719817725758,8.68443565978579,9.63512447845231,10.3810750981454,23.6752438409486,29.3790606383023,7.90027801570446,5.87903124341476,6.88163413004343,5.06691209613401,3.58053391334963,3.9736270956253,3.96644983415897,4.72606486958647,4.74542314756294,3.58171991278499,5.24296162711571,3.80085734885034,3.46362629905186,4.20756847853648,9.06921534460846,6.21560669447381,3.3194126945506,4.02923079273788,21.6372345316053,21.9588496277883,21.9781949120718,16.7207335681671,26.5833215138743,41.7916363536629,38.6673198666029,39.5297904273184,33.8550769217065,39.0497036269266,53.6329667146687,39.8263275136765,44.1314779159736,39.87653199061,53.8470724221893,8.30298780673413,10.3746467084268,12.2928196142977,11.1829089851415,12.157563432423,8.64064489715066,12.0013233012872,10.5077879191836,16.3668796891826,10.1078884705519,13.1809235942925,13.9583492625696,10.8624148665064,10.756225604018,12.4060612944125,10.4784612082276,10.6613579869267,9.83837024364896,9.06588981767275,14.7198920134397,9.94320831917705,11.3584515941976,10.4911923576821,14.0986024133359,12.1401100735776,13.2844934389932,11.7073902638574,9.47050961176234,10.3211126522855,10.661703161497,11.6262317761691,10.5399796141853,12.2769312950907,11.4653262477615,10.9956768259251,10.2422336954558,14.5037597236153,12.0327790267047,8.22539827896026,10.1472052794977,13.216466630364
|short_description=p1@Atg4c
}}

Latest revision as of 08:33, 27 September 2015

Short description:p1@Atg4c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Atg4c_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_001145967, uc012dhi.1_5end
EntrezGene:Atg4c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Atg4c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I332.67
CD326+ enterocyte, pool2.CNhs13197.11849-124I421.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.78
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.90
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A414.81
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A615.28
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.98
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.24
GP2+ M cell, pool1.CNhs13228.11845-124H99.76
GP2+ M cell, pool2.CNhs13231.11846-124I114.22
GP2+ M cell, pool3.CNhs13240.11847-124I211.20
Ileum epithelium, pool1.CNhs13199.10252-104B915.77
Ileum epithelium, pool2.CNhs13232.10253-104C113.36
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I37.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.38
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.35
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C313.76
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.99
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.23
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.84
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D340.74
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D734.56
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.72
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E436.01
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.48
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.91
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E117.15
Mouse Schwann, donor1.CNhs12507.11728-123D911.43
Mouse Schwann, donor2.CNhs12573.11746-123F916.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.81
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F725.81
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C822.13
Mouse hepatocyte, donor6.CNhs13090.11822-124F427.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F630.91
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.66
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.65
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.62
accessory axillary lymph node, adult.CNhs10475.1063-29H923.82
adrenal gland, adult.CNhs10508.49-24D718.11
adrenal gland, embryo E14.CNhs11038.406-44C57.11
adrenal gland, embryo E16.CNhs11004.1254-43D68.22
adrenal gland, embryo E17.CNhs11043.1263-45I17.38
adrenal gland, embryo E18.CNhs11026.1262-18F511.61
adrenal gland, neonate N00.CNhs11191.1311-23C19.52
adrenal gland, neonate N25.CNhs11223.1377-27I312.82
amnion, adult pregnant day17.5.CNhs10488.583-22A820.02
aorta, adult.CNhs10498.46-23H121.83
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F510.51
bone (os femoris), neonate N16.CNhs11225.1525-43A614.80
bone (os femoris), neonate N20.CNhs11195.1350-25C315.52
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B238.35
cerebellum, neonate N30.CNhs11135.1395-42I243.15
colon, adult.CNhs10468.36-18H728.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.47
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.34
corpora quadrigemina, adult.CNhs10501.16-22A445.84
corpus striatum, adult.CNhs10487.19-21D835.69
corpus striatum, neonate N00.CNhs11226.630-43F114.32
cortex, adult.CNhs10473.12-14D555.62
cortex, neonate N30.CNhs11107.1392-42F255.75
diencephalon, adult.CNhs10482.20-12F235.74
diencephalon, neonate N30.CNhs11201.1388-42B242.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.21
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.53
epididymis, adult.CNhs10490.58-23B231.59
eyeball, adult.CNhs10484.31-12G434.93
eyeball, embryo E12.CNhs11016.345-16C69.76
eyeball, embryo E14.CNhs10521.399-16E210.81
eyeball, embryo E15.CNhs10593.426-16C99.72
eyeball, embryo E17.CNhs11023.1261-18D415.97
eyeball, neonate N00.CNhs11207.633-15C615.72
eyeball, neonate N01.CNhs11140.1532-43E719.60
eyeball, neonate N02.CNhs11205.1551-44G815.55
eyeball, neonate N16.CNhs11188.777-19A245.27
forelimb, embryo E11.CNhs10596.335-25E29.05
forelimb, embryo E12.CNhs10600.359-14H213.62
forelimb, embryo E13.CNhs10589.384-1E215.84
forelimb, embryo E14.CNhs10577.413-26A89.86
forelimb, embryo E15.CNhs11007.437-20E712.23
forelimb, embryo E17.CNhs10598.1517-43C413.93
forelimb, embryo E18.CNhs11008.1520-43B514.82
gonad, embryo E13.CNhs11044.1564-45I610.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.68
heart, embryo E11.CNhs10586.331-24E98.49
heart, embryo E12.CNhs11015.353-12F57.50
heart, embryo E13.CNhs11013.376-3I98.64
heart, embryo E14.CNhs10597.403-26D47.81
heart, embryo E15.CNhs11017.431-16C89.44
heart, embryo E16.CNhs11021.457-17C68.95
heart, embryo E17.CNhs11025.479-18E59.53
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E36.77
heart, neonate N03.CNhs11221.1349-25I26.75
heart, neonate N10.CNhs11118.749-24G19.69
heart, neonate N16.CNhs11209.782-15G18.27
heart, neonate N20.CNhs11127.821-26I69.21
heart, neonate N25.CNhs11196.1351-25D38.78
heart, neonate N30.CNhs11202.1390-42D210.47
hippocampus, adult.CNhs10478.13-16E851.52
hippocampus, neonate N00.CNhs11228.627-43G114.72
intestinal mucosa, adult.CNhs10506.860-29I351.55
intestine, adult.CNhs10496.178-9A317.72
intestine, embryo E12.CNhs11019.1251-16I513.65
intestine, embryo E13.CNhs11010.381-16D511.84
intestine, embryo E15.CNhs10602.976-16D811.73
intestine, embryo E16.CNhs10585.463-22H412.30
intestine, embryo E17.CNhs10582.482-18D314.68
intestine, embryo E18.CNhs10526.1289-20F721.50
intestine, neonate N00.CNhs11126.644-26D128.47
intestine, neonate N01.CNhs11192.1322-23E918.45
intestine, neonate N06.CNhs11102.688-20B815.08
intestine, neonate N07.CNhs11095.720-20F217.31
intestine, neonate N10.CNhs11098.755-23A526.91
intestine, neonate N20.CNhs11187.827-18D130.56
intestine, neonate N25.CNhs11121.1352-25E324.21
intestine, neonate N30.CNhs11131.1384-42G128.68
kidney, embryo E14.CNhs10606.411-4I95.69
kidney, embryo E15.CNhs10997.434-16F88.45
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I210.18
kidney, embryo E18.CNhs11001.1288-20C79.89
kidney, neonate N00.CNhs11214.646-21G711.85
kidney, neonate N10.CNhs11206.758-6D516.69
kidney, neonate N20.CNhs11113.832-19I116.24
kidney, neonate N25.CNhs11122.1353-25F324.18
kidney, neonate N30.CNhs11203.1385-42H119.99
liver, adult pregnant day01.CNhs10466.508-5B225.79
liver, embryo E12.CNhs10601.355-15F87.84
liver, embryo E13.CNhs10524.378-3H66.68
liver, embryo E14.CNhs10594.409-16E14.27
liver, embryo E15.CNhs10520.433-16D77.71
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A36.37
liver, embryo E18.CNhs10579.499-43G413.52
liver, neonate N00.CNhs11117.641-24F47.94
liver, neonate N03.CNhs11123.1345-25G212.36
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H218.23
liver, neonate N10.CNhs11115.751-24B919.97
liver, neonate N20.CNhs11220.823-25A324.50
liver, neonate N25.CNhs11198.1368-26H123.14
liver, neonate N30.CNhs11106.1382-42D130.39
lung, adult.CNhs10474.28-22B119.03
lung, embryo E12.CNhs10522.354-16G211.18
lung, embryo E14.CNhs10604.404-26F811.41
lung, embryo E15.CNhs11020.432-17C59.17
lung, embryo E16.CNhs10998.458-17B611.27
lung, embryo E17.CNhs10605.480-44A610.55
lung, embryo E18.CNhs10583.1287-20I610.47
lung, neonate N00.CNhs11224.640-42C610.93
lung, neonate N06.CNhs11212.683-20E516.39
lung, neonate N07.CNhs11111.715-19A313.73
lung, neonate N10.CNhs11219.750-23E616.42
lung, neonate N20.CNhs11109.822-18A417.86
lung, neonate N25.CNhs11119.1359-25C716.58
lung, neonate N30.CNhs11133.1394-42H215.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.86
mammary gland, adult lactating day02.CNhs10480.595-22B634.92
mammary gland, adult pregnant day19.CNhs10476.588-5H228.70
medulla oblongata, adult.CNhs10477.17-12C243.67
medulla oblongata, neonate N30.CNhs11200.1396-42A343.37
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.44
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.91
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.62
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.67
olfactory brain, adult.CNhs10489.18-22I931.49
ovary, adult.CNhs10507.91-2I717.74
ovary, embryo E18.CNhs11040.505-44H77.48
ovary, neonate N00.CNhs11217.1299-22I47.49
oviduct, adult pregnant day01.CNhs10500.988-6G622.60
pancreas, adult.CNhs10486.34-16E435.84
pancreas, embryo E14.CNhs11012.405-44F49.71
pancreas, embryo E15.CNhs11042.1556-45F27.26
pancreas, embryo E16.CNhs11003.460-26E512.64
pancreas, embryo E17.CNhs10599.1558-45G38.86
pancreas, embryo E18.CNhs10580.1535-43I716.29
pancreas, neonate N00.CNhs11105.645-26G916.02
pancreas, neonate N01.CNhs11138.1531-43D712.36
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B625.60
pancreas, neonate N25.CNhs11094.1555-45E225.30
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G823.83
pituitary gland, embryo E12.CNhs11018.346-16E69.36
pituitary gland, embryo E13.CNhs11009.370-44C76.08
pituitary gland, embryo E14.CNhs11037.398-44A58.14
pituitary gland, embryo E15.CNhs10592.427-16B911.00
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F514.81
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I719.48
placenta, adult pregnant day17.CNhs10464.577-18G321.82
prostate, adult.CNhs10470.859-1F815.22
skin, adult.CNhs10492.30-1C314.18
skin, neonate N00.CNhs11124.650-25G410.82
skin, neonate N03.CNhs11215.662-22H39.95
skin, neonate N06.CNhs11097.693-20I59.07
skin, neonate N10.CNhs11108.762-6C410.67
small intestine, neonate N16.CNhs11114.790-21I126.23
spinal cord, adult.CNhs10505.24-13C952.48
spleen, adult.CNhs10465.25-2G212.47
spleen, embryo E16.CNhs11035.461-43C18.46
spleen, embryo E18.CNhs11011.1271-21F29.63
spleen, neonate N10.CNhs11116.752-24D16.97
spleen, neonate N20.CNhs11112.824-19H17.11
spleen, neonate N25.CNhs11099.1354-25G39.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.19
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E39.17
stomach, embryo E15.CNhs10603.1252-16G811.59
stomach, embryo E16.CNhs11022.459-17D411.12
stomach, embryo E17.CNhs11006.1035-18D59.62
stomach, embryo E18.CNhs10999.1286-20C69.39
stomach, neonate N03.CNhs11193.1340-24B810.52
stomach, neonate N07.CNhs11210.718-18A912.48
stomach, neonate N25.CNhs11104.1355-25E414.40
stomach, neonate N30.CNhs11134.1386-42I118.02
submandibular gland, adult.CNhs10469.59-29C126.72
testis, adult.CNhs10504.57-7G542.84
testis, embryo E13.CNhs11031.389-23F59.57
testis, embryo E15.CNhs11034.443-27C58.27
testis, embryo E16.CNhs11033.470-26G512.64
testis, embryo E17.CNhs11029.486-18I58.65
testis, embryo E18.CNhs11027.503-18G57.77
testis, neonate N00.CNhs11189.1300-22B78.68
testis, neonate N07.CNhs11222.726-26I49.64
testis, neonate N10.CNhs11204.763-44D910.38
testis, neonate N20.CNhs11110.839-18H323.68
testis, neonate N30.CNhs11130.1391-42E229.38
thymus, adult.CNhs10471.38-12B57.90
thymus, embryo E14.CNhs11041.402-44I45.88
thymus, embryo E15.CNhs11005.430-45I26.88
thymus, embryo E16.CNhs11002.456-26C55.07
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F83.97
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C44.75
thymus, neonate N07.CNhs11211.713-19D33.58
thymus, neonate N10.CNhs11194.748-24E45.24
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G73.46
thymus, neonate N30.CNhs11132.1393-42G24.21
tongue, adult.CNhs10499.32-1B49.07
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.32
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E421.64
uterus, adult pregnant day19.CNhs10497.590-15F521.96
uterus, adult.CNhs10509.92-27E521.98
vagina, adult.CNhs10502.89-27D516.72
vesicular gland, adult.CNhs10491.51-27F826.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A141.79
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A238.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A339.53
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D733.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.05
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A553.63
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A639.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A744.13
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A839.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A953.85
whole body, embryo E11.CNhs11014.324-5I88.30
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H212.29
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B112.16
whole body, embryo E16.CNhs10514.453-14F28.64
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.18
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.86
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.76
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.84
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.49
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.47
whole body, embryo E17.5.CNhs10513.490-9F911.00
whole body, embryo E17.CNhs10517.475-3I510.24
whole body, embryo E18.CNhs10516.493-3B314.50
whole body, neonate N00.CNhs10525.657-19C212.03
whole body, neonate N01.CNhs10576.659-23C68.23
whole body, neonate N06.CNhs10515.692-21D110.15
whole body, neonate N10.CNhs10518.761-6B413.22





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism2.22e-1551
regional part of nervous system9.95e-1054
ecto-epithelium3.33e-0973
neurectoderm5.95e-0964
neural plate5.95e-0964
presumptive neural plate5.95e-0964
neural tube7.28e-0952
neural rod7.28e-0952
future spinal cord7.28e-0952
neural keel7.28e-0952
ectoderm-derived structure1.02e-0895
ectoderm1.02e-0895
presumptive ectoderm1.02e-0895
gray matter2.32e-0834
brain9.11e-0847
future brain9.11e-0847
occipital lobe1.87e-0710
visual cortex1.87e-0710
neocortex1.87e-0710
brain grey matter2.08e-0729
regional part of telencephalon2.08e-0729
telencephalon2.08e-0729
regional part of brain2.27e-0746
pre-chordal neural plate3.03e-0749
nervous system4.35e-0775
central nervous system5.75e-0773
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