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FFCP PHASE1:Mm9::chr4:98860587..98860626,+: Difference between revisions

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{{FFCP|EntrezGene=242557|HGNC=|UniProt=Q811C2,Q3UYA5|association_with_transcript=0bp_to_ENSMUST00000030279,NM_175029,uc008tut.1,uc008tuu.1_5end|description=CAGE_peak_2_at_Atg4c_5end|id=chr4:98860587..98860626,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.65e-17!71;UBERON:0003075!1.65e-17!71;UBERON:0007284!1.65e-17!71;UBERON:0004121!2.20e-16!102;UBERON:0000924!2.20e-16!102;UBERON:0006601!2.20e-16!102;UBERON:0000033!1.84e-15!63;UBERON:0000073!3.63e-14!75;UBERON:0001016!3.63e-14!75;UBERON:0001017!5.50e-14!73;UBERON:0005743!5.50e-14!73;UBERON:0001049!1.14e-13!52;UBERON:0005068!1.14e-13!52;UBERON:0006241!1.14e-13!52;UBERON:0007135!1.14e-13!52;UBERON:0000955!7.44e-13!50;UBERON:0006238!7.44e-13!50;UBERON:0002616!1.68e-12!49;UBERON:0004111!2.10e-11!122;UBERON:0003056!7.48e-11!49;UBERON:0000025!1.55e-10!114;UBERON:0000468!3.53e-10!333;UBERON:0003080!5.12e-09!40;UBERON:0002020!1.40e-08!34;UBERON:0002780!1.68e-08!39;UBERON:0001890!1.68e-08!39;UBERON:0006240!1.68e-08!39;UBERON:0002791!3.52e-07!29;UBERON:0003528!3.52e-07!29;UBERON:0001893!3.52e-07!29;UBERON:0000922!5.78e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.56e-17,92;UBERON:0002346,2.74e-16,64;UBERON:0003075,2.74e-16,64;UBERON:0007284,2.74e-16,64;UBERON:0010371,1.45e-15,73;UBERON:0004121,8.84e-15,95;UBERON:0000924,8.84e-15,95;UBERON:0006601,8.84e-15,95;UBERON:0001016,2.20e-14,75;UBERON:0000073,2.22e-14,54;UBERON:0001017,3.36e-14,73;UBERON:0001049,5.46e-14,52;UBERON:0005068,5.46e-14,52;UBERON:0006241,5.46e-14,52;UBERON:0007135,5.46e-14,52;UBERON:0000955,3.52e-12,47;UBERON:0006238,3.52e-12,47;UBERON:0002616,7.94e-12,46;UBERON:0004111,2.18e-11,122;UBERON:0003056,4.05e-11,49;UBERON:0000025,1.51e-10,114;UBERON:0003080,2.95e-09,40;UBERON:0002020,8.07e-09,34;UBERON:0002780,9.95e-09,39;UBERON:0001890,9.95e-09,39;UBERON:0006240,9.95e-09,39;UBERON:0003528,2.15e-07,29;UBERON:0002791,2.15e-07,29;UBERON:0001893,2.15e-07,29|phase1_expression=4.96461426024861,0.348975407639361,0,2.11724947914781,2.50447864973174,1.17515490338323,0.700837921786577,0.129123323441576,0,0,0,0,0,0.262261207256992,0.999329285446988,0.404950534779652,2.79824751251259,0.630924330716475,0.685572168028694,0.42438965179803,1.44573593256819,1.09220046320974,0.522399578277871,0.47997726838022,1.14704640533585,0.57423196411502,0.430761996159075,0.646413698057667,0.570070258369122,1.00812051903972,0.886922042621219,0.635030673459631,1.23012957516914,0,0.866554859253824,0.498703936075477,1.63335485009895,0.837063261473815,0,0,1.17646297606203,0,0.485510353031154,2.64383317748712,2.53442328048786,0.550640256485045,3.9119567217402,2.61630187656536,1.09843091367236,2.13872888981712,1.81982348112971,1.43752564364972,0.167782606057736,0,0.336093799142464,1.02903774414379,1.43266719969378,2.06268836910977,2.22548106945558,3.1739458756322,2.53532561402472,1.0165335962074,1.77858959222228,1.3498495759221,0.988866362566974,2.1314403448383,0.599200221036809,2.68952813725088,2.90330914463737,3.10513658162888,3.36519938162211,2.57085885963423,2.65042249141936,1.95985278743926,2.39613677545591,0,2.20231761998777,4.08599481872601,4.6081959976873,2.50583946687368,2.47016637726506,3.12548022334056,3.90856198601933,3.93933827022176,3.66715794664344,4.12480019663135,3.70166370077668,2.98239113320481,2.34751199332871,2.56943304363071,3.18850937571846,0.860423876981386,0,4.85732872474035,0.649776417447669,2.24013443548668,0.842666520790511,1.87473354835864,1.29893002301434,1.41335829804136,3.38024207464033,2.56652954828636,2.54805239706646,0,0.649473123033642,0.253359865475099,0,1.02765491747154,1.29468941823586,4.15637989381509,1.56136794089522,2.13125834818499,3.68984795609694,3.46662073271032,2.93971767839262,2.89033160058254,0.741584903203122,2.89198713839823,2.65383165584962,2.26473589926373,1.10420759230197,1.45462575940567,0,4.39171195517321,3.14170060220183,0.766371165625774,0.11981512450592,0,0.127070227073065,5.09288173976397,8.23501085073528,3.64397621127307,5.9100268865374,4.85859368927628,4.36354893575076,5.19172041816825,2.03678727700633,2.36373244159177,8.59257378674494,2.52530227063769,3.25301107406759,1.60931473103431,2.16074555766419,2.26057226753573,4.21826294738233,3.45907044769094,3.65436725782942,5.69147415625834,1.72454394346274,3.02569728268511,3.51902248327898,1.97276159184817,5.28289773528636,5.92028683087683,5.76189981942242,2.18937693500343,0,0.257347907114715,0.568326998791185,0.828503090142008,1.87620847984877,1.80062061461015,2.3674473558521,2.16440654922144,1.85120535464854,2.55787339225449,3.75582761959467,2.45207218971056,1.6455984991348,2.62667942526552,2.1888578577381,1.90059983652932,2.41505126820156,1.8788898626452,5.88811855979556,6.17427674275707,0.660837565967596,0.528901133327089,1.70630600428187,4.41249676534833,2.44848176511977,2.01683524623343,1.77902435075896,1.14135375667535,0.949058123089023,1.15289268306808,1.50801125280162,0.795825888164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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=242557
|HGNC=
|TSSclassifier=NA
|UniProt=Q811C2,Q3UYA5
|association_with_transcript=0bp_to_ENSMUST00000030279,NM_175029,uc008tut.1,uc008tuu.1_5end
|cluster_id=chr4:98860587..98860626,+
|description=CAGE_peak_2_at_Atg4c_5end
|id=chr4:98860587..98860626,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.65e-17!71;UBERON:0003075!1.65e-17!71;UBERON:0007284!1.65e-17!71;UBERON:0004121!2.20e-16!102;UBERON:0000924!2.20e-16!102;UBERON:0006601!2.20e-16!102;UBERON:0000033!1.84e-15!63;UBERON:0000073!3.63e-14!75;UBERON:0001016!3.63e-14!75;UBERON:0001017!5.50e-14!73;UBERON:0005743!5.50e-14!73;UBERON:0001049!1.14e-13!52;UBERON:0005068!1.14e-13!52;UBERON:0006241!1.14e-13!52;UBERON:0007135!1.14e-13!52;UBERON:0000955!7.44e-13!50;UBERON:0006238!7.44e-13!50;UBERON:0002616!1.68e-12!49;UBERON:0004111!2.10e-11!122;UBERON:0003056!7.48e-11!49;UBERON:0000025!1.55e-10!114;UBERON:0000468!3.53e-10!333;UBERON:0003080!5.12e-09!40;UBERON:0002020!1.40e-08!34;UBERON:0002780!1.68e-08!39;UBERON:0001890!1.68e-08!39;UBERON:0006240!1.68e-08!39;UBERON:0002791!3.52e-07!29;UBERON:0003528!3.52e-07!29;UBERON:0001893!3.52e-07!29;UBERON:0000922!5.78e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.56e-17,92;UBERON:0002346,2.74e-16,64;UBERON:0003075,2.74e-16,64;UBERON:0007284,2.74e-16,64;UBERON:0010371,1.45e-15,73;UBERON:0004121,8.84e-15,95;UBERON:0000924,8.84e-15,95;UBERON:0006601,8.84e-15,95;UBERON:0001016,2.20e-14,75;UBERON:0000073,2.22e-14,54;UBERON:0001017,3.36e-14,73;UBERON:0001049,5.46e-14,52;UBERON:0005068,5.46e-14,52;UBERON:0006241,5.46e-14,52;UBERON:0007135,5.46e-14,52;UBERON:0000955,3.52e-12,47;UBERON:0006238,3.52e-12,47;UBERON:0002616,7.94e-12,46;UBERON:0004111,2.18e-11,122;UBERON:0003056,4.05e-11,49;UBERON:0000025,1.51e-10,114;UBERON:0003080,2.95e-09,40;UBERON:0002020,8.07e-09,34;UBERON:0002780,9.95e-09,39;UBERON:0001890,9.95e-09,39;UBERON:0006240,9.95e-09,39;UBERON:0003528,2.15e-07,29;UBERON:0002791,2.15e-07,29;UBERON:0001893,2.15e-07,29
|phase1_expression=4.96461426024861,0.348975407639361,0,2.11724947914781,2.50447864973174,1.17515490338323,0.700837921786577,0.129123323441576,0,0,0,0,0,0.262261207256992,0.999329285446988,0.404950534779652,2.79824751251259,0.630924330716475,0.685572168028694,0.42438965179803,1.44573593256819,1.09220046320974,0.522399578277871,0.47997726838022,1.14704640533585,0.57423196411502,0.430761996159075,0.646413698057667,0.570070258369122,1.00812051903972,0.886922042621219,0.635030673459631,1.23012957516914,0,0.866554859253824,0.498703936075477,1.63335485009895,0.837063261473815,0,0,1.17646297606203,0,0.485510353031154,2.64383317748712,2.53442328048786,0.550640256485045,3.9119567217402,2.61630187656536,1.09843091367236,2.13872888981712,1.81982348112971,1.43752564364972,0.167782606057736,0,0.336093799142464,1.02903774414379,1.43266719969378,2.06268836910977,2.22548106945558,3.1739458756322,2.53532561402472,1.0165335962074,1.77858959222228,1.3498495759221,0.988866362566974,2.1314403448383,0.599200221036809,2.68952813725088,2.90330914463737,3.10513658162888,3.36519938162211,2.57085885963423,2.65042249141936,1.95985278743926,2.39613677545591,0,2.20231761998777,4.08599481872601,4.6081959976873,2.50583946687368,2.47016637726506,3.12548022334056,3.90856198601933,3.93933827022176,3.66715794664344,4.12480019663135,3.70166370077668,2.98239113320481,2.34751199332871,2.56943304363071,3.18850937571846,0.860423876981386,0,4.85732872474035,0.649776417447669,2.24013443548668,0.842666520790511,1.87473354835864,1.29893002301434,1.41335829804136,3.38024207464033,2.56652954828636,2.54805239706646,0,0.649473123033642,0.253359865475099,0,1.02765491747154,1.29468941823586,4.15637989381509,1.56136794089522,2.13125834818499,3.68984795609694,3.46662073271032,2.93971767839262,2.89033160058254,0.741584903203122,2.89198713839823,2.65383165584962,2.26473589926373,1.10420759230197,1.45462575940567,0,4.39171195517321,3.14170060220183,0.766371165625774,0.11981512450592,0,0.127070227073065,5.09288173976397,8.23501085073528,3.64397621127307,5.9100268865374,4.85859368927628,4.36354893575076,5.19172041816825,2.03678727700633,2.36373244159177,8.59257378674494,2.52530227063769,3.25301107406759,1.60931473103431,2.16074555766419,2.26057226753573,4.21826294738233,3.45907044769094,3.65436725782942,5.69147415625834,1.72454394346274,3.02569728268511,3.51902248327898,1.97276159184817,5.28289773528636,5.92028683087683,5.76189981942242,2.18937693500343,0,0.257347907114715,0.568326998791185,0.828503090142008,1.87620847984877,1.80062061461015,2.3674473558521,2.16440654922144,1.85120535464854,2.55787339225449,3.75582761959467,2.45207218971056,1.6455984991348,2.62667942526552,2.1888578577381,1.90059983652932,2.41505126820156,1.8788898626452,5.88811855979556,6.17427674275707,0.660837565967596,0.528901133327089,1.70630600428187,4.41249676534833,2.44848176511977,2.01683524623343,1.77902435075896,1.14135375667535,0.949058123089023,1.15289268306808,1.50801125280162,0.795825888164603,2.53453313254856,0,0.864552199498777,1.7922714592893,0.569003702859245,1.82797620175566,3.38123207019241,2.24016460629846,1.74557238450863,1.68325967736765,2.52946148497029,1.91893192373483,1.8839847340965,2.09775178667061,2.37162101669719,1.33476084572875,1.76903095601883,0,1.01430060694251,2.41177159752417,0.763877555344259,1.72617682470486,0.810676133875177,3.84385978463314,1.43768206527355,3.72140947668503,3.12037673114561,3.53610429125956,1.61457672169721,4.3419916922703,1.66277871149944,1.89491411770485,2.77040459951444,1.86719594352707,1.64283173801951,2.01007508930179,2.85652369063216,1.17080188714679,3.31033802623001,2.21464689648775,2.23236676120482,1.63863314715738,1.72684981865896,2.31438493730419,0,1.63171705145613,0.491764273019036,2.48343071674259,5.13761887960934,5.39173758324135,2.78689407140348,1.76729649043061,1.26203287766503,3.12350995437311,3.44677436372478,2.38968797952552,1.78238939265915,2.26461224631066,2.42886421004937,0.584511715822624,1.58115111178609,3.21321316421807,1.98716119291576,2.84904965867608,3.58351310577867,2.63952196756057,1.32745138339963,1.94224508923985,2.72091201268276,1.32023555829129,0.885905678642318,1.53717573971964,1.29214146584111,2.90826983582004,1.78248689192361,1.8962205476149,2.10837217149998,0,2.7235168460303,2.70091641046965,1.16422815404479,2.57204442037911,2.83744373827638,3.0322698992352,3.1264313914403,1.2178597964584,1.17335854031855,2.96564899209348,2.42581237860458,1.97863503529776,1.77610869365496,1.93001359770099,1.67121281604391,1.96969079694074,1.1659233465194,5.56275906031529,1.02522528478712,1.857481811669,1.11116716421827,0.753473828018764,0.956859594047176,0.228778173206523,0.169978429993855,0.839708713941948,0.552799895217695,0,1.73984796469624,2.43983360552218,2.70013352054503,2.92723614420256,2.62035076495413,1.88810084938749,2.72756403893609,1.04702376793612,1.42576470620972,0.621339313086926,0,2.39226473670366,2.81279433777066,2.13896307178452,2.58319646955462,3.21016638432478,2.93393096614385,1.95306577265925,1.8874681996628,0.966336483304024,1.15212002503146,1.26404448251271,2.02725215290164,1.33524244314275,0.649604114888975,1.79026695667481,1.19208812868759,0.961563596159751,0.443068581523732,0.201932899896295,0.228620419965,0.403304740547362,0.292373642219257,0.192423683280659,0.818138315270983,3.40095575422817,2.21985953374065,0.448569283047378,0.503653849092235,2.31827512838629,2.25218970541418,2.93042598827624,2.57242054894879,1.50471631210609,5.0827665835536,4.14292712856459,4.58316410751517,3.43706364687375,4.11049511862385,1.5107877947794,4.72515750162264,2.2516060161211,1.35942722695261,5.1776031175182,1.14166082342594,2.79317411380722,2.56100408631201,2.43106717068294,0.838452650511929,2.02227859295016,3.11145418922261,3.29656091582231,3.53011130550997,3.79045817645696,1.01391719956096,1.32038438970253,2.90288673156635,2.30490548657529,2.46972516509137,0.952587382566147,2.20180219295225,2.70072908649187,3.29668720642645,2.64958056241915,2.74295401908332,1.59728225543404,1.43061713968393,2.0348498328526,2.72917203204459,2.96151127620868,3.10977553883713,1.31534855718921,2.03706170768793,1.12228454331548,2.13543032623513,3.34915240076916,3.6830793885272,1.54936841185966,2.89359916471712,3.74715866906919,1.63752125911786,1.71896843238639,3.44318997723918,3.52946270591225,3.01428186306548
|short_description=p2@Atg4c
}}

Latest revision as of 08:32, 27 September 2015

Short description:p2@Atg4c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Atg4c_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000030279, NM_175029, uc008tut.1, uc008tuu.1_5end
EntrezGene:Atg4c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Atg4c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D92.35
Mouse Schwann, donor2.CNhs12573.11746-123F92.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D74.16
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C12.94
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B28.59
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C63.25
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C64.22
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G12.19
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E85.89
hippocampus, neonate N00.CNhs11228.627-43G16.17
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D52.53
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.93
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A92.73
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest2.56e-1792
neurectoderm2.74e-1664
neural plate2.74e-1664
presumptive neural plate2.74e-1664
ecto-epithelium1.45e-1573
ectoderm-derived structure8.84e-1595
ectoderm8.84e-1595
presumptive ectoderm8.84e-1595
nervous system2.20e-1475
regional part of nervous system2.22e-1454
central nervous system3.36e-1473
neural tube5.46e-1452
neural rod5.46e-1452
future spinal cord5.46e-1452
neural keel5.46e-1452
brain3.52e-1247
future brain3.52e-1247
regional part of brain7.94e-1246
anatomical conduit2.18e-11122
pre-chordal neural plate4.05e-1149
tube1.51e-10114
anterior neural tube2.95e-0940
gray matter8.07e-0934
regional part of forebrain9.95e-0939
forebrain9.95e-0939
future forebrain9.95e-0939
brain grey matter2.15e-0729
regional part of telencephalon2.15e-0729
telencephalon2.15e-0729
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