FFCP PHASE1:Hg19::chr8:52721907..52721937,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=137902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26359 | |||
|TSSclassifier=strong | |||
|UniProt=A1KZ92 | |||
|association_with_transcript=67bp_to_ENST00000356297,ENST00000543296,NM_144651,uc003xqu.3_5end | |||
|cluster_id=chr8:52721907..52721937,- | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_2_at_PXDNL_5end | |||
|id=chr8:52721907..52721937,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000062;4.67e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,5.29e-10,11;CL:0000375,5.29e-10,11;CL:0000335,5.29e-10,11 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.15e-26;1!UBERON:0010227;7.62e-26;1!UBERON:0005062;1.62e-25;4!UBERON:0007284;1.62e-25;4!CL:0000335;4.83e-10;11 | |||
|ontology_enrichment_disease=DOID:114!1.47e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:114;7.77e-14;2!DOID:1287;1.44e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.28e-14,2;DOID:1287,1.49e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.78e-22!115;UBERON:0002619!5.81e-15!22;UBERON:0003978!6.91e-14!3;UBERON:0009751!6.91e-14!3;UBERON:0000946!6.91e-14!3;UBERON:0002523!6.91e-14!3;UBERON:0005983!6.91e-14!3;UBERON:0002165!6.91e-14!3;UBERON:0002062!6.91e-14!3;UBERON:0007280!6.91e-14!3;UBERON:0001950!2.23e-13!20;UBERON:0000956!5.08e-13!25;UBERON:0000203!5.08e-13!25;UBERON:0001869!5.64e-12!32;UBERON:0002020!3.38e-11!34;UBERON:0003528!3.38e-11!34;UBERON:0001893!3.61e-11!34;UBERON:0003075!1.74e-10!86;UBERON:0007284!1.74e-10!86;UBERON:0000200!1.79e-10!6;UBERON:0002346!7.51e-10!90;UBERON:0002133!8.13e-10!2;UBERON:0002081!8.48e-10!2;UBERON:0002791!1.60e-09!33;UBERON:0000341!2.87e-09!2;UBERON:0007100!5.21e-09!27;UBERON:0002780!5.89e-09!41;UBERON:0001890!5.89e-09!41;UBERON:0006240!5.89e-09!41;UBERON:0003080!1.06e-08!42;UBERON:0000153!2.48e-08!129;UBERON:0007811!2.48e-08!129;UBERON:0001871!5.02e-08!7;UBERON:0003056!7.83e-08!61;UBERON:0001049!3.85e-07!57;UBERON:0005068!3.85e-07!57;UBERON:0006241!3.85e-07!57;UBERON:0007135!3.85e-07!57;UBERON:0002616!7.91e-07!59;UBERON:0004151!8.73e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.27e-33;3!UBERON:0000946;1.27e-33;3!UBERON:0002079;7.62e-26;1!UBERON:0002135;7.62e-26;1!UBERON:0002146;7.62e-26;1!UBERON:0005623;7.62e-26;1!UBERON:0007100;2.97e-16;25!UBERON:0002081;1.21e-13;2!UBERON:0002133;1.21e-13;2!UBERON:0010313;7.67e-11;10!UBERON:0000948;9.07e-11;22!UBERON:0004151;1.53e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.27e-33,3;UBERON:0009751,1.27e-33,3;UBERON:0000946,1.27e-33,3;UBERON:0002523,1.27e-33,3;UBERON:0005983,1.27e-33,3;UBERON:0002165,1.27e-33,3;UBERON:0002062,1.27e-33,3;UBERON:0007280,1.27e-33,3;UBERON:0002135,5.93e-26,1;UBERON:0002079,7.62e-26,1;UBERON:0002146,9.79e-26,1;UBERON:0005623,9.79e-26,1;UBERON:0007100,4.43e-15,27;UBERON:0004797,4.69e-15,7;UBERON:0002133,1.07e-13,2;UBERON:0002081,1.21e-13,2;UBERON:0010227,1.21e-13,2;UBERON:0010313,7.67e-11,10;UBERON:0002342,7.67e-11,10;UBERON:0005062,7.67e-11,10;UBERON:0000948,6.29e-10,24;UBERON:0005498,6.29e-10,24;UBERON:0004140,6.29e-10,24;UBERON:0009881,6.29e-10,24;UBERON:0004141,6.29e-10,24;UBERON:0003084,6.29e-10,24;UBERON:0007005,6.29e-10,24;UBERON:0004139,6.29e-10,24;UBERON:0004291,6.29e-10,24;UBERON:0004151,1.54e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28197250745681,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80784592624426,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,1.3749625440701,0.717873024576814,0.199679000498991,2.14613024068285,0.669514372325618,0.873385142327441,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0.179287339332845,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0,0,0,0.322951291263702,0,0,0,0,0,0,0,8.15556510676726,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0.124149428591716,0,0,0.202117188958219,0.435433495793923,0.684466602170562,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | |||
|short_description=p2@PXDNL | |||
}} |
Latest revision as of 11:01, 18 September 2015
Short description: | p2@PXDNL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PXDNL_5end |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | 67bp_to_ENST00000356297, ENST00000543296, NM_144651, uc003xqu.3_5end |
EntrezGene: | PXDNL |
HGNC: | 26359 |
UniProt: | A1KZ92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 5.29e-10 | 11 |
osteoprogenitor cell | 5.29e-10 | 11 |
mesenchyme condensation cell | 5.29e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
valve | 1.27e-33 | 3 |
cardiac mesenchyme | 1.27e-33 | 3 |
cardial valve | 1.27e-33 | 3 |
tunica intima | 1.27e-33 | 3 |
heart layer | 1.27e-33 | 3 |
endocardium | 1.27e-33 | 3 |
endocardial cushion | 1.27e-33 | 3 |
presumptive endocardium | 1.27e-33 | 3 |
mitral valve | 5.93e-26 | 1 |
left cardiac atrium | 7.62e-26 | 1 |
pulmonary valve | 9.79e-26 | 1 |
semi-lunar valve | 9.79e-26 | 1 |
primary circulatory organ | 4.43e-15 | 27 |
blood vessel layer | 4.69e-15 | 7 |
atrioventricular valve | 1.07e-13 | 2 |
cardiac atrium | 1.21e-13 | 2 |
future cardiac atrium | 1.21e-13 | 2 |
neural crest-derived structure | 7.67e-11 | 10 |
neural crest | 7.67e-11 | 10 |
neural fold | 7.67e-11 | 10 |
heart | 6.29e-10 | 24 |
primitive heart tube | 6.29e-10 | 24 |
primary heart field | 6.29e-10 | 24 |
anterior lateral plate mesoderm | 6.29e-10 | 24 |
heart tube | 6.29e-10 | 24 |
heart primordium | 6.29e-10 | 24 |
cardiac mesoderm | 6.29e-10 | 24 |
cardiogenic plate | 6.29e-10 | 24 |
heart rudiment | 6.29e-10 | 24 |
cardiac chamber | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.28e-14 | 2 |
cardiovascular system disease | 1.49e-07 | 4 |