FFCP PHASE1:Mm9::chr4:68615448..68615457,-: Difference between revisions
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{{FFCP|EntrezGene=56710|HGNC=|MCL_coexpression_id=2|UniProt=Q920P3|association_with_transcript=-17bp_to_ENSMUST00000030036,NM_019967,uc008thw.1,uc008thx.1_5end|description=CAGE_peak_3_at_Dbc1_5end|id=chr4:68615448..68615457,-|ontology_enrichment_celltype=CL:0000117!1.04e-13!23;CL:0000337!1.04e-13!23;CL:0000540!7.43e-10!33;CL:0000047!7.43e-10!33;CL:0000031!7.43e-10!33;CL:0000404!7.43e-10!33;CL:0000393!6.28e-08!39;CL:0000211!6.28e-08!39;CL:0000221!5.57e-07!44;CL:0000133!5.57e-07!44;CL:0002319!8.42e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,7.32e-23,23;CL:0000337,7.32e-23,23;CL:0000540,1.00e-14,33;CL:0000047,1.00e-14,33;CL:0000031,1.00e-14,33;CL:0000404,1.00e-14,33;CL:0000393,7.33e-12,39;CL:0000211,7.33e-12,39;CL:0002319,2.12e-10,43;CL:0000221,4.45e-10,44;CL:0000133,4.45e-10,44;CL:0002614,2.65e-07,3;CL:0002610,5.06e-07,3;CL:0002612,7.85e-07,3;CL:0002613,9.98e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.01e-26!52;UBERON:0005068!9.01e-26!52;UBERON:0006241!9.01e-26!52;UBERON:0007135!9.01e-26!52;UBERON:0001017!1.65e-25!73;UBERON:0005743!1.65e-25!73;UBERON:0000073!3.12e-24!75;UBERON:0001016!3.12e-24!75;UBERON:0000955!4.45e-24!50;UBERON:0006238!4.45e-24!50;UBERON:0002616!2.23e-23!49;UBERON:0002020!8.65e-22!34;UBERON:0002346!1.05e-21!71;UBERON:0003075!1.05e-21!71;UBERON:0007284!1.05e-21!71;UBERON:0000033!1.60e-20!63;UBERON:0004121!7.85e-20!102;UBERON:0000924!7.85e-20!102;UBERON:0006601!7.85e-20!102;UBERON:0003080!1.33e-19!40;UBERON:0002780!9.58e-19!39;UBERON:0001890!9.58e-19!39;UBERON:0006240!9.58e-19!39;UBERON:0002791!8.65e-18!29;UBERON:0003528!8.65e-18!29;UBERON:0001893!8.65e-18!29;UBERON:0003056!9.25e-18!49;UBERON:0000153!6.08e-12!94;UBERON:0000956!1.44e-11!21;UBERON:0001869!1.44e-11!21;UBERON:0000203!1.44e-11!21;UBERON:0007811!5.90e-11!86;UBERON:0002619!8.81e-11!17;UBERON:0002021!1.28e-10!10;UBERON:0000411!1.28e-10!10;UBERON:0001950!1.28e-10!10;UBERON:0000025!5.30e-10!114;UBERON:0004111!4.62e-09!122;UBERON:0002420!1.27e-07!8;UBERON:0007245!1.27e-07!8;UBERON:0010009!1.27e-07!8;UBERON:0010011!1.27e-07!8;UBERON:0000454!1.27e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.42e-45,54;UBERON:0001049,1.68e-41,52;UBERON:0005068,1.68e-41,52;UBERON:0006241,1.68e-41,52;UBERON:0007135,1.68e-41,52;UBERON:0001017,4.49e-40,73;UBERON:0001016,8.53e-39,75;UBERON:0002020,1.19e-37,34;UBERON:0002346,2.54e-32,64;UBERON:0003075,2.54e-32,64;UBERON:0007284,2.54e-32,64;UBERON:0002616,4.30e-31,46;UBERON:0000955,2.72e-30,47;UBERON:0006238,2.72e-30,47;UBERON:0004121,5.84e-29,95;UBERON:0000924,5.84e-29,95;UBERON:0006601,5.84e-29,95;UBERON:0003080,1.71e-28,40;UBERON:0003528,1.77e-28,29;UBERON:0002791,1.77e-28,29;UBERON:0001893,1.77e-28,29;UBERON:0010371,2.04e-27,73;UBERON:0002780,1.11e-26,39;UBERON:0001890,1.11e-26,39;UBERON:0006240,1.11e-26,39;UBERON:0002021,8.95e-24,10;UBERON:0000411,8.95e-24,10;UBERON:0001950,8.95e-24,10;UBERON:0003056,3.69e-22,49;UBERON:0010314,3.32e-20,92;UBERON:0002420,1.97e-16,8;UBERON:0007245,1.97e-16,8;UBERON:0010009,1.97e-16,8;UBERON:0010011,1.97e-16,8;UBERON:0000454,1.97e-16,8;UBERON:0002619,8.83e-16,17;UBERON:0000025,7.46e-15,114;UBERON:0000956,8.02e-15,21;UBERON:0001869,8.02e-15,21;UBERON:0000203,8.02e-15,21;UBERON:0004111,2.19e-13,122;UBERON:0003076,5.60e-13,12;UBERON:0003057,5.60e-13,12;UBERON:0002240,2.79e-12,6;UBERON:0005174,2.79e-12,6;UBERON:0001137,2.79e-12,6;UBERON:0000369,1.02e-10,5;UBERON:0002435,1.02e-10,5;UBERON:0000204,1.02e-10,5;UBERON:0010082,1.02e-10,5;UBERON:0001948,1.07e-10,5;UBERON:0002315,1.07e-10,5;UBERON:0011216,5.02e-10,194;UBERON:0002950,2.34e-09,4;UBERON:0001891,2.34e-09,4;UBERON:0009616,2.34e-09,4;UBERON:0010286,2.34e-09,4;UBERON:0002038,2.65e-07,3;UBERON:0009663,2.65e-07,3;UBERON:0009661,2.65e-07,3;UBERON:0000125,2.65e-07,3;UBERON:0002308,2.65e-07,3;UBERON:0000483,3.81e-07,174;UBERON:0004684,5.06e-07,3;UBERON:0002275,5.06e-07,3;UBERON:0000119,5.57e-07,176;UBERON:0002257,7.85e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,1.21389876515759,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,3.14216082844184,1.76694832761291,0.244981598429908,0.766763768145891,0,1.10115880999389,2.042997409363,2.4577045320999,1.71452174049252,2.01272815925301,1.04182674111352,1.95428099300967,3.37657566019008,1.68078072554491,1.47314292736834,1.13897344639282,2.42319279572891,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0.585561594023094,1.8850203613211,0,0,0,0,2.84602214869163,5.03250663100489,1.7591609295801,5.56237824615285,5.37002460393694,1.45451631191692,2.43361894601636,0.203678727700633,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0,0,1.11218899690239,0.348252166522167,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.514523061896422,0,0,0.213288250535234,0,0.515469845288373,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0,0,0.144649058581512,0,0,0,0,1.60550589987792,2.57865710502847,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0.790575555893047,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0.220528398054962,0,0,0.241251699712623,0.119372344003136,0,0,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,3.22227665555024,4.58316410751517,3.95262319390481,4.11049511862385,2.2661816921691,4.72515750162264,9.00642406448441,8.60970577069989,7.24864436452548,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.735374033800057,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.347652977834566,0,0,0.441596760403192,0,0,0,0,0.470546902076653,0.0846146078916765,0.365855945745545,0,0.271608227691724,0,0.355905054372522,0.197008964751127,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0,0,0|short_description=p3@Dbc1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56710 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q920P3 | |||
|association_with_transcript=-17bp_to_ENSMUST00000030036,NM_019967,uc008thw.1,uc008thx.1_5end | |||
|cluster_id=chr4:68615448..68615457,- | |||
|description=CAGE_peak_3_at_Dbc1_5end | |||
|id=chr4:68615448..68615457,- | |||
|ontology_enrichment_celltype=CL:0000117!1.04e-13!23;CL:0000337!1.04e-13!23;CL:0000540!7.43e-10!33;CL:0000047!7.43e-10!33;CL:0000031!7.43e-10!33;CL:0000404!7.43e-10!33;CL:0000393!6.28e-08!39;CL:0000211!6.28e-08!39;CL:0000221!5.57e-07!44;CL:0000133!5.57e-07!44;CL:0002319!8.42e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.32e-23,23;CL:0000337,7.32e-23,23;CL:0000540,1.00e-14,33;CL:0000047,1.00e-14,33;CL:0000031,1.00e-14,33;CL:0000404,1.00e-14,33;CL:0000393,7.33e-12,39;CL:0000211,7.33e-12,39;CL:0002319,2.12e-10,43;CL:0000221,4.45e-10,44;CL:0000133,4.45e-10,44;CL:0002614,2.65e-07,3;CL:0002610,5.06e-07,3;CL:0002612,7.85e-07,3;CL:0002613,9.98e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.01e-26!52;UBERON:0005068!9.01e-26!52;UBERON:0006241!9.01e-26!52;UBERON:0007135!9.01e-26!52;UBERON:0001017!1.65e-25!73;UBERON:0005743!1.65e-25!73;UBERON:0000073!3.12e-24!75;UBERON:0001016!3.12e-24!75;UBERON:0000955!4.45e-24!50;UBERON:0006238!4.45e-24!50;UBERON:0002616!2.23e-23!49;UBERON:0002020!8.65e-22!34;UBERON:0002346!1.05e-21!71;UBERON:0003075!1.05e-21!71;UBERON:0007284!1.05e-21!71;UBERON:0000033!1.60e-20!63;UBERON:0004121!7.85e-20!102;UBERON:0000924!7.85e-20!102;UBERON:0006601!7.85e-20!102;UBERON:0003080!1.33e-19!40;UBERON:0002780!9.58e-19!39;UBERON:0001890!9.58e-19!39;UBERON:0006240!9.58e-19!39;UBERON:0002791!8.65e-18!29;UBERON:0003528!8.65e-18!29;UBERON:0001893!8.65e-18!29;UBERON:0003056!9.25e-18!49;UBERON:0000153!6.08e-12!94;UBERON:0000956!1.44e-11!21;UBERON:0001869!1.44e-11!21;UBERON:0000203!1.44e-11!21;UBERON:0007811!5.90e-11!86;UBERON:0002619!8.81e-11!17;UBERON:0002021!1.28e-10!10;UBERON:0000411!1.28e-10!10;UBERON:0001950!1.28e-10!10;UBERON:0000025!5.30e-10!114;UBERON:0004111!4.62e-09!122;UBERON:0002420!1.27e-07!8;UBERON:0007245!1.27e-07!8;UBERON:0010009!1.27e-07!8;UBERON:0010011!1.27e-07!8;UBERON:0000454!1.27e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.42e-45,54;UBERON:0001049,1.68e-41,52;UBERON:0005068,1.68e-41,52;UBERON:0006241,1.68e-41,52;UBERON:0007135,1.68e-41,52;UBERON:0001017,4.49e-40,73;UBERON:0001016,8.53e-39,75;UBERON:0002020,1.19e-37,34;UBERON:0002346,2.54e-32,64;UBERON:0003075,2.54e-32,64;UBERON:0007284,2.54e-32,64;UBERON:0002616,4.30e-31,46;UBERON:0000955,2.72e-30,47;UBERON:0006238,2.72e-30,47;UBERON:0004121,5.84e-29,95;UBERON:0000924,5.84e-29,95;UBERON:0006601,5.84e-29,95;UBERON:0003080,1.71e-28,40;UBERON:0003528,1.77e-28,29;UBERON:0002791,1.77e-28,29;UBERON:0001893,1.77e-28,29;UBERON:0010371,2.04e-27,73;UBERON:0002780,1.11e-26,39;UBERON:0001890,1.11e-26,39;UBERON:0006240,1.11e-26,39;UBERON:0002021,8.95e-24,10;UBERON:0000411,8.95e-24,10;UBERON:0001950,8.95e-24,10;UBERON:0003056,3.69e-22,49;UBERON:0010314,3.32e-20,92;UBERON:0002420,1.97e-16,8;UBERON:0007245,1.97e-16,8;UBERON:0010009,1.97e-16,8;UBERON:0010011,1.97e-16,8;UBERON:0000454,1.97e-16,8;UBERON:0002619,8.83e-16,17;UBERON:0000025,7.46e-15,114;UBERON:0000956,8.02e-15,21;UBERON:0001869,8.02e-15,21;UBERON:0000203,8.02e-15,21;UBERON:0004111,2.19e-13,122;UBERON:0003076,5.60e-13,12;UBERON:0003057,5.60e-13,12;UBERON:0002240,2.79e-12,6;UBERON:0005174,2.79e-12,6;UBERON:0001137,2.79e-12,6;UBERON:0000369,1.02e-10,5;UBERON:0002435,1.02e-10,5;UBERON:0000204,1.02e-10,5;UBERON:0010082,1.02e-10,5;UBERON:0001948,1.07e-10,5;UBERON:0002315,1.07e-10,5;UBERON:0011216,5.02e-10,194;UBERON:0002950,2.34e-09,4;UBERON:0001891,2.34e-09,4;UBERON:0009616,2.34e-09,4;UBERON:0010286,2.34e-09,4;UBERON:0002038,2.65e-07,3;UBERON:0009663,2.65e-07,3;UBERON:0009661,2.65e-07,3;UBERON:0000125,2.65e-07,3;UBERON:0002308,2.65e-07,3;UBERON:0000483,3.81e-07,174;UBERON:0004684,5.06e-07,3;UBERON:0002275,5.06e-07,3;UBERON:0000119,5.57e-07,176;UBERON:0002257,7.85e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,1.21389876515759,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,3.14216082844184,1.76694832761291,0.244981598429908,0.766763768145891,0,1.10115880999389,2.042997409363,2.4577045320999,1.71452174049252,2.01272815925301,1.04182674111352,1.95428099300967,3.37657566019008,1.68078072554491,1.47314292736834,1.13897344639282,2.42319279572891,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0.585561594023094,1.8850203613211,0,0,0,0,2.84602214869163,5.03250663100489,1.7591609295801,5.56237824615285,5.37002460393694,1.45451631191692,2.43361894601636,0.203678727700633,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0,0,1.11218899690239,0.348252166522167,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.514523061896422,0,0,0.213288250535234,0,0.515469845288373,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0,0,0.144649058581512,0,0,0,0,1.60550589987792,2.57865710502847,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0.790575555893047,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0.220528398054962,0,0,0.241251699712623,0.119372344003136,0,0,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,3.22227665555024,4.58316410751517,3.95262319390481,4.11049511862385,2.2661816921691,4.72515750162264,9.00642406448441,8.60970577069989,7.24864436452548,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.735374033800057,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.347652977834566,0,0,0.441596760403192,0,0,0,0,0.470546902076653,0.0846146078916765,0.365855945745545,0,0.271608227691724,0,0.355905054372522,0.197008964751127,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p3@Dbc1 | |||
}} |
Latest revision as of 04:58, 27 September 2015
Short description: | p3@Dbc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dbc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -17bp_to_ENSMUST00000030036, NM_019967, uc008thw.1, uc008thx.1_5end |
EntrezGene: | Dbc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.32e-23 | 23 |
neuroblast (sensu Vertebrata) | 7.32e-23 | 23 |
neuron | 1.00e-14 | 33 |
neuronal stem cell | 1.00e-14 | 33 |
neuroblast | 1.00e-14 | 33 |
electrically signaling cell | 1.00e-14 | 33 |
electrically responsive cell | 7.33e-12 | 39 |
electrically active cell | 7.33e-12 | 39 |
neural cell | 2.12e-10 | 43 |
ectodermal cell | 4.45e-10 | 44 |
neurectodermal cell | 4.45e-10 | 44 |
neuron of the substantia nigra | 2.65e-07 | 3 |
raphe nuclei neuron | 5.06e-07 | 3 |
neuron of the ventral spinal cord | 7.85e-07 | 3 |
striatum neuron | 9.98e-07 | 3 |