FFCP PHASE1:Mm9::chr4:5571363..5571387,+: Difference between revisions
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{{FFCP|EntrezGene=242297|HGNC=|MCL_coexpression_id=3479|UniProt=|association_with_transcript=0bp_to_ENSMUST00000126564_5end|description=CAGE_peak_3_at_Fam110b_5end|id=chr4:5571363..5571387,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!1.26e-11!49;UBERON:0000033!1.37e-11!63;UBERON:0001049!3.72e-10!52;UBERON:0005068!3.72e-10!52;UBERON:0006241!3.72e-10!52;UBERON:0007135!3.72e-10!52;UBERON:0000955!3.93e-10!50;UBERON:0006238!3.93e-10!50;UBERON:0002616!6.71e-10!49;UBERON:0003080!7.85e-10!40;UBERON:0002780!9.08e-10!39;UBERON:0001890!9.08e-10!39;UBERON:0006240!9.08e-10!39;UBERON:0002346!2.90e-09!71;UBERON:0003075!2.90e-09!71;UBERON:0007284!2.90e-09!71;UBERON:0000468!1.83e-08!333;UBERON:0002020!3.34e-07!34;UBERON:0001017!5.60e-07!73;UBERON:0005743!5.60e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0003056,4.96e-12,49;UBERON:0000073,4.06e-11,54;UBERON:0002346,1.04e-10,64;UBERON:0003075,1.04e-10,64;UBERON:0007284,1.04e-10,64;UBERON:0010371,1.77e-10,73;UBERON:0001049,2.74e-10,52;UBERON:0005068,2.74e-10,52;UBERON:0006241,2.74e-10,52;UBERON:0007135,2.74e-10,52;UBERON:0003080,3.64e-10,40;UBERON:0002780,4.23e-10,39;UBERON:0001890,4.23e-10,39;UBERON:0006240,4.23e-10,39;UBERON:0010314,1.42e-09,92;UBERON:0000955,1.81e-09,47;UBERON:0006238,1.81e-09,47;UBERON:0002616,3.13e-09,46;UBERON:0002020,1.97e-07,34;UBERON:0001017,5.20e-07,73;UBERON:0004121,9.17e-07,95;UBERON:0000924,9.17e-07,95;UBERON:0006601,9.17e-07,95|phase1_expression=5.60520964866779,0,0.909998478779072,0.30246421130683,0,0.671517087647559,0.233612640595526,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0,0.607425802169478,0,0,0,0,1.87095238332354,0,0,4.15980299262857,5.04700418347774,0,0.86152399231815,0.861884930743556,0.570070258369122,0,0.443461021310609,0,0,0,0.288851619751275,0.831173226792462,1.02084678131185,0,0,0,0,0,0,1.51076181570693,2.02753862439029,1.46837401729345,2.34717403304412,0.872100625521786,2.19686182734472,1.94429899074283,0.139986421625363,0,0,0.725362142011344,0,0.257259436035947,0.286533439938757,2.57836046138721,3.23706337375356,4.23192783417626,1.90149421051854,2.03306719241479,4.4464739805557,2.2497492932035,1.97773272513395,2.8419204597844,1.49800055259202,1.53687322128622,2.90330914463737,3.78016627328734,3.36519938162211,4.57041575046086,2.65042249141936,5.63457676388789,4.02550978276593,9.19218786610021,2.20231761998777,5.49055553766307,3.84016333140609,3.29715719325485,4.02545631850602,4.16730696445408,1.3959149950069,2.25105044012672,2.59757021220577,2.94628585473668,3.27454865837937,3.72798891650601,0.302904773332736,0.151143120213571,1.15945795480671,0,0.679971333707751,0,0,0.448026887097336,0.561777680527007,1.1930122580464,1.29893002301434,0.70667914902068,1.83096445709685,0,2.54805239706646,7.11066703153331,0.216491041011214,0.253359865475099,0.505524445014783,0.5709193985953,0.258937883647172,0.742210695324124,2.60227990149204,0.608930956624282,1.84492397804847,1.3565037649736,1.88141931417128,0.502666365318702,0,1.15679485535929,0,3.558870698843,1.10420759230197,0,0,2.34224637609238,1.46612694769419,0.766371165625774,0.11981512450592,0,0,2.84602214869163,6.8625090422794,4.90051973240171,3.65031072403781,3.58001640262463,5.81806524766768,6.00292673350703,5.39748628406676,1.49288364732112,1.51633655060205,1.05220927943237,3.3831315170303,4.82794419310293,4.32149111532838,2.86339153887859,2.9255694635071,4.61209393025459,3.74806898238915,3.3631438196072,1.07783996466421,1.51284864134255,1.58356011747554,3.94552318369635,4.17070873838397,6.268538997399,6.79081050146213,4.77682240364384,0,0,0,2.07125772535502,1.87620847984877,2.70093092191522,3.55117103377815,3.73852040320067,3.5481435964097,4.65067889500816,2.95100741539581,2.10177616260905,2.63295759861569,3.11918181750281,2.43206428637567,1.75439984910399,1.75640092232841,1.47627060636409,2.94405927989778,2.6755199218614,0,0.793351699990633,6.39864751605702,8.82499353069666,7.21657783403723,3.63030344322017,4.00280478920767,3.04361001780095,0,1.81168850196412,1.25667604400135,2.18852119245266,0.779856348476481,0,1.51296634912286,0.398282546508734,2.84501851429623,3.19895835307241,2.25415471346161,2.24016460629846,1.35766741017338,2.17421041659988,2.65593455921881,0.885660887877613,1.255989822731,1.48076596706161,0.296452627087149,0.333690211432188,1.37591296579242,0.449724224769707,0,0.241177159752417,0,0.287696137450811,0.486405680325106,0,0,0,1.87222603868736,0.757736633841335,0.358794827043824,0.964887042726734,0.923765950833023,4.73728529426212,2.11854469374634,2.37643120085263,1.64283173801951,1.17254380209271,1.6663054862021,1.75620283072019,1.57635144106191,1.7717175171902,1.91345722388985,0.491589944147214,1.20879487306127,1.15719246865209,1.50791283939272,1.63171705145613,1.47529281905711,1.10374698521893,1.9266070798535,3.04750385139728,0.655739781506702,1.26235463602186,0.631016438832513,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=242297 | |||
|HGNC= | |||
|MCL_coexpression_id=3479 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000126564_5end | |||
|cluster_id=chr4:5571363..5571387,+ | |||
|description=CAGE_peak_3_at_Fam110b_5end | |||
|id=chr4:5571363..5571387,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.26e-11!49;UBERON:0000033!1.37e-11!63;UBERON:0001049!3.72e-10!52;UBERON:0005068!3.72e-10!52;UBERON:0006241!3.72e-10!52;UBERON:0007135!3.72e-10!52;UBERON:0000955!3.93e-10!50;UBERON:0006238!3.93e-10!50;UBERON:0002616!6.71e-10!49;UBERON:0003080!7.85e-10!40;UBERON:0002780!9.08e-10!39;UBERON:0001890!9.08e-10!39;UBERON:0006240!9.08e-10!39;UBERON:0002346!2.90e-09!71;UBERON:0003075!2.90e-09!71;UBERON:0007284!2.90e-09!71;UBERON:0000468!1.83e-08!333;UBERON:0002020!3.34e-07!34;UBERON:0001017!5.60e-07!73;UBERON:0005743!5.60e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,4.96e-12,49;UBERON:0000073,4.06e-11,54;UBERON:0002346,1.04e-10,64;UBERON:0003075,1.04e-10,64;UBERON:0007284,1.04e-10,64;UBERON:0010371,1.77e-10,73;UBERON:0001049,2.74e-10,52;UBERON:0005068,2.74e-10,52;UBERON:0006241,2.74e-10,52;UBERON:0007135,2.74e-10,52;UBERON:0003080,3.64e-10,40;UBERON:0002780,4.23e-10,39;UBERON:0001890,4.23e-10,39;UBERON:0006240,4.23e-10,39;UBERON:0010314,1.42e-09,92;UBERON:0000955,1.81e-09,47;UBERON:0006238,1.81e-09,47;UBERON:0002616,3.13e-09,46;UBERON:0002020,1.97e-07,34;UBERON:0001017,5.20e-07,73;UBERON:0004121,9.17e-07,95;UBERON:0000924,9.17e-07,95;UBERON:0006601,9.17e-07,95 | |||
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| |||
|short_description=p3@Fam110b | |||
}} |
Latest revision as of 02:44, 27 September 2015
Short description: | p3@Fam110b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam110b_5end |
Coexpression cluster: | MCL_coexpression_mm9:3479 |
Association with transcript: | 0bp_to_ENSMUST00000126564_5end |
EntrezGene: | Fam110b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 4.96e-12 | 49 |
regional part of nervous system | 4.06e-11 | 54 |
neurectoderm | 1.04e-10 | 64 |
neural plate | 1.04e-10 | 64 |
presumptive neural plate | 1.04e-10 | 64 |
ecto-epithelium | 1.77e-10 | 73 |
neural tube | 2.74e-10 | 52 |
neural rod | 2.74e-10 | 52 |
future spinal cord | 2.74e-10 | 52 |
neural keel | 2.74e-10 | 52 |
anterior neural tube | 3.64e-10 | 40 |
regional part of forebrain | 4.23e-10 | 39 |
forebrain | 4.23e-10 | 39 |
future forebrain | 4.23e-10 | 39 |
structure with developmental contribution from neural crest | 1.42e-09 | 92 |
brain | 1.81e-09 | 47 |
future brain | 1.81e-09 | 47 |
regional part of brain | 3.13e-09 | 46 |
gray matter | 1.97e-07 | 34 |
central nervous system | 5.20e-07 | 73 |
ectoderm-derived structure | 9.17e-07 | 95 |
ectoderm | 9.17e-07 | 95 |
presumptive ectoderm | 9.17e-07 | 95 |