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FFCP PHASE1:Mm9::chr4:43505923..43505937,-: Difference between revisions

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{{FFCP|EntrezGene=19782|HGNC=|MCL_coexpression_id=255|UniProt=|association_with_transcript=0bp_to_ENSMUST00000157463,NR_001460,uc008spx.1_5end|description=CAGE_peak_1_at_Rmrp_5end|id=chr4:43505923..43505937,-|ontology_enrichment_celltype=CL:0000548!5.63e-28!115;CL:0000004!5.63e-28!115;CL:0000255!5.63e-28!115;CL:0002371!3.73e-27!118;CL:0000144!3.36e-26!121;CL:0000012!3.36e-26!121;CL:0000723!1.84e-21!91;CL:0000048!1.84e-21!91;CL:0000034!6.71e-21!97;CL:0000063!5.62e-15!66;CL:0002321!1.48e-14!70;CL:0000220!1.48e-14!70;CL:0000219!5.97e-14!54;CL:0002320!2.59e-12!46;CL:0000134!2.59e-12!46;CL:0002319!1.08e-10!43;CL:0000055!1.38e-10!50;CL:0000221!4.21e-10!44;CL:0000133!4.21e-10!44;CL:0000540!3.75e-08!33;CL:0000047!3.75e-08!33;CL:0000031!3.75e-08!33;CL:0000404!3.75e-08!33;CL:0000393!8.27e-08!39;CL:0000211!8.27e-08!39;CL:0000988!8.65e-08!32;CL:0002032!8.65e-08!32;CL:0000037!8.65e-08!32;CL:0000566!8.65e-08!32;CL:0000837!8.65e-08!32;CL:0002031!3.23e-07!25;CL:0000763!7.98e-07!16;CL:0000049!8.61e-07!19|ontology_enrichment_celltype_v019_2=CL:0000723,1.84e-21,91;CL:0000048,1.84e-21,91;CL:0000034,6.71e-21,97;CL:0002321,1.48e-14,70;CL:0000219,5.97e-14,54;CL:0002320,2.59e-12,46;CL:0000134,2.59e-12,46;CL:0002319,1.08e-10,43;CL:0000221,4.21e-10,44;CL:0000133,4.21e-10,44;CL:0000540,3.75e-08,33;CL:0000047,3.75e-08,33;CL:0000031,3.75e-08,33;CL:0000404,3.75e-08,33;CL:0000393,8.27e-08,39;CL:0000211,8.27e-08,39;CL:0000988,8.65e-08,32;CL:0002032,8.65e-08,32;CL:0000037,8.65e-08,32;CL:0000837,8.65e-08,32;CL:0002031,3.23e-07,25;CL:0000763,7.98e-07,16;CL:0000049,8.61e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.59e-12!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.59e-12,46|phase1_expression=7.52699581392532,36.2934423944936,35.0349414329943,41.1351327377289,49.087781534742,31.7291823913472,23.3612640595526,34.734174005784,45.3339685328367,68.1127771597001,24.3129514880217,24.4102806525729,38.3489635045901,45.1089276482027,76.9483549794181,36.040597595389,22.3859801001007,23.9751245672261,30.5765186940797,62.8096684661085,14.7975324862861,21.2482635569895,24.291580389921,8.47959840805055,19.4997888907094,70.6305315861475,29.7225777349762,16.8067561494993,33.8241686632346,24.4469225867133,32.5943850663298,485.798465196618,399.177047142386,649.774892163299,86.3666343056311,71.4808975041517,79.8302182985863,12.5559489221072,30.4720784364282,14.1351410872926,13.5293242247133,11.6117732442936,14.0798002379035,13.5968563413623,14.6996550268296,19.2724089769766,173.690878445265,72.8204022310691,67.4436580994828,49.1907644657937,114.08893362467,103.50184634278,13.9259563027921,33.3666585325218,17.4768775554081,29.070316272062,34.6705462325896,44.8634720281375,58.6717736492834,40.7323054039465,64.6508031576303,127.744388590063,136.951398601115,73.7917768170747,162.174083460984,123.623540000621,65.912024314049,88.7544285292791,49.9783931326862,78.4384501707123,86.8642090381208,24.8516356431309,31.1424642741775,59.0405652216078,36.9963518130392,93.7603162342221,24.2254938198655,10.5980490610706,16.1286859919056,52.2269699411568,24.0612502674337,67.197824801822,29.5933978941464,43.895483582471,23.3781319098519,33.2930301585245,20.6438937158699,42.6854730939938,11.2074766133112,8.61515785217355,13.0439019915755,35.2773789562368,32.638624017972,59.9070542717977,113.061096635894,47.4908500323176,12.7804422319894,19.2586264513205,45.7223368101049,37.8073344726064,12.6759077799012,52.6138557398703,22.9324715735981,7.11066703153331,49.1434663095456,40.0308587450656,56.1132133966409,13.245330047411,8.54495016035667,7.86743337043571,37.2993452547192,46.2787527034455,38.2821725445057,38.735718622024,12.6995803706561,11.1843266283411,10.8765785803125,6.36237170447611,10.6153266233985,15.8531512948461,13.2504911076236,19.8798853785441,13.0474232852686,6.73395833126558,14.8707161837553,15.0719662573069,21.8063526600775,68.9888140642419,16.1379188382792,6.44099749440738,15.5550204958333,16.5863744788981,6.60532416730651,4.34716277461562,7.2725815595846,7.46309810111685,30.5518091550949,12.9383249434497,13.8997517138521,6.52369753248069,30.7084245391981,69.2005334344753,21.7875177064473,26.5240479390859,13.6072998302656,17.039124797885,23.7065363136114,12.4177617954728,17.2454394346274,12.6701073712439,18.1229657888867,30.9065982722881,44.2095126268701,10.447564995665,19.5493029587546,51.5498751059897,35.1106593656617,23.6760074545538,32.3946389310976,16.9843133479112,18.7620847984877,28.6298677723014,13.2577051927718,23.4149435779411,19.4376562238097,19.3003174142839,18.5108646965737,10.9759421825139,15.3040660419537,14.7750717671186,6.16122952548504,8.77199924551994,8.12335426576887,7.38135303182045,12.4071069652835,13.6863134464448,9.91256348951394,15.3381328664856,27.3008960685099,45.2861510127855,13.1444810548535,14.3195302482573,13.1203045868473,17.690983228468,28.9462727542152,24.8695421633256,12.5667604400135,10.7436494902221,8.77338392036041,24.268124033664,15.9942156907274,13.14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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19782
|HGNC=
|MCL_coexpression_id=255
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000157463,NR_001460,uc008spx.1_5end
|cluster_id=chr4:43505923..43505937,-
|description=CAGE_peak_1_at_Rmrp_5end
|id=chr4:43505923..43505937,-
|ontology_enrichment_celltype=CL:0000548!5.63e-28!115;CL:0000004!5.63e-28!115;CL:0000255!5.63e-28!115;CL:0002371!3.73e-27!118;CL:0000144!3.36e-26!121;CL:0000012!3.36e-26!121;CL:0000723!1.84e-21!91;CL:0000048!1.84e-21!91;CL:0000034!6.71e-21!97;CL:0000063!5.62e-15!66;CL:0002321!1.48e-14!70;CL:0000220!1.48e-14!70;CL:0000219!5.97e-14!54;CL:0002320!2.59e-12!46;CL:0000134!2.59e-12!46;CL:0002319!1.08e-10!43;CL:0000055!1.38e-10!50;CL:0000221!4.21e-10!44;CL:0000133!4.21e-10!44;CL:0000540!3.75e-08!33;CL:0000047!3.75e-08!33;CL:0000031!3.75e-08!33;CL:0000404!3.75e-08!33;CL:0000393!8.27e-08!39;CL:0000211!8.27e-08!39;CL:0000988!8.65e-08!32;CL:0002032!8.65e-08!32;CL:0000037!8.65e-08!32;CL:0000566!8.65e-08!32;CL:0000837!8.65e-08!32;CL:0002031!3.23e-07!25;CL:0000763!7.98e-07!16;CL:0000049!8.61e-07!19
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|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!2.59e-12!46
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.59e-12,46
|phase1_expression=7.52699581392532,36.2934423944936,35.0349414329943,41.1351327377289,49.087781534742,31.7291823913472,23.3612640595526,34.734174005784,45.3339685328367,68.1127771597001,24.3129514880217,24.4102806525729,38.3489635045901,45.1089276482027,76.9483549794181,36.040597595389,22.3859801001007,23.9751245672261,30.5765186940797,62.8096684661085,14.7975324862861,21.2482635569895,24.291580389921,8.47959840805055,19.4997888907094,70.6305315861475,29.7225777349762,16.8067561494993,33.8241686632346,24.4469225867133,32.5943850663298,485.798465196618,399.177047142386,649.774892163299,86.3666343056311,71.4808975041517,79.8302182985863,12.5559489221072,30.4720784364282,14.1351410872926,13.5293242247133,11.6117732442936,14.0798002379035,13.5968563413623,14.6996550268296,19.2724089769766,173.690878445265,72.8204022310691,67.4436580994828,49.1907644657937,114.08893362467,103.50184634278,13.9259563027921,33.3666585325218,17.4768775554081,29.070316272062,34.6705462325896,44.8634720281375,58.6717736492834,40.7323054039465,64.6508031576303,127.744388590063,136.951398601115,73.7917768170747,162.174083460984,123.623540000621,65.912024314049,88.7544285292791,49.9783931326862,78.4384501707123,86.8642090381208,24.8516356431309,31.1424642741775,59.0405652216078,36.9963518130392,93.7603162342221,24.2254938198655,10.5980490610706,16.1286859919056,52.2269699411568,24.0612502674337,67.197824801822,29.5933978941464,43.895483582471,23.3781319098519,33.2930301585245,20.6438937158699,42.6854730939938,11.2074766133112,8.61515785217355,13.0439019915755,35.2773789562368,32.638624017972,59.9070542717977,113.061096635894,47.4908500323176,12.7804422319894,19.2586264513205,45.7223368101049,37.8073344726064,12.6759077799012,52.6138557398703,22.9324715735981,7.11066703153331,49.1434663095456,40.0308587450656,56.1132133966409,13.245330047411,8.54495016035667,7.86743337043571,37.2993452547192,46.2787527034455,38.2821725445057,38.735718622024,12.6995803706561,11.1843266283411,10.8765785803125,6.36237170447611,10.6153266233985,15.8531512948461,13.2504911076236,19.8798853785441,13.0474232852686,6.73395833126558,14.8707161837553,15.0719662573069,21.8063526600775,68.9888140642419,16.1379188382792,6.44099749440738,15.5550204958333,16.5863744788981,6.60532416730651,4.34716277461562,7.2725815595846,7.46309810111685,30.5518091550949,12.9383249434497,13.8997517138521,6.52369753248069,30.7084245391981,69.2005334344753,21.7875177064473,26.5240479390859,13.6072998302656,17.039124797885,23.7065363136114,12.4177617954728,17.2454394346274,12.6701073712439,18.1229657888867,30.9065982722881,44.2095126268701,10.447564995665,19.5493029587546,51.5498751059897,35.1106593656617,23.6760074545538,32.3946389310976,16.9843133479112,18.7620847984877,28.6298677723014,13.2577051927718,23.4149435779411,19.4376562238097,19.3003174142839,18.5108646965737,10.9759421825139,15.3040660419537,14.7750717671186,6.16122952548504,8.77199924551994,8.12335426576887,7.38135303182045,12.4071069652835,13.6863134464448,9.91256348951394,15.3381328664856,27.3008960685099,45.2861510127855,13.1444810548535,14.3195302482573,13.1203045868473,17.690983228468,28.9462727542152,24.8695421633256,12.5667604400135,10.7436494902221,8.77338392036041,24.268124033664,15.9942156907274,13.1433240347882,54.4346875735344,29.47611625331,13.5249282807697,25.4564159806643,24.2440608959532,15.850695295212,9.80166325425988,6.05201606716369,5.96595165797224,9.00799296629144,8.59712618552732,10.8449318715461,11.2038627214526,8.7696223830093,9.73728582664814,14.470629585145,25.462585178142,18.9879450717535,12.4844124616777,16.1991233780968,56.0696005456683,3.72140947668503,11.2333562321242,11.6186283855671,7.71408878144222,8.68398338454061,16.2582807346612,52.6786124721948,12.2223732331519,27.8381940671309,27.4587590497547,12.3954630506944,15.7108802984769,26.5381761086606,11.6650006638581,11.9590932410338,17.8589340896386,17.6972379892997,10.1884139300878,14.3202567995696,87.4589446847779,68.5321161611574,7.86822836830458,16.0043312856745,9.31193421929193,5.97779601620236,14.7541450839008,12.3710754330143,55.5294466172612,57.3944954116059,40.715022171499,54.2459171352293,47.4561175795499,57.464535750133,58.6975517428597,52.0215427082135,36.7617633490267,6.74774764485795,12.2068473279111,49.1461066121624,28.1794439681687,13.6925202067204,18.5843193675948,56.5678882241107,35.6741797218406,25.0844756075344,25.986566573508,15.9866276930842,11.8877014857382,15.2684166380552,16.0423820273125,10.1131762539461,23.1920938864997,22.6898195146011,7.83011093233712,37.6327686525438,60.4105053265463,50.1548661973926,22.699549906211,61.7156108903164,25.0114511315224,66.9822888052118,14.3149741918863,21.183207086382,9.04166432025344,12.8611277294354,10.8181165886257,6.75504759195346,10.9822556482886,7.05805868903763,13.1166376483433,4.82105785227325,19.6501512917531,33.434672610042,18.5194527369712,15.0694765603753,10.1153728513559,15.328137604837,16.8278645693917,15.1147568509551,14.3727972756601,0,21.6690155603078,16.4688768372747,24.9492337298361,24.6724189297073,27.076957904526,13.2167059457124,9.58780086413897,13.3495530411855,12.4430374360121,9.32008969630389,20.856638731315,31.8470243073675,57.57955467907,21.0007283411571,54.6346053310803,32.4395760942294,24.5276628769626,29.5563953595767,33.1355528385246,19.5683137869065,8.06484017522023,12.0084225838708,57.5739611424066,34.8190144788764,20.917252499425,17.1865627840782,12.1195626416572,14.9042357404761,14.0305050815848,16.8613971413407,11.27860738494,12.5024469569682,11.402572046551,13.7582933545671,15.7783817945118,6.12172035761071,26.6383144048878,25.3890214204816,27.5330770837089,11.9777548299958,13.8885031833875,14.8352815656485,16.7207335681671,5.517293144389,17.5073071211291,15.1907328047368,24.0616115644547,25.7779773515531,30.8287133896789,24.1726047164704,21.6007200074178,22.9663813644352,15.8599843144472,15.5328093525546,17.2286996989733,17.5570944296454,21.8539015365292,19.2054306483952,15.7209871970987,38.790980282953,23.7803998747728,12.1560683770948,9.62757628775446,14.4037410705365,15.7157165931949,11.1289541417785,15.2635657175908,12.2928292617349,10.4532553499216,13.8125170472091,13.9061191133827,15.046919196169,20.192209139362,15.7502844543805,28.8010172003749,20.0547660960051,20.7439485254169,15.4067201630268,14.8692821056222,14.9767855968267,14.0854539112035,17.0995312434598,17.9261430276538,16.2731258780744,13.9989321386525,17.7308068276014,21.6892452879935,10.6906420418317,13.8892759906422,28.2285953069879,15.2055545489515,16.1153290536224,15.6856432296452,13.4560765662904,13.9120701372253
|short_description=p1@Rmrp
}}

Latest revision as of 00:10, 27 September 2015

Short description:p1@Rmrp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rmrp_5end
Coexpression cluster:MCL_coexpression_mm9:255
Association with transcript: 0bp_to_ENSMUST00000157463, NR_001460, uc008spx.1_5end
EntrezGene:Rmrp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rmrp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I536.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I635.03
CD326+ enterocyte, pool1.CNhs13542.11848-124I341.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I449.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I731.73
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I823.36
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E934.73
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E745.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F268.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E624.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F124.41
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E438.35
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E845.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A176.95
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A336.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A522.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.98
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A430.58
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A662.81
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H221.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.29
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.50
GP2+ M cell, pool1.CNhs13228.11845-124H970.63
GP2+ M cell, pool2.CNhs13231.11846-124I129.72
GP2+ M cell, pool3.CNhs13240.11847-124I216.81
Ileum epithelium, pool1.CNhs13199.10252-104B933.82
Ileum epithelium, pool2.CNhs13232.10253-104C124.45
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C832.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3485.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6399.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9649.77
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F586.37
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F671.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F779.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H130.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G913.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H211.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.60
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.70
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B319.27
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7173.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C272.82
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B867.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C349.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C4114.09
Mouse Astrocytes, donor3.CNhs12107.11633-122C4103.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.93
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I933.37
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.48
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C129.07
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E134.67
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C544.86
Mouse Granule cells, donor1.CNhs12131.11713-123C358.67
Mouse Granule cells, donor2.CNhs12357.11731-123E340.73
Mouse Granule cells, donor3.CNhs12108.11636-122C764.65
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6127.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1136.95
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C773.79
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7162.17
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2123.62
Mouse Microglia, donor1.CNhs12629.11718-123C865.91
Mouse Microglia, donor2.CNhs12634.11736-123E888.75
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D549.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F578.44
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D986.86
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F124.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D531.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D259.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F237.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D693.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D452.23
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F424.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D867.20
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E429.59
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E543.90
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D633.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.64
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E142.69
Mouse Schwann, donor1.CNhs12507.11728-123D911.21
Mouse Schwann, donor2.CNhs12573.11746-123F98.62
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F735.28
Mouse hepatocyte, donor1.CNhs13078.11714-123C432.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C859.91
Mouse hepatocyte, donor6.CNhs13090.11822-124F4113.06
Mouse hepatocyte, donor8.CNhs13091.11824-124F647.49
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E345.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I837.81
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H152.61
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G149.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G240.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G356.11
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.25
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D77.87
adrenal gland, embryo E14.CNhs11038.406-44C537.30
adrenal gland, embryo E16.CNhs11004.1254-43D646.28
adrenal gland, embryo E17.CNhs11043.1263-45I138.28
adrenal gland, embryo E18.CNhs11026.1262-18F538.74
adrenal gland, neonate N00.CNhs11191.1311-23C112.70
adrenal gland, neonate N25.CNhs11223.1377-27I311.18
amnion, adult pregnant day17.5.CNhs10488.583-22A810.88
aorta, adult.CNhs10498.46-23H16.36
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F515.85
bone (os femoris), neonate N16.CNhs11225.1525-43A613.25
bone (os femoris), neonate N20.CNhs11195.1350-25C319.88
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I214.87
colon, adult.CNhs10468.36-18H715.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C721.81
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D168.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.14
corpora quadrigemina, adult.CNhs10501.16-22A46.44
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F116.59
cortex, adult.CNhs10473.12-14D56.61
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B27.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.94
epididymis, adult.CNhs10490.58-23B213.90
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C630.71
eyeball, embryo E14.CNhs10521.399-16E269.20
eyeball, embryo E15.CNhs10593.426-16C921.79
eyeball, embryo E17.CNhs11023.1261-18D426.52
eyeball, neonate N00.CNhs11207.633-15C613.61
eyeball, neonate N01.CNhs11140.1532-43E717.04
eyeball, neonate N02.CNhs11205.1551-44G823.71
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E217.25
forelimb, embryo E12.CNhs10600.359-14H212.67
forelimb, embryo E13.CNhs10589.384-1E218.12
forelimb, embryo E14.CNhs10577.413-26A830.91
forelimb, embryo E15.CNhs11007.437-20E744.21
forelimb, embryo E17.CNhs10598.1517-43C410.45
forelimb, embryo E18.CNhs11008.1520-43B519.55
gonad, embryo E13.CNhs11044.1564-45I651.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C835.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D223.68
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D532.39
heart, embryo E11.CNhs10586.331-24E916.98
heart, embryo E12.CNhs11015.353-12F518.76
heart, embryo E13.CNhs11013.376-3I928.63
heart, embryo E14.CNhs10597.403-26D413.26
heart, embryo E15.CNhs11017.431-16C823.41
heart, embryo E16.CNhs11021.457-17C619.44
heart, embryo E17.CNhs11025.479-18E519.30
heart, embryo E18.CNhs11030.1283-20G318.51
heart, neonate N00.CNhs11213.639-21E310.98
heart, neonate N03.CNhs11221.1349-25I215.30
heart, neonate N10.CNhs11118.749-24G114.78
heart, neonate N16.CNhs11209.782-15G16.16
heart, neonate N20.CNhs11127.821-26I68.77
heart, neonate N25.CNhs11196.1351-25D38.12
heart, neonate N30.CNhs11202.1390-42D27.38
hippocampus, adult.CNhs10478.13-16E812.41
hippocampus, neonate N00.CNhs11228.627-43G113.69
intestinal mucosa, adult.CNhs10506.860-29I39.91
intestine, adult.CNhs10496.178-9A315.34
intestine, embryo E12.CNhs11019.1251-16I527.30
intestine, embryo E13.CNhs11010.381-16D545.29
intestine, embryo E15.CNhs10602.976-16D813.14
intestine, embryo E16.CNhs10585.463-22H414.32
intestine, embryo E17.CNhs10582.482-18D313.12
intestine, embryo E18.CNhs10526.1289-20F717.69
intestine, neonate N00.CNhs11126.644-26D128.95
intestine, neonate N01.CNhs11192.1322-23E924.87
intestine, neonate N06.CNhs11102.688-20B812.57
intestine, neonate N07.CNhs11095.720-20F210.74
intestine, neonate N10.CNhs11098.755-23A58.77
intestine, neonate N20.CNhs11187.827-18D124.27
intestine, neonate N25.CNhs11121.1352-25E315.99
intestine, neonate N30.CNhs11131.1384-42G113.14
kidney, embryo E14.CNhs10606.411-4I954.43
kidney, embryo E15.CNhs10997.434-16F829.48
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I225.46
kidney, embryo E18.CNhs11001.1288-20C724.24
kidney, neonate N00.CNhs11214.646-21G715.85
kidney, neonate N10.CNhs11206.758-6D59.80
kidney, neonate N20.CNhs11113.832-19I16.05
kidney, neonate N25.CNhs11122.1353-25F35.97
kidney, neonate N30.CNhs11203.1385-42H19.01
liver, adult pregnant day01.CNhs10466.508-5B28.60
liver, embryo E12.CNhs10601.355-15F810.84
liver, embryo E13.CNhs10524.378-3H611.20
liver, embryo E14.CNhs10594.409-16E18.77
liver, embryo E15.CNhs10520.433-16D79.74
liver, embryo E16.CNhs10523.462-17F514.47
liver, embryo E17.CNhs10510.481-18A325.46
liver, embryo E18.CNhs10579.499-43G418.99
liver, neonate N00.CNhs11117.641-24F412.48
liver, neonate N03.CNhs11123.1345-25G216.20
liver, neonate N06.CNhs11101.684-20A856.07
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B911.23
liver, neonate N20.CNhs11220.823-25A311.62
liver, neonate N25.CNhs11198.1368-26H17.71
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B116.26
lung, embryo E12.CNhs10522.354-16G252.68
lung, embryo E14.CNhs10604.404-26F812.22
lung, embryo E15.CNhs11020.432-17C527.84
lung, embryo E16.CNhs10998.458-17B627.46
lung, embryo E17.CNhs10605.480-44A612.40
lung, embryo E18.CNhs10583.1287-20I615.71
lung, neonate N00.CNhs11224.640-42C626.54
lung, neonate N06.CNhs11212.683-20E511.67
lung, neonate N07.CNhs11111.715-19A311.96
lung, neonate N10.CNhs11219.750-23E617.86
lung, neonate N20.CNhs11109.822-18A417.70
lung, neonate N25.CNhs11119.1359-25C710.19
lung, neonate N30.CNhs11133.1394-42H214.32
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A187.46
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A168.53
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H216.00
medulla oblongata, adult.CNhs10477.17-12C29.31
medulla oblongata, neonate N30.CNhs11200.1396-42A35.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.37
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E155.53
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E257.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E340.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D754.25
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D847.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D957.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D458.70
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D552.02
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D636.76
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I712.21
ovary, embryo E18.CNhs11040.505-44H749.15
ovary, neonate N00.CNhs11217.1299-22I428.18
oviduct, adult pregnant day01.CNhs10500.988-6G613.69
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F456.57
pancreas, embryo E15.CNhs11042.1556-45F235.67
pancreas, embryo E16.CNhs11003.460-26E525.08
pancreas, embryo E17.CNhs10599.1558-45G325.99
pancreas, embryo E18.CNhs10580.1535-43I715.99
pancreas, neonate N00.CNhs11105.645-26G911.89
pancreas, neonate N01.CNhs11138.1531-43D715.27
pancreas, neonate N02.CNhs11139.1539-43D816.04
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H522.69
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E637.63
pituitary gland, embryo E13.CNhs11009.370-44C760.41
pituitary gland, embryo E14.CNhs11037.398-44A550.15
pituitary gland, embryo E15.CNhs10592.427-16B922.70
pituitary gland, embryo E16.CNhs11036.449-43F661.72
pituitary gland, embryo E17.CNhs11039.1265-44F525.01
pituitary gland, neonate N00.CNhs11190.1308-22E966.98
placenta, adult pregnant day10.CNhs10472.539-13I714.31
placenta, adult pregnant day17.CNhs10464.577-18G321.18
prostate, adult.CNhs10470.859-1F89.04
skin, adult.CNhs10492.30-1C312.86
skin, neonate N00.CNhs11124.650-25G410.82
skin, neonate N03.CNhs11215.662-22H36.76
skin, neonate N06.CNhs11097.693-20I510.98
skin, neonate N10.CNhs11108.762-6C47.06
small intestine, neonate N16.CNhs11114.790-21I113.12
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G219.65
spleen, embryo E16.CNhs11035.461-43C133.43
spleen, embryo E18.CNhs11011.1271-21F218.52
spleen, neonate N10.CNhs11116.752-24D115.07
spleen, neonate N20.CNhs11112.824-19H110.12
spleen, neonate N25.CNhs11099.1354-25G315.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C915.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.37
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E321.67
stomach, embryo E15.CNhs10603.1252-16G816.47
stomach, embryo E16.CNhs11022.459-17D424.95
stomach, embryo E17.CNhs11006.1035-18D524.67
stomach, embryo E18.CNhs10999.1286-20C627.08
stomach, neonate N03.CNhs11193.1340-24B813.22
stomach, neonate N07.CNhs11210.718-18A99.59
stomach, neonate N25.CNhs11104.1355-25E413.35
stomach, neonate N30.CNhs11134.1386-42I112.44
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G520.86
testis, embryo E13.CNhs11031.389-23F531.85
testis, embryo E15.CNhs11034.443-27C557.58
testis, embryo E16.CNhs11033.470-26G521.00
testis, embryo E17.CNhs11029.486-18I554.63
testis, embryo E18.CNhs11027.503-18G532.44
testis, neonate N00.CNhs11189.1300-22B724.53
testis, neonate N07.CNhs11222.726-26I429.56
testis, neonate N10.CNhs11204.763-44D933.14
testis, neonate N20.CNhs11110.839-18H319.57
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B512.01
thymus, embryo E14.CNhs11041.402-44I457.57
thymus, embryo E15.CNhs11005.430-45I234.82
thymus, embryo E16.CNhs11002.456-26C520.92
thymus, embryo E17.CNhs10581.478-18C117.19
thymus, embryo E18.CNhs10595.1273-19G412.12
thymus, neonate N02.CNhs11181.1541-43F814.90
thymus, neonate N03.CNhs11137.2104-43C714.03
thymus, neonate N06.CNhs11197.681-26C416.86
thymus, neonate N07.CNhs11211.713-19D311.28
thymus, neonate N10.CNhs11194.748-24E412.50
thymus, neonate N20.CNhs11186.820-7A211.40
thymus, neonate N25.CNhs11125.1362-25G713.76
thymus, neonate N30.CNhs11132.1393-42G215.78
tongue, adult.CNhs10499.32-1B46.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H326.64
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F725.39
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G527.53
urinary bladder, adult.CNhs10481.879-12E411.98
uterus, adult pregnant day19.CNhs10497.590-15F513.89
uterus, adult.CNhs10509.92-27E514.84
vagina, adult.CNhs10502.89-27D516.72
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A117.51
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A430.83
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I817.23
whole body, embryo E12.CNhs10587.857-27C917.56
whole body, embryo E13.CNhs10512.372-23H221.85
whole body, embryo E14.5.CNhs10578.420-27D219.21
whole body, embryo E14.CNhs10519.395-14B115.72
whole body, embryo E16.CNhs10514.453-14F238.79
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G523.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.75
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G528.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.74
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.87
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.09
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.73
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.69
whole body, embryo E17.5.CNhs10513.490-9F913.89
whole body, embryo E17.CNhs10517.475-3I528.23
whole body, embryo E18.CNhs10516.493-3B315.21
whole body, neonate N00.CNhs10525.657-19C216.12
whole body, neonate N01.CNhs10576.659-23C615.69
whole body, neonate N06.CNhs10515.692-21D113.46
whole body, neonate N10.CNhs10518.761-6B413.91





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
connective tissue2.59e-1246
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