FFCP PHASE1:Hg19::chr8:27529996..27530008,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:27529996..27530008,+ | |||
|description=CAGE_peak_at_chr8:27529996..27530008,+ | |||
|id=chr8:27529996..27530008,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.54e-10!75;CL:0000055!7.05e-10!180;CL:0002620!4.22e-07!23;CL:0002334!4.37e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002583;4.66e-20;2!CL:0000138;1.18e-14;6!CL:0000135;3.41e-14;3!CL:0000388;3.41e-14;3!CL:0002582;4.87e-14;3!CL:0002334;3.98e-13;12!CL:0000153;5.89e-10;9!CL:0000447;5.89e-10;9!CL:0000499;1.92e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002583,4.90e-20,2;CL:0000058,1.43e-14,6;CL:0000138,1.43e-14,6;CL:0000135,3.64e-14,3;CL:0000388,3.64e-14,3;CL:0002582,4.42e-14,3;CL:0002334,3.86e-13,12;CL:0000153,6.67e-10,9;CL:0000447,6.67e-10,9;CL:0000499,2.08e-08,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.06e-13;3!DOID:127;1.06e-13;3!DOID:0060072;1.65e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.24e-13,3;DOID:127,1.24e-13,3;DOID:0060072,1.86e-10,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.41e-14;3!UBERON:0000043;3.41e-14;3!UBERON:0007845;3.41e-14;3!UBERON:0002072;1.40e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.64e-14,3;UBERON:0000043,3.64e-14,3;UBERON:0007845,3.64e-14,3;UBERON:0002072,1.43e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.492484232307152,1.02000345622126,0,0.286235987131057,0.958120975510189,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0,1.01392563272577,0,1.45990461090791,0.283604451492204,0.443458794925128,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0,0,0.379891534993739,0,0,0.354668382198357,0,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0,0.352303495931295,0,0,0,0.368502951935304,0.206651562351531,0,0,0,0,0,0.500474079487857,0,0,0,0,0,0,0.213557388818567,0,0.900273288253207,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0.389748020644795,0.252433774244115,0.0920498986422993,0.80823028409406,0.355009592516614,0.201504196455281,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0,0.441175890929576,0.217879444092406,0,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.36669142910475,0,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0,0.542621605391443,0,0.65147236858747,0,0,0,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.36807447515742,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0.391602314925481,0,0,0,0,0,3.32870879020994,0.30239029332968,0.248107807818777,0.153461973288062,0.561320188866147,0.128139149255701,0,0,0,2.15893571323718,1.24293207719189,0.739144404124282,2.59627214591811,3.25389059687886,0,0,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.551346289938122,0.214840489736547,0.435050081742686,0.170453254832202,0,0,0,0,0,0.464845549297286,0,0,0,0,0.869932992075073,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0.633322905892992,0.329294892959902,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,0.593929361665277,0.307160702099232,0,0.281338832821026,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.307801034015188,0,0,0.0897576444097721,0.217294743844016,0.31900115973192,0.732780747214898,1.5991043280559,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0.0967563312890851,0.292357268344742,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0,0.837847203816763,0,0,0.399358000997982,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,2.28611152076586,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.500763722825999,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0,0,0.705797459094515,0,0,0.74627401443437,0,0.554805861502613,0,0.50313580350515,0,0,0.151230923763239,0.310874401165561,0.147855149989634,0.159296767163702,0,0,0.829412415681711,0,0,0.150257608997218,0,0,0.545545977607678,0,0,0,0,2.40376993627955,1.34699795506368,0,0.192619830407303,0.214441591374926,0.260994291965212,0.226705925512272,0,0,0.358177682162975,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,1.41696576325585,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0.846774100381858,0.22910686854405,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,5.20793025433452,0.924351257262837,3.02838593486652,0,0,0,0,0,0,0,0.151557396436479,0,0,0.413731983447581,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p@chr8:27529996..27530008,+ | |||
}} |
Latest revision as of 17:39, 31 July 2015
Short description: | p@chr8:27529996..27530008, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:27529996..27530008, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous preadipocyte | 4.90e-20 | 2 |
chondroblast | 1.43e-14 | 6 |
chondrocyte | 1.43e-14 | 6 |
fibrocyte | 3.64e-14 | 3 |
tendon cell | 3.64e-14 | 3 |
visceral preadipocyte | 4.42e-14 | 3 |
preadipocyte | 3.86e-13 | 12 |
GAG secreting cell | 6.67e-10 | 9 |
carbohydrate secreting cell | 6.67e-10 | 9 |
stromal cell | 2.08e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.64e-14 | 3 |
tendon | 3.64e-14 | 3 |
regular connective tissue | 3.64e-14 | 3 |
hypodermis | 1.43e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.24e-13 | 3 |
leiomyoma | 1.24e-13 | 3 |
benign neoplasm | 1.86e-10 | 4 |