FFCP PHASE1:Hg19::chr8:24151652..24151664,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=206 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=28bp_to_ENST00000437154_5end | |||
|cluster_id=chr8:24151652..24151664,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_5_at_ADAM28_5end | |||
|id=chr8:24151652..24151664,+ | |||
|ontology_enrichment_celltype=CL:0000236!1.04e-17!14;CL:0000945!1.12e-12!24;CL:0000826!1.12e-12!24;CL:0000738!1.12e-10!140;CL:0002087!2.19e-08!119;CL:0000037!3.06e-08!172;CL:0000566!3.06e-08!172;CL:0002032!4.42e-07!165;CL:0000837!4.42e-07!165;CL:0000988!4.60e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.46e-46;13!CL:0000945;4.61e-33;24!CL:0000542;2.72e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.88e-50,14;CL:0000945,4.52e-33,24;CL:0000826,4.52e-33,24;CL:0000838,1.04e-13,52;CL:0000542,2.13e-13,53;CL:0000051,2.13e-13,53;CL:0002087,4.61e-11,115;CL:0000738,4.66e-11,136;CL:0002031,1.77e-10,120;CL:0000037,4.65e-09,168;CL:0002032,1.22e-08,161;CL:0000837,1.22e-08,161;CL:0000988,2.33e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000051;2.72e-10;53!UBERON:0006241;2.61e-07;3!UBERON:0003057;2.61e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.76e-34!115;UBERON:0001049!2.17e-20!57;UBERON:0005068!2.17e-20!57;UBERON:0006241!2.17e-20!57;UBERON:0007135!2.17e-20!57;UBERON:0002616!3.03e-15!59;UBERON:0002780!4.82e-15!41;UBERON:0001890!4.82e-15!41;UBERON:0006240!4.82e-15!41;UBERON:0003080!1.68e-14!42;UBERON:0001017!6.87e-14!82;UBERON:0005743!1.83e-13!86;UBERON:0003075!3.41e-12!86;UBERON:0007284!3.41e-12!86;UBERON:0000955!3.69e-12!69;UBERON:0006238!3.69e-12!69;UBERON:0001893!1.41e-11!34;UBERON:0002020!2.69e-11!34;UBERON:0003528!2.69e-11!34;UBERON:0002346!3.63e-11!90;UBERON:0000073!3.99e-11!94;UBERON:0001016!3.99e-11!94;UBERON:0002791!8.01e-11!33;UBERON:0001869!5.70e-10!32;UBERON:0002619!1.16e-08!22;UBERON:0000153!1.86e-08!129;UBERON:0007811!1.86e-08!129;UBERON:0003056!2.22e-08!61;UBERON:0000033!1.11e-07!123;UBERON:0000956!3.19e-07!25;UBERON:0000203!3.19e-07!25;UBERON:0003076!3.40e-07!15;UBERON:0003057!3.40e-07!15;UBERON:0001950!6.29e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.99e-10;2!UBERON:0002240;2.61e-07;3!UBERON:0005174;2.61e-07;3!UBERON:0001137;2.61e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.04e-10,2;UBERON:0002240,2.83e-07,3;UBERON:0005174,2.83e-07,3;UBERON:0001137,2.83e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0.863077176966451,2.30544635876191,1.41889337933151,0.344745680736619,0.645484683583826,0,0,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,2.59302754908121,1.70489900213078,0.290209238628584,0,0,0.502497330513487,1.0429658368404,0.217188844705117,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,14.0796995569058,5.46138611262132,9.7846017924991,4.26730222566507,8.00791974072025,9.19603903927173,4.62731410949403,4.77026877267682,13.0918982895173,10.5702694086769,8.02773779062981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51183915378974,0.992425680696705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.862856803274467,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,1.52927441428475,0.569647187174163,0.714695326373367,0.822724546172388,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0.846458889008016,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0,0,0,0.269605053441981,0.179021174675609,0,0.295930216910801,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.361789315876224,1.52581736317083,0.221158519862449,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.353830258013357,0,0,0,0,0.539209063845416,0,0.702793337176017,0.364909578431332,0.19566461893209,0,0.394584402849391,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,8.03742673913339,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0.400794101257669,1.28071796843612,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,1.09524303113594,1.27746588066972,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,1.08270229666224,0,0.795229689809303,0.953423842781029,0,0.137539436597234,0,2.249738915515,0,0.303747783290123,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0.704815022316672,0,0.314408610199332,0.414239055347196,0.496166021811951,0,4.01915574656957,0,0,0,0,0,1.25643277000187,0,0,0.3755727921195,0,0.998361463831671,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.194860308839388,0.265729680626726,0.817826971279221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,1.41696576325585,0.957803154342908,0,0,0.138314504928436,0.645902582527404,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.739280431085226,0.405225507710368,0.781078098613847,0.620060389503552,0.126831620387814,0,0.548257766857182,0,0,0.766574565837572,0,0,1.21393120847326,1.13831095675649,0,1.38280785066935,0.171488009437418,0.883606528698812,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0.79062257427272,0,0,0,0,1.41095188908457,0,0.471353094203252,1.37415926980462,2.0793248022896,0.4226557275834,0,1.59772660565751,0.257831551894309,0,0.178553938605658,0,0,2.92134555298607,0.917458566809082,0.716697915757256,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.930896962757057,0.426467963801962,0,0.193766729508018,0.496597714366863,0,0,0,0,0,2.08791364345221,2.94061042109973,0.332660356546013,0.976839223331694,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | |||
|short_description=p5@ADAM28 | |||
}} |
Latest revision as of 15:08, 17 September 2015
Short description: | p5@ADAM28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ADAM28_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 28bp_to_ENST00000437154_5end |
EntrezGene: | ADAM28 |
HGNC: | 206 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.88e-50 | 14 |
lymphocyte of B lineage | 4.52e-33 | 24 |
pro-B cell | 4.52e-33 | 24 |
lymphoid lineage restricted progenitor cell | 1.04e-13 | 52 |
lymphocyte | 2.13e-13 | 53 |
common lymphoid progenitor | 2.13e-13 | 53 |
nongranular leukocyte | 4.61e-11 | 115 |
leukocyte | 4.66e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 1.77e-10 | 120 |
hematopoietic stem cell | 4.65e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.22e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.22e-08 | 161 |
hematopoietic cell | 2.33e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.04e-10 | 2 |
spinal cord | 2.83e-07 | 3 |
dorsal region element | 2.83e-07 | 3 |
dorsum | 2.83e-07 | 3 |