FFCP PHASE1:Hg19::chr8:22549856..22549885,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1960 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3240 | |||
|TSSclassifier=strong | |||
|UniProt=B4DH80,B4DHJ5,E7EW38,Q06889 | |||
|association_with_transcript=16bp_to_NM_001199880,uc011kzn.1_5end | |||
|cluster_id=chr8:22549856..22549885,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_EGR3_5end | |||
|id=chr8:22549856..22549885,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.91e-12;82!UBERON:0006222;9.93e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.00e-52!32;UBERON:0002780!2.06e-52!41;UBERON:0001890!2.06e-52!41;UBERON:0006240!2.06e-52!41;UBERON:0001893!2.13e-52!34;UBERON:0002619!1.83e-51!22;UBERON:0003080!5.72e-51!42;UBERON:0002791!4.73e-50!33;UBERON:0001950!8.96e-47!20;UBERON:0002020!4.60e-45!34;UBERON:0003528!4.60e-45!34;UBERON:0000956!9.98e-45!25;UBERON:0000203!9.98e-45!25;UBERON:0001049!8.35e-38!57;UBERON:0005068!8.35e-38!57;UBERON:0006241!8.35e-38!57;UBERON:0007135!8.35e-38!57;UBERON:0001017!1.04e-36!82;UBERON:0005743!2.17e-36!86;UBERON:0002616!3.21e-36!59;UBERON:0000955!4.63e-36!69;UBERON:0006238!4.63e-36!69;UBERON:0003056!1.47e-34!61;UBERON:0000073!6.33e-32!94;UBERON:0001016!6.33e-32!94;UBERON:0007023!3.90e-31!115;UBERON:0003075!1.99e-30!86;UBERON:0007284!1.99e-30!86;UBERON:0002346!2.15e-30!90;UBERON:0000033!3.02e-22!123;UBERON:0000153!5.36e-22!129;UBERON:0007811!5.36e-22!129;UBERON:0000924!2.54e-18!173;UBERON:0006601!2.54e-18!173;UBERON:0004121!5.70e-18!169;UBERON:0000200!7.42e-16!6;UBERON:0001871!1.01e-15!7;UBERON:0001872!7.37e-14!5;UBERON:0000349!2.21e-13!5;UBERON:0002021!2.57e-13!5;UBERON:0000025!7.28e-11!194;UBERON:0002420!4.99e-10!9;UBERON:0007245!4.99e-10!9;UBERON:0010009!4.99e-10!9;UBERON:0010011!4.99e-10!9;UBERON:0000454!4.99e-10!9;UBERON:0002771!8.97e-09!3;UBERON:0004111!1.47e-08!241;UBERON:0000369!7.18e-07!4;UBERON:0002435!7.18e-07!4;UBERON:0000204!7.18e-07!4;UBERON:0010082!7.18e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.78e-81;22!UBERON:0001869;9.26e-75;32!UBERON:0000956;2.55e-71;25!UBERON:0000203;2.55e-71;25!UBERON:0001893;7.58e-71;34!UBERON:0001950;2.31e-69;20!UBERON:0002791;2.26e-68;32!UBERON:0003528;2.28e-62;34!UBERON:0002020;2.28e-62;34!UBERON:0002780;1.80e-51;41!UBERON:0001890;1.80e-51;41!UBERON:0000073;3.73e-30;53!UBERON:0002616;3.73e-30;53!UBERON:0000200;8.01e-28;6!UBERON:0000955;4.24e-26;68!UBERON:0001017;1.62e-24;75!UBERON:0001872;1.76e-22;5!UBERON:0000349;1.99e-21;5!UBERON:0002021;3.22e-21;5!UBERON:0000369;6.99e-16;4!UBERON:0002435;6.99e-16;4!UBERON:0000204;6.99e-16;4!UBERON:0001871;9.10e-16;6!UBERON:0001016;2.61e-15;83!UBERON:0002771;2.06e-14;2!UBERON:0001954;4.32e-14;2!UBERON:0003022;4.32e-14;2!UBERON:0002421;4.32e-14;2!UBERON:0002600;4.32e-14;2!UBERON:0002420;3.04e-12;9!UBERON:0007245;3.04e-12;9!UBERON:0010009;3.04e-12;9!UBERON:0010011;3.04e-12;9!UBERON:0000454;3.04e-12;9!UBERON:0007023;1.09e-10;114!UBERON:0005383;4.48e-10;3!UBERON:0005382;4.48e-10;3!UBERON:0001870;6.00e-10;3!UBERON:0011216;1.59e-09;132!UBERON:0009663;2.70e-09;7!UBERON:0002022;1.65e-08;1!UBERON:0002902;1.90e-08;1!UBERON:0009899;1.90e-08;1!UBERON:0002581;2.61e-08;1!UBERON:0001882;4.71e-08;1!UBERON:0001874;4.71e-08;1!UBERON:0003112;4.71e-08;1!UBERON:0011158;4.71e-08;1!UBERON:0007190;4.71e-08;1!UBERON:0003128;4.71e-08;1!UBERON:0005403;4.71e-08;1!UBERON:0001703;4.71e-08;1!UBERON:0002241;4.71e-08;1!UBERON:0000125;2.50e-07;9!UBERON:0002308;2.50e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.15e-85,32;UBERON:0002619,8.35e-81,22;UBERON:0001893,1.52e-80,34;UBERON:0002791,1.57e-77,32;UBERON:0002780,5.67e-73,41;UBERON:0001890,5.67e-73,41;UBERON:0003080,5.67e-73,41;UBERON:0006240,5.67e-73,41;UBERON:0003528,6.95e-73,34;UBERON:0002020,6.95e-73,34;UBERON:0000956,4.16e-71,25;UBERON:0000203,4.16e-71,25;UBERON:0001950,2.69e-69,20;UBERON:0000073,7.55e-56,53;UBERON:0002616,7.55e-56,53;UBERON:0000955,2.20e-55,68;UBERON:0006238,2.20e-55,68;UBERON:0001049,1.08e-52,56;UBERON:0005068,1.08e-52,56;UBERON:0006241,1.08e-52,56;UBERON:0007135,1.08e-52,56;UBERON:0001017,5.23e-50,81;UBERON:0003056,4.13e-48,61;UBERON:0001016,1.14e-44,89;UBERON:0003075,6.96e-35,82;UBERON:0007284,6.96e-35,82;UBERON:0002346,4.36e-33,86;UBERON:0007023,2.39e-32,114;UBERON:0000200,1.25e-27,6;UBERON:0010371,1.08e-26,104;UBERON:0010314,1.49e-24,132;UBERON:0001872,1.67e-22,5;UBERON:0004121,2.00e-21,171;UBERON:0000924,2.00e-21,171;UBERON:0006601,2.00e-21,171;UBERON:0000349,2.34e-21,5;UBERON:0002021,2.90e-21,5;UBERON:0011216,2.27e-18,223;UBERON:0000369,4.78e-16,4;UBERON:0002435,4.78e-16,4;UBERON:0000204,4.78e-16,4;UBERON:0010082,4.78e-16,4;UBERON:0001871,1.10e-15,6;UBERON:0002771,2.89e-14,2;UBERON:0000025,5.55e-14,192;UBERON:0001954,7.36e-14,2;UBERON:0003022,7.36e-14,2;UBERON:0002421,7.36e-14,2;UBERON:0002600,7.36e-14,2;UBERON:0002420,2.37e-12,9;UBERON:0007245,2.37e-12,9;UBERON:0010009,2.37e-12,9;UBERON:0010011,2.37e-12,9;UBERON:0000454,2.37e-12,9;UBERON:0004111,2.62e-10,240;UBERON:0005383,3.82e-10,3;UBERON:0005382,3.82e-10,3;UBERON:0001870,6.28e-10,3;UBERON:0009663,2.18e-09,7;UBERON:0002022,1.65e-08,1;UBERON:0002902,1.77e-08,1;UBERON:0009899,1.77e-08,1;UBERON:0002581,3.11e-08,1;UBERON:0001882,3.58e-08,1;UBERON:0005403,3.58e-08,1;UBERON:0001874,3.83e-08,1;UBERON:0003112,4.11e-08,1;UBERON:0011158,4.11e-08,1;UBERON:0003128,4.11e-08,1;UBERON:0001703,4.11e-08,1;UBERON:0002241,4.11e-08,1;UBERON:0004761,4.11e-08,1;UBERON:0009617,4.11e-08,1;UBERON:0007190,5.05e-08,1;UBERON:0000125,2.13e-07,9;UBERON:0002308,2.13e-07,9;UBERON:0000483,3.94e-07,306;UBERON:0000119,5.10e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,0,0,0.144119953416961,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,3.51673541026282,0.111308705022906,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,5.19501349706367,1.99613798001194,0,0,0,0,0,0,0,0,0,0,4.70326110639091,0,0,0,3.29078095730959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,1.40558667435203,0,0,0,0,0,0.61214552326098,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,4.62168810477915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,3.18091875923721,1.22583065500418,0,0,0,0,0,6.31795389243457,0.335434687599266,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,3.29470915235301,2.754200475543,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31820246764154,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,3.85375350578757,1.41696576325585,1.43670473151436,1.8460472781668,0.756215088665154,5.8092092069943,3.55246420390072,0,0,0,0,0.231051332300676,0,0,0,0.150420656698515,0,0,0,0,0,3.44441681553813,4.68646859168308,4.75379631952723,4.75618576454301,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.271878931907327,4.40677582871089,0,0,0,3.61365856806804,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0993617643186,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p3@EGR3 | |||
}} |
Latest revision as of 12:25, 17 September 2015
Short description: | p3@EGR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EGR3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 16bp_to_NM_001199880, uc011kzn.1_5end |
EntrezGene: | EGR3 |
HGNC: | 3240 |
UniProt: | B4DH80B4DHJ5E7EW38Q06889 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data