FFCP PHASE1:Hg19::chr8:1949290..1949308,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9920 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29104 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-48bp_to_BC169331_5end | |||
|cluster_id=chr8:1949290..1949308,+ | |||
|description=CAGE_peak_8_at_KBTBD11_5end | |||
|id=chr8:1949290..1949308,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.56e-13!42;CL:0000860!7.73e-12!45;CL:0002194!1.27e-09!63;CL:0000576!1.27e-09!63;CL:0000040!1.27e-09!63;CL:0000559!1.27e-09!63;CL:0002009!4.79e-09!65;CL:0000557!2.23e-08!71;CL:0000839!9.06e-08!70;CL:0000766!3.97e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0002586;7.57e-18;3!CL:0000149;1.64e-13;4!CL:0002032;5.41e-07;1!CL:0000557;5.41e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,7.67e-18,3;CL:0000149,1.66e-13,4;CL:0000860,1.78e-08,42;CL:0002057,1.78e-08,42;CL:0000473,3.09e-07,48;CL:0000234,3.09e-07,48;CL:0000557,3.32e-07,67;CL:0002194,7.51e-07,59;CL:0000576,7.51e-07,59;CL:0000040,7.51e-07,59;CL:0000559,7.51e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;3.84e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.91e-17!115;UBERON:0005743!9.38e-12!86;UBERON:0001049!1.86e-10!57;UBERON:0005068!1.86e-10!57;UBERON:0006241!1.86e-10!57;UBERON:0007135!1.86e-10!57;UBERON:0000073!2.58e-10!94;UBERON:0001016!2.58e-10!94;UBERON:0002616!1.49e-09!59;UBERON:0001017!1.95e-09!82;UBERON:0003075!2.13e-09!86;UBERON:0007284!2.13e-09!86;UBERON:0002193!1.45e-08!112;UBERON:0002346!1.69e-08!90;UBERON:0000955!2.74e-08!69;UBERON:0006238!2.74e-08!69;UBERON:0001893!1.64e-07!34;UBERON:0002020!2.44e-07!34;UBERON:0003528!2.44e-07!34;UBERON:0000062!3.62e-07!511;UBERON:0002405!4.06e-07!115;UBERON:0002780!4.36e-07!41;UBERON:0001890!4.36e-07!41;UBERON:0006240!4.36e-07!41;UBERON:0002791!4.64e-07!33;UBERON:0000489!5.07e-07!32;UBERON:0002371!5.21e-07!80;UBERON:0002390!6.84e-07!102;UBERON:0003061!6.84e-07!102;UBERON:0003080!8.77e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;7.57e-18;3!UBERON:0001782;7.57e-18;3!UBERON:0005162;1.61e-11;2!UBERON:0000122;1.61e-11;2!UBERON:0000966;6.71e-11;5!UBERON:0005388;6.71e-11;5!UBERON:0001802;6.71e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001781,8.45e-23,4;UBERON:0001782,7.67e-18,3;UBERON:0005424,7.67e-18,3;UBERON:0000966,3.00e-15,6;UBERON:0005388,3.00e-15,6;UBERON:0001802,3.00e-15,6;UBERON:0005162,8.98e-12,2;UBERON:0000122,8.98e-12,2;UBERON:0002336,9.48e-07,1;UBERON:0011215,9.48e-07,1;UBERON:0001018,9.48e-07,1;UBERON:0002473,9.48e-07,1;UBERON:0005340,9.48e-07,1;UBERON:0003544,9.48e-07,1;UBERON:0005970,9.48e-07,1;UBERON:0002316,9.48e-07,1;UBERON:0001020,9.48e-07,1;UBERON:0002437,9.48e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0.247532705920093,1.65698687863958,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,1.00272223735071,0.651032612147555,0,0,0,0,0,0.242584061187816,0,0,0,1.1507695692886,0,1.18241114944293,1.03423704220986,0,1.35426486594342,0.188242339542605,0,0,0.918251677112708,0.641858054152187,1.27867425159808,1.31940520074686,0.997318288108159,0.852449501065388,0.290209238628584,0.56738522469114,0,0,1.5644487552606,0.65156653411535,0,0,0.316462387440884,0.211255286311942,0.637812899895131,1.04829322754188,0.44931452458598,0.300353785683013,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0,0,3.66093086322254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.207322110030741,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571652865261156,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.391602314925481,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0.784349769176855,0,0.422206515571503,1.13733384070897,0.170093705276516,0.647747748306418,0,0,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,9.4886546293064,5.576248976895,4.22991913063594,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,1.00899853595524,1.27753871307098,0.687010689511529,0.307240764308458,1.3420566473545,0.667396566847634,0.19538809540204,0,0,0.540911356951966,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0.562677665642051,0,8.73460533401826,0,0,0,0,0,0,0,0,0.179021174675609,1.02314474045374,0.0986434056369336,0,0,0,0.649376687132959,1.99613798001194,0,0,0,0.455173793141999,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0.530745387020035,0.611030144933625,0,0.370691816839509,0.104421949505455,1.55022605855557,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0.126621591911757,0,0.160317640503067,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,3.83239764200917,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0,0,0,1.22583065500418,0,0,0,0,0,0.242998226632099,0,1.02447419488958,1.57363764404994,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0.258565912723101,0.26446520348538,0,0,0.427149650270779,0.471612915298998,0.828478110694391,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0.500763722825999,0,1.33114861844223,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0.380805212168795,0,0,0.322231671127465,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0,0,0,0,3.07489822305536,0,0,0.414775308455192,0,0,0,0,0.245772908753719,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0.276629009856872,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0.147856086217045,0.202612753855184,0,0.206686796501184,0.570742291745161,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.203909198930495,0.131545547125698,0,0,0,0.314231179832004,0,0,1.72742072974897,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0.243835849964539,0,0.410651227424988,1.1598144313382,0,0,0,0,0,0,0.150962843566674,0.694567422971502,0.874238242015829,0,0,0,0.981542335574726,1.78227840196252,0.4226557275834,0,0.187967835959707,0.580120991762195,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,1.44806194206653,0,0.952257725854961,0.387533459016037,0.806971285846153,0,1.01835453245064,1.61693751166575,0,0.342233301085281,0.26940821205835,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p8@KBTBD11 | |||
}} |
Latest revision as of 07:27, 17 September 2015
Short description: | p8@KBTBD11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KBTBD11_5end |
Coexpression cluster: | NA |
Association with transcript: | -48bp_to_BC169331_5end |
EntrezGene: | KBTBD11 |
HGNC: | 29104 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 7.67e-18 | 3 |
visual pigment cell | 1.66e-13 | 4 |
classical monocyte | 1.78e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.78e-08 | 42 |
defensive cell | 3.09e-07 | 48 |
phagocyte | 3.09e-07 | 48 |
granulocyte monocyte progenitor cell | 3.32e-07 | 67 |
monopoietic cell | 7.51e-07 | 59 |
monocyte | 7.51e-07 | 59 |
monoblast | 7.51e-07 | 59 |
promonocyte | 7.51e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
layer of retina | 8.45e-23 | 4 |
pigmented layer of retina | 7.67e-18 | 3 |
presumptive retinal pigmented epithelium | 7.67e-18 | 3 |
retina | 3.00e-15 | 6 |
photoreceptor array | 3.00e-15 | 6 |
posterior segment of eyeball | 3.00e-15 | 6 |
multi cell component structure | 8.98e-12 | 2 |
neuron projection bundle | 8.98e-12 | 2 |
corpus callosum | 9.48e-07 | 1 |
central nervous system cell part cluster | 9.48e-07 | 1 |
axon tract | 9.48e-07 | 1 |
intercerebral commissure | 9.48e-07 | 1 |
dorsal telencephalic commissure | 9.48e-07 | 1 |
brain white matter | 9.48e-07 | 1 |
brain commissure | 9.48e-07 | 1 |
white matter | 9.48e-07 | 1 |
nervous system commissure | 9.48e-07 | 1 |
cerebral hemisphere white matter | 9.48e-07 | 1 |