FFCP PHASE1:Hg19::chr8:145064302..145064316,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2907 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4589 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z429 | |||
|association_with_transcript=34bp_to_ENST00000395068_5end | |||
|cluster_id=chr8:145064302..145064316,+ | |||
|description=CAGE_peak_3_at_GRINA_5end | |||
|id=chr8:145064302..145064316,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.78e-10!42;CL:0000860!1.75e-08!45;CL:0000222!9.01e-08!119;CL:0000192!2.32e-07!42;CL:0000514!2.32e-07!42;CL:0000220!6.85e-07!246;CL:0000183!7.47e-07!59;CL:0002194!8.04e-07!63;CL:0000576!8.04e-07!63;CL:0000040!8.04e-07!63;CL:0000559!8.04e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-12;33!CL:0002057;1.22e-12;33!CL:0000473;5.21e-11;39!CL:0000234;5.21e-11;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.21e-11,48;CL:0000234,3.21e-11,48;CL:0000860,1.78e-10,42;CL:0002057,1.78e-10,42;CL:0002194,3.54e-08,59;CL:0000576,3.54e-08,59;CL:0000040,3.54e-08,59;CL:0000559,3.54e-08,59;CL:0000222,4.43e-08,121;CL:0000192,8.77e-08,43;CL:0000514,8.77e-08,43;CL:0002009,9.41e-08,61;CL:0000766,5.14e-07,72;CL:0002321,5.79e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002057;5.76e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000923!3.35e-16!604;UBERON:0005291!3.35e-16!604;UBERON:0006598!3.35e-16!604;UBERON:0002532!3.35e-16!604;UBERON:0000467!3.70e-16!625;UBERON:0002050!5.99e-16!605;UBERON:0005423!5.99e-16!605;UBERON:0000480!7.03e-16!626;UBERON:0000922!1.94e-15!612;UBERON:0000468!7.94e-15!659;UBERON:0004111!1.58e-13!241;UBERON:0000025!2.38e-13!194;UBERON:0000477!1.25e-12!286;UBERON:0000483!1.40e-11!309;UBERON:0000119!2.19e-11!312;UBERON:0000475!4.03e-11!365;UBERON:0001049!1.61e-10!57;UBERON:0005068!1.61e-10!57;UBERON:0006241!1.61e-10!57;UBERON:0007135!1.61e-10!57;UBERON:0000955!3.88e-10!69;UBERON:0006238!3.88e-10!69;UBERON:0002616!3.97e-10!59;UBERON:0002204!1.09e-09!167;UBERON:0005743!1.34e-09!86;UBERON:0002619!1.38e-09!22;UBERON:0000033!2.12e-09!123;UBERON:0000062!2.86e-09!511;UBERON:0001017!4.04e-09!82;UBERON:0001950!4.31e-09!20;UBERON:0000481!7.50e-09!347;UBERON:0000073!9.65e-09!94;UBERON:0001016!9.65e-09!94;UBERON:0003075!2.60e-08!86;UBERON:0007284!2.60e-08!86;UBERON:0000153!1.68e-07!129;UBERON:0007811!1.68e-07!129;UBERON:0003080!1.84e-07!42;UBERON:0001869!2.04e-07!32;UBERON:0000956!2.21e-07!25;UBERON:0000203!2.21e-07!25;UBERON:0002780!2.57e-07!41;UBERON:0001890!2.57e-07!41;UBERON:0006240!2.57e-07!41;UBERON:0003056!2.61e-07!61;UBERON:0001893!5.01e-07!34;UBERON:0002020!6.14e-07!34;UBERON:0003528!6.14e-07!34;UBERON:0002346!9.30e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.48e-09;22!UBERON:0001950;4.76e-09;20!UBERON:0000956;2.73e-07;25!UBERON:0000203;2.73e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005423,5.67e-15,581;UBERON:0000922,8.89e-15,592;UBERON:0000923,1.84e-14,560;UBERON:0010316,1.84e-14,560;UBERON:0005291,1.84e-14,560;UBERON:0006598,1.84e-14,560;UBERON:0010317,1.84e-14,560;UBERON:0002532,1.84e-14,560;UBERON:0002050,2.04e-14,564;UBERON:0004111,4.22e-13,240;UBERON:0000025,7.57e-13,192;UBERON:0000483,2.46e-12,306;UBERON:0000119,3.93e-12,309;UBERON:0002204,1.65e-11,167;UBERON:0001049,2.27e-10,56;UBERON:0005068,2.27e-10,56;UBERON:0006241,2.27e-10,56;UBERON:0007135,2.27e-10,56;UBERON:0000955,5.46e-10,68;UBERON:0006238,5.46e-10,68;UBERON:0000073,1.03e-09,53;UBERON:0002616,1.03e-09,53;UBERON:0010371,1.31e-09,104;UBERON:0002619,1.37e-09,22;UBERON:0003075,3.73e-09,82;UBERON:0007284,3.73e-09,82;UBERON:0001950,4.30e-09,20;UBERON:0001017,5.64e-09,81;UBERON:0010314,9.28e-09,132;UBERON:0001016,4.05e-08,89;UBERON:0002346,1.89e-07,86;UBERON:0001869,2.04e-07,32;UBERON:0000956,2.21e-07,25;UBERON:0000203,2.21e-07,25;UBERON:0002780,2.57e-07,41;UBERON:0001890,2.57e-07,41;UBERON:0003080,2.57e-07,41;UBERON:0006240,2.57e-07,41;UBERON:0003056,2.75e-07,61;UBERON:0001893,5.00e-07,34;UBERON:0003528,6.13e-07,34;UBERON:0002020,6.13e-07,34;UBERON:0007503,6.16e-07,78 | |||
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| |||
|short_description=p3@GRINA | |||
}} |
Latest revision as of 00:12, 17 September 2015
Short description: | p3@GRINA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRINA_5end |
Coexpression cluster: | NA |
Association with transcript: | 34bp_to_ENST00000395068_5end |
EntrezGene: | GRINA |
HGNC: | 4589 |
UniProt: | Q7Z429 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.21e-11 | 48 |
phagocyte | 3.21e-11 | 48 |
classical monocyte | 1.78e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.78e-10 | 42 |
monopoietic cell | 3.54e-08 | 59 |
monocyte | 3.54e-08 | 59 |
monoblast | 3.54e-08 | 59 |
promonocyte | 3.54e-08 | 59 |
mesodermal cell | 4.43e-08 | 121 |
smooth muscle cell | 8.77e-08 | 43 |
smooth muscle myoblast | 8.77e-08 | 43 |
macrophage dendritic cell progenitor | 9.41e-08 | 61 |
myeloid leukocyte | 5.14e-07 | 72 |
embryonic cell | 5.79e-07 | 250 |