FFCP PHASE1:Mm9::chr4:122860699..122860844,+: Difference between revisions
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{{FFCP|EntrezGene=170638|HGNC=|MCL_coexpression_id=2|UniProt=F2Z450,B2RRY8,Q8BGZ1|association_with_transcript=0bp_to_ENSMUST00000126995,ENSMUST00000136619,NM_174998,uc008uox.1_5end|description=CAGE_peak_1_at_Hpcal4_5end|id=chr4:122860699..122860844,+|ontology_enrichment_celltype=CL:0000117!1.21e-12!23;CL:0000337!1.21e-12!23;CL:0000540!4.13e-09!33;CL:0000047!4.13e-09!33;CL:0000031!4.13e-09!33;CL:0000404!4.13e-09!33;CL:0002319!3.81e-07!43;CL:0000221!6.78e-07!44;CL:0000133!6.78e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,9.71e-16,23;CL:0000337,9.71e-16,23;CL:0000540,5.51e-09,33;CL:0000047,5.51e-09,33;CL:0000031,5.51e-09,33;CL:0000404,5.51e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.78e-21!73;UBERON:0005743!2.78e-21!73;UBERON:0000073!3.83e-21!75;UBERON:0001016!3.83e-21!75;UBERON:0001049!1.14e-20!52;UBERON:0005068!1.14e-20!52;UBERON:0006241!1.14e-20!52;UBERON:0007135!1.14e-20!52;UBERON:0000955!1.02e-19!50;UBERON:0006238!1.02e-19!50;UBERON:0002346!1.27e-19!71;UBERON:0003075!1.27e-19!71;UBERON:0007284!1.27e-19!71;UBERON:0002616!4.88e-19!49;UBERON:0002020!1.05e-18!34;UBERON:0004121!7.12e-18!102;UBERON:0000924!7.12e-18!102;UBERON:0006601!7.12e-18!102;UBERON:0003080!6.04e-17!40;UBERON:0000033!9.35e-17!63;UBERON:0002780!2.53e-16!39;UBERON:0001890!2.53e-16!39;UBERON:0006240!2.53e-16!39;UBERON:0003056!5.14e-16!49;UBERON:0002791!7.99e-16!29;UBERON:0003528!7.99e-16!29;UBERON:0001893!7.99e-16!29;UBERON:0000956!3.51e-11!21;UBERON:0001869!3.51e-11!21;UBERON:0000203!3.51e-11!21;UBERON:0002619!1.87e-09!17;UBERON:0002021!2.21e-08!10;UBERON:0000411!2.21e-08!10;UBERON:0001950!2.21e-08!10;UBERON:0007811!8.09e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.90e-26,54;UBERON:0001049,2.48e-24,52;UBERON:0005068,2.48e-24,52;UBERON:0006241,2.48e-24,52;UBERON:0007135,2.48e-24,52;UBERON:0001017,1.88e-22,73;UBERON:0002020,2.73e-22,34;UBERON:0001016,3.01e-21,75;UBERON:0000955,9.99e-21,47;UBERON:0006238,9.99e-21,47;UBERON:0002346,1.00e-20,64;UBERON:0003075,1.00e-20,64;UBERON:0007284,1.00e-20,64;UBERON:0002616,6.78e-20,46;UBERON:0003080,8.13e-19,40;UBERON:0003528,1.27e-18,29;UBERON:0002791,1.27e-18,29;UBERON:0001893,1.27e-18,29;UBERON:0002780,4.80e-18,39;UBERON:0001890,4.80e-18,39;UBERON:0006240,4.80e-18,39;UBERON:0003056,3.33e-17,49;UBERON:0010371,1.24e-16,73;UBERON:0004121,1.84e-16,95;UBERON:0000924,1.84e-16,95;UBERON:0006601,1.84e-16,95;UBERON:0000956,9.73e-13,21;UBERON:0001869,9.73e-13,21;UBERON:0000203,9.73e-13,21;UBERON:0010314,4.18e-12,92;UBERON:0002619,1.57e-10,17;UBERON:0002021,2.73e-10,10;UBERON:0000411,2.73e-10,10;UBERON:0001950,2.73e-10,10;UBERON:0002420,3.73e-07,8;UBERON:0007245,3.73e-07,8;UBERON:0010009,3.73e-07,8;UBERON:0010011,3.73e-07,8;UBERON:0000454,3.73e-07,8|phase1_expression=0.480446541314382,0,0.454999239389536,0.30246421130683,0,0.16787927191189,0,0.129123323441576,0.140788722151667,0.234064526321993,0.856089841127525,0.558405112967355,0,0,0,0,0,0.315462165358238,0.137114433605739,0,38.0143506975282,0,0,0,0,0,0,0,0,0.252030129759931,0,0.635030673459631,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0.699932108126813,0,0,0,0,0,0,0,10.3181395038395,21.1596391708813,12.0427966666174,0,0,0,0,0,1.19840044207362,2.30530983192933,2.48855069540346,5.26523159493594,4.6271491497304,33.1355141908412,38.4311261255808,4.04219637409348,2.49198224647415,4.5960939330501,50.6533052597188,82.1029583887757,63.2858917015723,20.8380334613706,21.3166209593614,14.5855743755893,39.0856198601933,100.171744585639,119.488229761466,24.1595440088408,23.7760706934502,13.047961207771,0.984440513331393,0.377857800533928,0.289864488701678,0.860423876981386,0,0.539703191637817,0,0,7.3031098468511,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,6.39429726426736,0,3.26572705942614,0.346970653532272,1.82679286987285,1.38369298353635,1.65794904607885,2.4693628498498,1.75933227861546,0.247194967734374,0.86759614151947,0,0.161766849947409,0,0,1.86391761218122,7.31951992528868,12.1479089951804,0.255457055208591,0,0,0,60.0660464013339,160.582711589338,22.1151659718641,322.270289636481,371.810274958301,78.7516688880733,176.031770428517,0.101839363850316,0.124406970610093,0.758168275301024,5.05060454127538,0.130120442962704,0,0.360124259610698,0.452114453507145,1.15662048557257,1.0249097622788,1.40552586839593,15.2634988736019,0,0,0.175951124163949,0,0.556094498451196,0.348252166522167,0,0,0,0,0,0.207125772535502,0.938104239924385,0.540186184383045,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0,0,0.134206418760372,264.755045242236,14.097931895962,0,0.793351699990633,4.05247676016945,1.16118335930219,2.06187938115349,1.21010114774006,1.55664630691409,1.90225626112559,1.89811624617805,1.97638745668813,2.5133520880027,2.38747766449381,1.55971269695296,0,0.648414149624083,1.39398891278057,0,0.456994050438915,1.1270773567308,0.8146053113812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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170638 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=F2Z450,B2RRY8,Q8BGZ1 | |||
|association_with_transcript=0bp_to_ENSMUST00000126995,ENSMUST00000136619,NM_174998,uc008uox.1_5end | |||
|cluster_id=chr4:122860699..122860844,+ | |||
|description=CAGE_peak_1_at_Hpcal4_5end | |||
|id=chr4:122860699..122860844,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.21e-12!23;CL:0000337!1.21e-12!23;CL:0000540!4.13e-09!33;CL:0000047!4.13e-09!33;CL:0000031!4.13e-09!33;CL:0000404!4.13e-09!33;CL:0002319!3.81e-07!43;CL:0000221!6.78e-07!44;CL:0000133!6.78e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.71e-16,23;CL:0000337,9.71e-16,23;CL:0000540,5.51e-09,33;CL:0000047,5.51e-09,33;CL:0000031,5.51e-09,33;CL:0000404,5.51e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.78e-21!73;UBERON:0005743!2.78e-21!73;UBERON:0000073!3.83e-21!75;UBERON:0001016!3.83e-21!75;UBERON:0001049!1.14e-20!52;UBERON:0005068!1.14e-20!52;UBERON:0006241!1.14e-20!52;UBERON:0007135!1.14e-20!52;UBERON:0000955!1.02e-19!50;UBERON:0006238!1.02e-19!50;UBERON:0002346!1.27e-19!71;UBERON:0003075!1.27e-19!71;UBERON:0007284!1.27e-19!71;UBERON:0002616!4.88e-19!49;UBERON:0002020!1.05e-18!34;UBERON:0004121!7.12e-18!102;UBERON:0000924!7.12e-18!102;UBERON:0006601!7.12e-18!102;UBERON:0003080!6.04e-17!40;UBERON:0000033!9.35e-17!63;UBERON:0002780!2.53e-16!39;UBERON:0001890!2.53e-16!39;UBERON:0006240!2.53e-16!39;UBERON:0003056!5.14e-16!49;UBERON:0002791!7.99e-16!29;UBERON:0003528!7.99e-16!29;UBERON:0001893!7.99e-16!29;UBERON:0000956!3.51e-11!21;UBERON:0001869!3.51e-11!21;UBERON:0000203!3.51e-11!21;UBERON:0002619!1.87e-09!17;UBERON:0002021!2.21e-08!10;UBERON:0000411!2.21e-08!10;UBERON:0001950!2.21e-08!10;UBERON:0007811!8.09e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.90e-26,54;UBERON:0001049,2.48e-24,52;UBERON:0005068,2.48e-24,52;UBERON:0006241,2.48e-24,52;UBERON:0007135,2.48e-24,52;UBERON:0001017,1.88e-22,73;UBERON:0002020,2.73e-22,34;UBERON:0001016,3.01e-21,75;UBERON:0000955,9.99e-21,47;UBERON:0006238,9.99e-21,47;UBERON:0002346,1.00e-20,64;UBERON:0003075,1.00e-20,64;UBERON:0007284,1.00e-20,64;UBERON:0002616,6.78e-20,46;UBERON:0003080,8.13e-19,40;UBERON:0003528,1.27e-18,29;UBERON:0002791,1.27e-18,29;UBERON:0001893,1.27e-18,29;UBERON:0002780,4.80e-18,39;UBERON:0001890,4.80e-18,39;UBERON:0006240,4.80e-18,39;UBERON:0003056,3.33e-17,49;UBERON:0010371,1.24e-16,73;UBERON:0004121,1.84e-16,95;UBERON:0000924,1.84e-16,95;UBERON:0006601,1.84e-16,95;UBERON:0000956,9.73e-13,21;UBERON:0001869,9.73e-13,21;UBERON:0000203,9.73e-13,21;UBERON:0010314,4.18e-12,92;UBERON:0002619,1.57e-10,17;UBERON:0002021,2.73e-10,10;UBERON:0000411,2.73e-10,10;UBERON:0001950,2.73e-10,10;UBERON:0002420,3.73e-07,8;UBERON:0007245,3.73e-07,8;UBERON:0010009,3.73e-07,8;UBERON:0010011,3.73e-07,8;UBERON:0000454,3.73e-07,8 | |||
|phase1_expression=0.480446541314382,0,0.454999239389536,0.30246421130683,0,0.16787927191189,0,0.129123323441576,0.140788722151667,0.234064526321993,0.856089841127525,0.558405112967355,0,0,0,0,0,0.315462165358238,0.137114433605739,0,38.0143506975282,0,0,0,0,0,0,0,0,0.252030129759931,0,0.635030673459631,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0.699932108126813,0,0,0,0,0,0,0,10.3181395038395,21.1596391708813,12.0427966666174,0,0,0,0,0,1.19840044207362,2.30530983192933,2.48855069540346,5.26523159493594,4.6271491497304,33.1355141908412,38.4311261255808,4.04219637409348,2.49198224647415,4.5960939330501,50.6533052597188,82.1029583887757,63.2858917015723,20.8380334613706,21.3166209593614,14.5855743755893,39.0856198601933,100.171744585639,119.488229761466,24.1595440088408,23.7760706934502,13.047961207771,0.984440513331393,0.377857800533928,0.289864488701678,0.860423876981386,0,0.539703191637817,0,0,7.3031098468511,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,6.39429726426736,0,3.26572705942614,0.346970653532272,1.82679286987285,1.38369298353635,1.65794904607885,2.4693628498498,1.75933227861546,0.247194967734374,0.86759614151947,0,0.161766849947409,0,0,1.86391761218122,7.31951992528868,12.1479089951804,0.255457055208591,0,0,0,60.0660464013339,160.582711589338,22.1151659718641,322.270289636481,371.810274958301,78.7516688880733,176.031770428517,0.101839363850316,0.124406970610093,0.758168275301024,5.05060454127538,0.130120442962704,0,0.360124259610698,0.452114453507145,1.15662048557257,1.0249097622788,1.40552586839593,15.2634988736019,0,0,0.175951124163949,0,0.556094498451196,0.348252166522167,0,0,0,0,0,0.207125772535502,0.938104239924385,0.540186184383045,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0,0,0.134206418760372,264.755045242236,14.097931895962,0,0.793351699990633,4.05247676016945,1.16118335930219,2.06187938115349,1.21010114774006,1.55664630691409,1.90225626112559,1.89811624617805,1.97638745668813,2.5133520880027,2.38747766449381,1.55971269695296,0,0.648414149624083,1.39398891278057,0,0.456994050438915,1.1270773567308,0.814605311381257,1.16371492300575,0.841629838683823,1.64414996523069,1.03327103585722,0.156998727841375,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03228509183265,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,1.63863314715738,2.59027472798843,1.44649058581512,0,0,0.491764273019036,2.75936746304733,24.4036896781444,24.1456074379939,0,0,0.315508219416257,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0.809621403349789,2.33804686329049,0.790575555893047,176.08408139915,0.283880170416537,0.178065603667255,0.325773918707152,0.494910368917606,0,0.242780636154981,0.906970670894253,0.565815239267694,0.590603785761546,0.614870295887855,0.775284879504663,0.363533729477506,0,0.632073515871632,0,0,6.12791290356818,0,0.388076051348264,0.428674070063185,0.709360934569094,1.60531935841864,2.30368628842969,11.8741330154694,0,2.1183207086382,2.42581237860458,0,0,0.120625849856312,0,0,2.62332752966866,27.6283699995659,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0.632671987162271,1.21991680276109,0.86404272657441,0.836353184057875,1.74690050996942,1.75323650300267,1.65306911450672,1.57053565190418,0.648074866458964,0,0,0,0,0.972255941720238,0.645799117388655,0.337912250981556,0.469428954583016,0,0,0.241584120826006,0.864090018773596,0,0.608175645870493,0.102710957164827,0,0.179026695667481,0,0,0,0,0.15241361331,0,0.0974578807397524,0.0962118416403295,0,0,3.10780334723691,4.48569283047379,1.00730769818447,1.54551675225752,1.87682475451182,0.183151624267265,0,0,252.444073649829,249.035952950383,243.480593211744,262.591662621155,374.055055794771,376.941554797461,385.437847632361,295.861030518313,376.10819945689,315.316029856858,0.31136204275253,0.798049746802062,0.682934423016537,2.67417388775123,1.25767897576789,2.5738091183002,3.11145418922261,2.26638562962784,4.49286893428541,4.80124702351215,3.8021894983536,3.58390048633545,2.71560371662659,2.43295579138503,2.41228969613576,3.81034953026459,4.63537303779422,4.62982129112892,2.88460130562315,1.91358596174717,1.02860775715625,2.30718548007139,3.33810665926249,3.48831399917588,2.35273451038327,2.70766745253365,2.19513567447327,2.63069711437843,3.80251518768413,3.36685362994643,2.25406534435931,2.36410757701352,2.45538625901814,3.25367366490529,2.70069255373598,6.24526444844865,4.67863216890817,2.57845264857958,1.14772999241306,1.54413993383661,1.39120701372253 | |||
|short_description=p1@Hpcal4 | |||
}} |
Latest revision as of 07:22, 26 September 2015
Short description: | p1@Hpcal4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hpcal4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000126995, ENSMUST00000136619, NM_174998, uc008uox.1_5end |
EntrezGene: | Hpcal4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.71e-16 | 23 |
neuroblast (sensu Vertebrata) | 9.71e-16 | 23 |
neuron | 5.51e-09 | 33 |
neuronal stem cell | 5.51e-09 | 33 |
neuroblast | 5.51e-09 | 33 |
electrically signaling cell | 5.51e-09 | 33 |