FFCP PHASE1:Mm9::chr4:120527452..120527472,+: Difference between revisions
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{{FFCP|EntrezGene=242662|HGNC=|MCL_coexpression_id=189|UniProt=Q80U57|association_with_transcript=28bp_to_ENSMUST00000071093_5end|description=CAGE_peak_2_at_Rims3_5end|id=chr4:120527452..120527472,+|ontology_enrichment_celltype=CL:0000540!3.98e-14!33;CL:0000047!3.98e-14!33;CL:0000031!3.98e-14!33;CL:0000404!3.98e-14!33;CL:0000393!1.90e-09!39;CL:0000211!1.90e-09!39;CL:0000221!2.39e-09!44;CL:0000133!2.39e-09!44;CL:0000117!3.94e-09!23;CL:0000337!3.94e-09!23;CL:0002319!5.28e-09!43|ontology_enrichment_celltype_v019_2=CL:0000540,1.47e-19,33;CL:0000047,1.47e-19,33;CL:0000031,1.47e-19,33;CL:0000404,1.47e-19,33;CL:0000393,5.27e-15,39;CL:0000211,5.27e-15,39;CL:0000221,3.29e-14,44;CL:0000133,3.29e-14,44;CL:0002319,1.13e-13,43;CL:0000117,5.29e-12,23;CL:0000337,5.29e-12,23;CL:0000107,3.42e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.30e-25!75;UBERON:0001016!2.30e-25!75;UBERON:0001017!3.46e-25!73;UBERON:0005743!3.46e-25!73;UBERON:0004121!1.10e-23!102;UBERON:0000924!1.10e-23!102;UBERON:0006601!1.10e-23!102;UBERON:0002346!1.40e-23!71;UBERON:0003075!1.40e-23!71;UBERON:0007284!1.40e-23!71;UBERON:0000033!5.99e-18!63;UBERON:0001049!2.37e-17!52;UBERON:0005068!2.37e-17!52;UBERON:0006241!2.37e-17!52;UBERON:0007135!2.37e-17!52;UBERON:0000955!1.15e-16!50;UBERON:0006238!1.15e-16!50;UBERON:0002616!5.55e-16!49;UBERON:0003056!1.17e-14!49;UBERON:0003080!7.07e-13!40;UBERON:0002780!3.29e-12!39;UBERON:0001890!3.29e-12!39;UBERON:0006240!3.29e-12!39;UBERON:0002020!9.65e-12!34;UBERON:0007811!1.35e-10!86;UBERON:0002791!4.37e-09!29;UBERON:0003528!4.37e-09!29;UBERON:0001893!4.37e-09!29;UBERON:0000153!6.43e-08!94;UBERON:0002021!4.61e-07!10;UBERON:0000411!4.61e-07!10;UBERON:0001950!4.61e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.97e-37,73;UBERON:0001016,3.28e-37,75;UBERON:0004121,9.30e-32,95;UBERON:0000924,9.30e-32,95;UBERON:0006601,9.30e-32,95;UBERON:0002346,4.74e-27,64;UBERON:0003075,4.74e-27,64;UBERON:0007284,4.74e-27,64;UBERON:0000073,4.88e-27,54;UBERON:0001049,1.09e-24,52;UBERON:0005068,1.09e-24,52;UBERON:0006241,1.09e-24,52;UBERON:0007135,1.09e-24,52;UBERON:0010371,4.79e-24,73;UBERON:0010314,3.76e-21,92;UBERON:0000955,2.02e-20,47;UBERON:0006238,2.02e-20,47;UBERON:0002616,1.99e-19,46;UBERON:0003080,5.20e-17,40;UBERON:0003056,6.16e-17,49;UBERON:0002020,6.21e-17,34;UBERON:0002780,5.05e-16,39;UBERON:0001890,5.05e-16,39;UBERON:0006240,5.05e-16,39;UBERON:0003528,7.09e-13,29;UBERON:0002791,7.09e-13,29;UBERON:0001893,7.09e-13,29;UBERON:0002021,5.15e-10,10;UBERON:0000411,5.15e-10,10;UBERON:0001950,5.15e-10,10;UBERON:0003076,2.18e-08,12;UBERON:0003057,2.18e-08,12;UBERON:0002420,2.23e-08,8;UBERON:0007245,2.23e-08,8;UBERON:0010009,2.23e-08,8;UBERON:0010011,2.23e-08,8;UBERON:0000454,2.23e-08,8;UBERON:0002410,3.42e-08,9;UBERON:0002619,9.18e-08,17;UBERON:0000010,1.61e-07,11;UBERON:0000956,8.17e-07,21;UBERON:0001869,8.17e-07,21;UBERON:0000203,8.17e-07,21|phase1_expression=3.20297694209588,0,0,0,0,0,0,0.258246646883153,0.84473233291,0.468129052643987,0,0,0.171200729931206,0.34968160967599,0.333109761815663,1.01237633694913,0,0.315462165358238,1.09691546884591,0.84877930359606,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,5.66486090406874,5.28990979272033,6.97214543856797,0,0,3.5995988691256,1.97773272513395,0,0,0.384218305321555,0.725827286159344,0.135005938331691,0,6.56997264128748,7.73039893330647,0.61245399607477,1.15014565221884,0,41.8440347797677,32.9433332259784,30.8749131845049,7.64940468835124,5.12330804173494,3.64639359389732,12.0048689570594,19.1339287410771,14.6686317865738,7.07108605136802,5.55249555116501,6.71038004971082,0.227178579999552,1.43585964202892,0,0.860423876981386,0,0,0,0.448026887097336,0.702222100658759,0,0,0,1.97180787687353,0,0,0,0.216491041011214,0,0,0.5709193985953,0,3.26572705942614,0.520455980298408,1.82679286987285,2.7673859670727,1.50722640552623,1.99900802130698,1.13099932196708,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0.484875253135222,0,19.9090941967852,32.0453461424586,0,0.11981512450592,0,0.127070227073065,26.3631525352488,5.03250663100489,3.8952849154988,14.6012428961512,8.95004100656157,33.8694512632083,18.9822277789276,0,0.373220911830279,0,0.631325567659422,0.390361328888111,1.14951052216736,2.16074555766419,2.10986744970001,1.76894897793452,0.512454881139399,1.21812241927647,0.517406741478031,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,2.52347938276953,2.36680608472354,0,0.264450566663544,0.426576501070468,0.928946687441754,0.38660238396628,0.201683524623343,0.444756087689741,0.760902504450237,0,0.329397909448022,0.251335208800269,0,0,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0.405720242777006,0,0,0,0.162135226775035,0.823684239564244,1.43768206527355,0.3721409476685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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=242662 | |||
|HGNC= | |||
|MCL_coexpression_id=189 | |||
|TSSclassifier=NA | |||
|UniProt=Q80U57 | |||
|association_with_transcript=28bp_to_ENSMUST00000071093_5end | |||
|cluster_id=chr4:120527452..120527472,+ | |||
|description=CAGE_peak_2_at_Rims3_5end | |||
|id=chr4:120527452..120527472,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.98e-14!33;CL:0000047!3.98e-14!33;CL:0000031!3.98e-14!33;CL:0000404!3.98e-14!33;CL:0000393!1.90e-09!39;CL:0000211!1.90e-09!39;CL:0000221!2.39e-09!44;CL:0000133!2.39e-09!44;CL:0000117!3.94e-09!23;CL:0000337!3.94e-09!23;CL:0002319!5.28e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.47e-19,33;CL:0000047,1.47e-19,33;CL:0000031,1.47e-19,33;CL:0000404,1.47e-19,33;CL:0000393,5.27e-15,39;CL:0000211,5.27e-15,39;CL:0000221,3.29e-14,44;CL:0000133,3.29e-14,44;CL:0002319,1.13e-13,43;CL:0000117,5.29e-12,23;CL:0000337,5.29e-12,23;CL:0000107,3.42e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.30e-25!75;UBERON:0001016!2.30e-25!75;UBERON:0001017!3.46e-25!73;UBERON:0005743!3.46e-25!73;UBERON:0004121!1.10e-23!102;UBERON:0000924!1.10e-23!102;UBERON:0006601!1.10e-23!102;UBERON:0002346!1.40e-23!71;UBERON:0003075!1.40e-23!71;UBERON:0007284!1.40e-23!71;UBERON:0000033!5.99e-18!63;UBERON:0001049!2.37e-17!52;UBERON:0005068!2.37e-17!52;UBERON:0006241!2.37e-17!52;UBERON:0007135!2.37e-17!52;UBERON:0000955!1.15e-16!50;UBERON:0006238!1.15e-16!50;UBERON:0002616!5.55e-16!49;UBERON:0003056!1.17e-14!49;UBERON:0003080!7.07e-13!40;UBERON:0002780!3.29e-12!39;UBERON:0001890!3.29e-12!39;UBERON:0006240!3.29e-12!39;UBERON:0002020!9.65e-12!34;UBERON:0007811!1.35e-10!86;UBERON:0002791!4.37e-09!29;UBERON:0003528!4.37e-09!29;UBERON:0001893!4.37e-09!29;UBERON:0000153!6.43e-08!94;UBERON:0002021!4.61e-07!10;UBERON:0000411!4.61e-07!10;UBERON:0001950!4.61e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.97e-37,73;UBERON:0001016,3.28e-37,75;UBERON:0004121,9.30e-32,95;UBERON:0000924,9.30e-32,95;UBERON:0006601,9.30e-32,95;UBERON:0002346,4.74e-27,64;UBERON:0003075,4.74e-27,64;UBERON:0007284,4.74e-27,64;UBERON:0000073,4.88e-27,54;UBERON:0001049,1.09e-24,52;UBERON:0005068,1.09e-24,52;UBERON:0006241,1.09e-24,52;UBERON:0007135,1.09e-24,52;UBERON:0010371,4.79e-24,73;UBERON:0010314,3.76e-21,92;UBERON:0000955,2.02e-20,47;UBERON:0006238,2.02e-20,47;UBERON:0002616,1.99e-19,46;UBERON:0003080,5.20e-17,40;UBERON:0003056,6.16e-17,49;UBERON:0002020,6.21e-17,34;UBERON:0002780,5.05e-16,39;UBERON:0001890,5.05e-16,39;UBERON:0006240,5.05e-16,39;UBERON:0003528,7.09e-13,29;UBERON:0002791,7.09e-13,29;UBERON:0001893,7.09e-13,29;UBERON:0002021,5.15e-10,10;UBERON:0000411,5.15e-10,10;UBERON:0001950,5.15e-10,10;UBERON:0003076,2.18e-08,12;UBERON:0003057,2.18e-08,12;UBERON:0002420,2.23e-08,8;UBERON:0007245,2.23e-08,8;UBERON:0010009,2.23e-08,8;UBERON:0010011,2.23e-08,8;UBERON:0000454,2.23e-08,8;UBERON:0002410,3.42e-08,9;UBERON:0002619,9.18e-08,17;UBERON:0000010,1.61e-07,11;UBERON:0000956,8.17e-07,21;UBERON:0001869,8.17e-07,21;UBERON:0000203,8.17e-07,21 | |||
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0.258246646883153,0.84473233291,0.468129052643987,0,0,0.171200729931206,0.34968160967599,0.333109761815663,1.01237633694913,0,0.315462165358238,1.09691546884591,0.84877930359606,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,5.66486090406874,5.28990979272033,6.97214543856797,0,0,3.5995988691256,1.97773272513395,0,0,0.384218305321555,0.725827286159344,0.135005938331691,0,6.56997264128748,7.73039893330647,0.61245399607477,1.15014565221884,0,41.8440347797677,32.9433332259784,30.8749131845049,7.64940468835124,5.12330804173494,3.64639359389732,12.0048689570594,19.1339287410771,14.6686317865738,7.07108605136802,5.55249555116501,6.71038004971082,0.227178579999552,1.43585964202892,0,0.860423876981386,0,0,0,0.448026887097336,0.702222100658759,0,0,0,1.97180787687353,0,0,0,0.216491041011214,0,0,0.5709193985953,0,3.26572705942614,0.520455980298408,1.82679286987285,2.7673859670727,1.50722640552623,1.99900802130698,1.13099932196708,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0.484875253135222,0,19.9090941967852,32.0453461424586,0,0.11981512450592,0,0.127070227073065,26.3631525352488,5.03250663100489,3.8952849154988,14.6012428961512,8.95004100656157,33.8694512632083,18.9822277789276,0,0.373220911830279,0,0.631325567659422,0.390361328888111,1.14951052216736,2.16074555766419,2.10986744970001,1.76894897793452,0.512454881139399,1.21812241927647,0.517406741478031,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,2.52347938276953,2.36680608472354,0,0.264450566663544,0.426576501070468,0.928946687441754,0.38660238396628,0.201683524623343,0.444756087689741,0.760902504450237,0,0.329397909448022,0.251335208800269,0,0,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0.405720242777006,0,0,0,0.162135226775035,0.823684239564244,1.43768206527355,0.372140947668503,1.5601883655728,0.505157755894224,0.538192240565737,0.964887042726734,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0,9.63303539926752,8.55645312123083,0,0,3.47059041357882,6.24701990874622,6.24727853425117,3.10659437338318,1.78238939265915,2.26461224631066,9.71545684019746,9.35218745316198,7.51046778098395,16.3873871375122,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,1.55056975900933,0.363533729477506,0.356497378384721,0,0,0,2.7235168460303,0.18006109403131,0.258717367565509,0.643011105094777,1.95074257006501,2.67553226403106,3.1264313914403,7.00269382963578,0,0,0,0,0,0,0,0,0,11.1255181206306,1.87957968877638,0,0,1.31857919903284,0.546776910884101,2.51655990527175,0.169978429993855,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0.598066184175915,0,1.94451188344048,1.42075805825504,1.18269287843545,0.117357238645754,0.781226309063701,1.25831213310853,0.483168241652012,0.288030006257865,0.316011120628178,0.202725215290164,0,0,0,0,0.360586348559907,0,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0,0,0,2.25900737046827,4.60325236507177,2.86447756719698,5.67115501734169,15.0718154349541,8.3093328712867,8.77529250301348,10.8077088773813,14.5005570874945,16.0505696643064,0.62272408550506,0.399024873401031,0.682934423016537,0.486213434136588,1.46729213839588,3.30918315210025,1.55572709461131,1.03017528619447,0.962757628775446,0.505394423527595,1.2673964994512,1.69763707247469,0.842773567228942,1.02440243847791,0.918967503289812,0.952587382566147,0.927074607558844,1.15745532278223,1.64834360321323,1.32479028120958,0.685738504770831,0.532427418478012,0.953744759789284,1.74415699958794,0.752875043322645,0.930760686808441,0.365855945745545,0.526139422875686,1.22223702461276,0,0.711810108745045,0.886540341380071,0,1.39443157067369,0.192906610981141,2.99772693525535,0.701794825336225,1.07435527024149,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p2@Rims3 | |||
}} |
Latest revision as of 06:57, 26 September 2015
Short description: | p2@Rims3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rims3_5end |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | 28bp_to_ENSMUST00000071093_5end |
EntrezGene: | Rims3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.47e-19 | 33 |
neuronal stem cell | 1.47e-19 | 33 |
neuroblast | 1.47e-19 | 33 |
electrically signaling cell | 1.47e-19 | 33 |
electrically responsive cell | 5.27e-15 | 39 |
electrically active cell | 5.27e-15 | 39 |
ectodermal cell | 3.29e-14 | 44 |
neurectodermal cell | 3.29e-14 | 44 |
neural cell | 1.13e-13 | 43 |
CNS neuron (sensu Vertebrata) | 5.29e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.29e-12 | 23 |
autonomic neuron | 3.42e-08 | 9 |