FFCP PHASE1:Mm9::chr4:119056337..119056385,-: Difference between revisions
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{{FFCP|EntrezGene=73332|HGNC=|MCL_coexpression_id=0|UniProt=Q8BVF4,A8WHU1,E9Q4C3|association_with_transcript=0bp_to_ENSMUST00000044781,ENSMUST00000084307,ENSMUST00000127474,ENSMUST00000170059_5end|description=CAGE_peak_1_at_Ccdc30_5end|id=chr4:119056337..119056385,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003135!1.50e-12!15;UBERON:0003101!9.08e-12!16;UBERON:0000079!9.08e-12!16;UBERON:0001301!1.27e-10!3;UBERON:0006555!1.27e-10!3;UBERON:0005103!1.27e-10!3;UBERON:0000083!1.27e-10!3;UBERON:0009201!1.27e-10!3;UBERON:0004819!1.27e-10!3;UBERON:0006553!1.27e-10!3;UBERON:0003074!1.27e-10!3;UBERON:0003060!1.27e-10!3;UBERON:0000473!5.64e-09!14;UBERON:0000080!3.43e-08!4;UBERON:0005904!3.43e-08!4;UBERON:0006947!3.43e-08!4;UBERON:0002120!3.43e-08!4;UBERON:0004054!3.43e-08!4;UBERON:0004875!3.43e-08!4;UBERON:0004876!3.43e-08!4;UBERON:0005721!3.43e-08!4;UBERON:0005754!3.43e-08!4;UBERON:0007297!3.43e-08!4;UBERON:0003133!7.75e-08!24;UBERON:0004176!1.99e-07!17;UBERON:0009196!1.99e-07!17;UBERON:0009117!1.99e-07!17;UBERON:0005156!3.14e-07!26;UBERON:0000990!3.14e-07!26;UBERON:0000991!5.02e-07!18;UBERON:0005564!5.02e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.07e-10,14;UBERON:0003135,1.32e-09,15;UBERON:0003101,4.76e-09,16;UBERON:0000079,4.76e-09,16;UBERON:0004176,1.48e-08,17;UBERON:0009196,1.48e-08,17;UBERON:0009117,1.48e-08,17;UBERON:0000991,4.05e-08,18;UBERON:0005564,4.05e-08,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,138.025259915186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3422199125164,0,0,0,0,0,0,0,0,0,0,19.4112595522402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1060.30641766496,0,0,0,0,0,0,0,0,244.724714396744,589.021362797335,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Ccdc30}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73332 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BVF4,A8WHU1,E9Q4C3 | |||
|association_with_transcript=0bp_to_ENSMUST00000044781,ENSMUST00000084307,ENSMUST00000127474,ENSMUST00000170059_5end | |||
|cluster_id=chr4:119056337..119056385,- | |||
|description=CAGE_peak_1_at_Ccdc30_5end | |||
|id=chr4:119056337..119056385,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.50e-12!15;UBERON:0003101!9.08e-12!16;UBERON:0000079!9.08e-12!16;UBERON:0001301!1.27e-10!3;UBERON:0006555!1.27e-10!3;UBERON:0005103!1.27e-10!3;UBERON:0000083!1.27e-10!3;UBERON:0009201!1.27e-10!3;UBERON:0004819!1.27e-10!3;UBERON:0006553!1.27e-10!3;UBERON:0003074!1.27e-10!3;UBERON:0003060!1.27e-10!3;UBERON:0000473!5.64e-09!14;UBERON:0000080!3.43e-08!4;UBERON:0005904!3.43e-08!4;UBERON:0006947!3.43e-08!4;UBERON:0002120!3.43e-08!4;UBERON:0004054!3.43e-08!4;UBERON:0004875!3.43e-08!4;UBERON:0004876!3.43e-08!4;UBERON:0005721!3.43e-08!4;UBERON:0005754!3.43e-08!4;UBERON:0007297!3.43e-08!4;UBERON:0003133!7.75e-08!24;UBERON:0004176!1.99e-07!17;UBERON:0009196!1.99e-07!17;UBERON:0009117!1.99e-07!17;UBERON:0005156!3.14e-07!26;UBERON:0000990!3.14e-07!26;UBERON:0000991!5.02e-07!18;UBERON:0005564!5.02e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.07e-10,14;UBERON:0003135,1.32e-09,15;UBERON:0003101,4.76e-09,16;UBERON:0000079,4.76e-09,16;UBERON:0004176,1.48e-08,17;UBERON:0009196,1.48e-08,17;UBERON:0009117,1.48e-08,17;UBERON:0000991,4.05e-08,18;UBERON:0005564,4.05e-08,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,138.025259915186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3422199125164,0,0,0,0,0,0,0,0,0,0,19.4112595522402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1060.30641766496,0,0,0,0,0,0,0,0,244.724714396744,589.021362797335,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Ccdc30 | |||
}} |
Latest revision as of 06:30, 26 September 2015
Short description: | p1@Ccdc30 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccdc30_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000044781, ENSMUST00000084307, ENSMUST00000127474, ENSMUST00000170059_5end |
EntrezGene: | Ccdc30 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 3.07e-10 | 14 |
male reproductive organ | 1.32e-09 | 15 |
male organism | 4.76e-09 | 16 |
male reproductive system | 4.76e-09 | 16 |
external genitalia | 1.48e-08 | 17 |
indifferent external genitalia | 1.48e-08 | 17 |
indifferent gonad | 1.48e-08 | 17 |
gonad | 4.05e-08 | 18 |
gonad primordium | 4.05e-08 | 18 |